BGIOSGA005103

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Revision as of 11:16, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA005103| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA005103, complete gene.| tag = OSJNBA0...")
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Gene Name

BGIOSGA005103

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA005103, complete gene.

LocusTag

OSJNBA0052O12.17

Ensembl Transcript ID

BGIOSGA005103-TA

Ensembl Protein ID

BGIOSGA005103-PA

Length

5796

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:44649982..44655777

Sequence Coding Region

44649982..44650096,44650500..44650594,44650746..44650859,44651000..44651104,44651195..44651266
,44651523..44651635,44651721..44651855,44651957..44652025,44652156..44652243
,44652343..44652414,44652492..44652592,44652852..44652969,44653070..44653129
,44653222..44653332,44653516..44653590,44653838..44653871,44654470..44654822
,44654988..44655042,44655169..44655237,44655380..44655438,44655541..44655777

Genome Context

<gbrowseImage1> name=IndicaChromosome01:44649982..44655777 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:44649982..44655777 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGGAGGCGGAGGCGGGGAGGAAGGAGAAGAAGGAGGTGGTGCGGCTGGAGCGCGAATCGGTGATCCCCATCATGAAGCCCAAGCTCATCATGAAGCTCGCCTACCTCATCGAACAACAATCTGACAGAGAAGAATTCTTGAAGCTCTGCAAGAGGATTGAGTACACCATTAGGGCCTGGTATCATCTCCAGTTTGATGATATGATGGAACTATTTGCTCTTTTTGACCCTGTTCATGGTGCCCAAAAACTGCAACAGCAGAATTTCTCGACTGAGGAAGTCGATACACTCGAGCAGAACTTCCTGACCTATTTCTTTCAGGTGATGCAAAAAAGCAATTTCAACATATTATCAGATGATGAGGTTGAGCTTGCTCATTCTGGACAATATCTGCTGAATCTTCCCATCAAAGTTGATGAAGCAAAGTTAGATAACAAACTTTTGTCAAAGTATTTTAAAGAGCACCATCACGACAACCTACCGGAGTTCTCAGATAAGTATGTCATATTCCGGAGGGGCATTGGACTGGATCGCACTAGCAACTTTTTCTTTATGGAGAAAGTGGACATGATCATAGCTCGTGCGTGGCGATGGTTCTTAGAGAAAACAAGACTGCAAAAGCTCTTCTCAAGAAAGAAAAGTGTTAGGCCAAAGACAGATTCCAAGAAGAATGATGATCTAGTTGGTGAAGAAGAGGACAAGGAGCTATATGTTGAACGCATACGACTTGAAACAATGAATTTGAGCTTGCGCAACTTAATTGGCAAGGTTACAATTCAAGAGCCTACATTTGAAGAGGTGATTGTCTTGTACAGGAGGAAAAGCCCTAAGGGCCAGAATGATAGATCAATTCATGTAAAGCACTTCAAAAATATTCCAATGGCAGATATGGAGCTGGTTTTGCCTGAGAAGAAAAATCCAAGCCTCACACCAATGGACTGGGTTCAGTTTATTGTTTCTGTTGTCATTGGACTTGTTACACTTGTCAGTTCGCTCGAAATGCCTAAAGCTGATTTCTGGGTTGTAGTTGCCGTCCTTTCTGCCCTGGCTGGATATTGTGCCAAGATCTATTTATCGTTTCAACAGAACATGGCAACATATCAAAACCTAATAACTCAATCAATGTATGACAAACAGCTAGATAGTGGGAAAGGCACACTTCTCCATCTCTGTGATGATGTGATTCAGCAGGAAGTCAAGGAGGTTATAATTTCCTACTATATTTTGATGGAAAATGGAAAGGCGACTATTGAGGATCTTGACTTACAATGTGAAGAGTTAATCCAAGAAGAGTTTGGCTTGCAATGCAATTTTGAGGTGATGGATGCTGTTCAGAAGTTAGAGAGGCTTGGCATCATTACAAGAGATTCTATTGGAAGAATATGCTGTCTATCTCTGAAGCGTGCCAATGAGATCATTGGCGCTACTACAGAAGAGCTGGACCTGCTGTATTATGCAATGTTTAATGCATGTTCAAAGTATAAGTGCAGCAGCAGCTACCAGCTAAGCAAGAAGCGAGCAGCAGAGCTCAGCGTTTGGAGCGAGATGATGAGCAGCAGCAGCAGCTTGGTGTCCGCCATTTCTGCGTCACCGTCTGCCACTGCAAAAGCTCGCCTTCGTCATGACGATGCAGCAACAGCAACAGGAGCAGCAGCAGCAGCAGCAGTAGCAGCGAGGCAGCTAAAGACGGAGCATGGCGGCTGCTGCTGCTGCCGGAGCAGAGGCCGGGCGGTGGTGGCGAGGGCGGGGCCCGGGCCACTGACGGAGATCGAGCCCGACCTGAACGAGGACCCCATTGATAAGTGGCGCACCAACGGCGTCAGCCCGGACGACTTCGAGTATGGAGTGTATGATGGTCACCACACCTATAATGAAACCCAAGATAAGAAGGGCTTTTGGGAGGATGTCTCTGAGTGGTACCAAGAAGCTGAACCTCCTCAGGGCTTCCAAGCACTGATCTCCTGGTTGTTTCCTCCTGCAATCATCCTTGGCATGGCCTTCAATGTTCCGGGGGAGTACCTCTACATCGGCGCAGCAGTGTTCGTCGTCGTGTTCTGCGTTATCGAGATGGACAAACCAGACAAGCCACACAACTTTGAGCCGGAGATCTACATGATGGAGAGATCGGCTCGCGACAAGCTCATCGCCGACTACAACACCATGGACATCTGGGACTTCAACGAGAAGTACGGCGAGCTCTGGGACTTCACCGTCGACAGAAGAGATGAGATTGTGAAATCGTCTTAG</cdnaseq>

Protein Sequence

<aaseq>MAEAEAGRKEKKEVVRLERESVIPIMKPKLIMKLAYLIEQQSDREEFLKLCKRIEYTIRAWYHLQFDDMMELFALFDPVHGAQKLQQQNFSTEEVDTLEQNFLTYFFQVMQKSNFNILSDDEVELAHSGQYLLNLPIKVDEAKLDNKLLSKYFKEHHHDNLPEFSDKYVIFRRGIGLDRTSNFFFMEKVDMIIARAWRWFLEKTRLQKLFSRKKSVRPKTDSKKNDDLVGEEEDKELYVERIRLETMNLSLRNLIGKVTIQEPTFEEVIVLYRRKSPKGQNDRSIHVKHFKNIPMADMELVLPEKKNPSLTPMDWVQFIVSVVIGLVTLVSSLEMPKADFWVVVAVLSALAGYCAKIYLSFQQNMATYQNLITQSMYDKQLDSGKGTLLHLCDDVIQQEVKEVIISYYILMENGKATIEDLDLQCEELIQEEFGLQCNFEVMDAVQKLERLGIITRDSIGRICCLSLKRANEIIGATTEELDLLYYAMFNACSKYKCSSSYQLSKKRAAELSVWSEMMSSSSSLVSAISASPSATAKARLRHDDAATATGAAAAAAVAARQLKTEHGGCCCCRSRGRAVVARAGPGPLTEIEPDLNEDPIDKWRTNGVSPDDFEYGVYDGHHTYNETQDKKGFWEDVSEWYQEAEPPQGFQALISWLFPPAIILGMAFNVPGEYLYIGAAVFVVVFCVIEMDKPDKPHNFEPEIYMMERSARDKLIADYNTMDIWDFNEKYGELWDFTVDRRDEIVKSS</aaseq>

Gene Sequence

<dnaseqindica>1..115#519..613#765..878#1019..1123#1214..1285#1542..1654#1740..1874#1976..2044#2175..2262#2362..2433#2511..2611#2871..2988#3089..3148#3241..3351#3535..3609#3857..3890#4489..4841#5007..5061#5188..5256#5399..5457#5560..5796#ATGGCGGAGGCGGAGGCGGGGAGGAAGGAGAAGAAGGAGGTGGTGCGGCTGGAGCGCGAATCGGTGATCCCCATCATGAAGCCCAAGCTCATCATGAAGCTCGCCTACCTCATCGGTAATGCGACCTACCTCTCTCTCCCCCTACTTCTTCGAAGACATGTTCTGTTTTTAGTATGATCCGATTGCTATCACGAAGCTGTCTCGTGAGAATCTTGCCCCTTCTTAATCTGAAGGAAAGAAGGGATCTTGCGTTGGTTGATTGATTCACTGTTTACGTGTAAAAATGGAATGTGGTTAGAGAAATCATCTGAATCGTTGGCATTGCAATTCAGTCTTAGGCTTTACCTAATGCCCACAATAATAGTGCAGTATTAGTAATGTGGCGTTGAGCATATCATGCCAAGTGTTCCAGCTTTCTTAGTTTCTACATTTTGAAGCAAAATTAGTCTTTCTGGATATATGAGGAGACTGTACTACTACTTACTGAAATTTAAAAACTGTTTACCTGTTTCTGGAAGAACAACAATCTGACAGAGAAGAATTCTTGAAGCTCTGCAAGAGGATTGAGTACACCATTAGGGCCTGGTATCATCTCCAGTTTGATGATATGATGGTGAGAGCTTGCATTCGTTACTGAAGTCCTGTTCTCCATACATTTTCTTTTATGGACTTGATGGAGCTTATGACCATCATTAAGATCTGCTGATTTCTGGCAGTGTTTCACAATGTGATCTGATCTGTCAGAACTGCTATAATTTCCACAGGAACTATTTGCTCTTTTTGACCCTGTTCATGGTGCCCAAAAACTGCAACAGCAGAATTTCTCGACTGAGGAAGTCGATACACTCGAGCAGAACTTCCTGACCTATTTCTTTCAGGTAAACAAACTGTTTGGGAGATGGAACTATTATATGTCTCAACTACACATGAATGATCAGGATATTTCTTAATAAGTATTACAAGGGACCCAGATATATCCACAATATTACACAATAAATTGTATGAAATCTTGGTGCAGGTGATGCAAAAAAGCAATTTCAACATATTATCAGATGATGAGGTTGAGCTTGCTCATTCTGGACAATATCTGCTGAATCTTCCCATCAAAGTTGATGAAGCAAAGGTTAACATCCTCTCCCTCCAGGCTGTGTCCTAATCTAAAAATCATTGGATTTGACAATATTATTGTAAAATTTGTTTTTTACTGGTGCAGTTAGATAACAAACTTTTGTCAAAGTATTTTAAAGAGCACCATCACGACAACCTACCGGAGTTCTCAGATAAGGTGAGTAGCTAACATTATGTTCTGTCTTTTACATCTCTTCAGTGTTATCTATCAGAATATTTGTTTATAAAAGATGAGAAAGATGGTTTTGAAGTGGTGTAATTGATGGTTAGCCAGTGTATTCCTTTTTTTCATGTGTTGTTAGTGTAGCAGAACTGGATGCTTGCCCTCCTAATGACCGTGTGCTGTGGCCAAGTCATCCTCAAATATTGTTCCTGAACCATATGCACACCTAATATAATCTTTTATATGCCAGTATGTCATATTCCGGAGGGGCATTGGACTGGATCGCACTAGCAACTTTTTCTTTATGGAGAAAGTGGACATGATCATAGCTCGTGCGTGGCGATGGTTCTTAGAGAAAACAAGGTGCGCTATCCACTACATATGTATTTTCATGTCCATTTTATCTTGATCGTCCAAAAGATTAACTATTTTCACAATGAAATTTTAGACTGCAAAAGCTCTTCTCAAGAAAGAAAAGTGTTAGGCCAAAGACAGATTCCAAGAAGAATGATGATCTAGTTGGTGAAGAAGAGGACAAGGAGCTATATGTTGAACGCATACGACTTGAAACAATGAATTTGAGGTTTGTGCTATTCTTGACCTTTTAGGCCATCACAGTTCCTGAAAACTTTCTATTGCTTGTCTTCTCCACTCATATTTGATATTTCCTTCCTTGTTCTGTAGCTTGCGCAACTTAATTGGCAAGGTTACAATTCAAGAGCCTACATTTGAAGAGGTGATTGTCTTGTACAGGTAAGTCCCGTAAATTATTTGCATCTGAGGATGCAGGAAACCTTTTTCGGGTGCGCCCTGGTTGTGAATTGGCTGCTTTCATGATGTCTTGAACTACTGTGTTATAACTGATTTCTGACTGTTCTTTCAGGAGGAAAAGCCCTAAGGGCCAGAATGATAGATCAATTCATGTAAAGCACTTCAAAAATATTCCAATGGCAGATATGGAGCTGGTTTTGGTAAGTGTAGAAGCTTAATATGCCAAAGAATAATGTGGTGACATCCATATTGCTTTCTTCAATTGGACTTATGCTGAAGAGAAATTATGACTGTTGCAGCCTGAGAAGAAAAATCCAAGCCTCACACCAATGGACTGGGTTCAGTTTATTGTTTCTGTTGTCATTGGACTTGTAAGTGGACTGGAACTGGTTGCACTTGATTGGGTTGTGATTCATCACCTGATGATTATTTTTTTCACATTGCTCAGGTTACACTTGTCAGTTCGCTCGAAATGCCTAAAGCTGATTTCTGGGTTGTAGTTGCCGTCCTTTCTGCCCTGGCTGGATATTGTGCCAAGATCTATTTATCGTGAGTGCCTTGGTTGATATATTTGTTTTGATTGGGTATTCGTCTTGTCATCTTGTCGGTAATCTGCATTGTGTATATAATAGAGCAGGGACAGGGAGGATTTTTGTTTACTCATCCAGCCAGAATTACTTTAGAATACCTCCATAAAATGCAGTTTTGCTTCCCTGATTCCTTCAGCATTTTCTTATTTATGATGATACTTTATTTTCTGTATTGGTTGTATTGGACAAATTTGGTAAATAAGCTACCTTTGATGCAGGTTTCAACAGAACATGGCAACATATCAAAACCTAATAACTCAATCAATGTATGACAAACAGCTAGATAGTGGGAAAGGCACACTTCTCCATCTCTGTGATGATGTGATTCAGCAGGAAGTAGGTCTCCATATTGTAGTACTTGATTCAGAATAAGCATATCAGAGACTTGTGCTCACAATTATTTTCATCTTTGTGGTTTCTGAATTCTGATGTCCAGGTCAAGGAGGTTATAATTTCCTACTATATTTTGATGGAAAATGGAAAGGCGACTATTGAGGTATTGCTTTGGTATTTGAAACAAGCATGTTTTGTTTCTGAAGTTGTGCAAGTATAAAAATTGAGTTGAATATTCTTGGCTCTCAATGCTAGGATCTTGACTTACAATGTGAAGAGTTAATCCAAGAAGAGTTTGGCTTGCAATGCAATTTTGAGGTGATGGATGCTGTTCAGAAGTTAGAGAGGCTTGGCATCATTACAAGAGTGAGTTCTTACAGCTTGTTACAGCAGTACCAAATCATAGTGAGATATATATCCCCAAAAAAAAACTTAGATAAATTTCAGAATGTATAGAATCTAAAAGAATTTTTAAATGAAATACCATTATGTTGTTACTCGCATTTTCTCTATTTTAATCATGGATAATAAAGCCAGTGATGCTTGCAGGATTCTATTGGAAGAATATGCTGTCTATCTCTGAAGCGTGCCAATGAGATCATTGGCGCTACTACAGAAGAGCTGGTTATGAAGGCCAGACAAAGCTAGTTATCCAATTCTATTTGAACCAGGTAATCCTTTGGTGGACTCTAGGCTTCCATCATTAGATTGTTTCTGGTTTTTTGGATGGGACATTATATTGTTTCTGGAATACTCCAAGAAGTCCTGACACTGATTTCTTTGCAGTTTAGGGGTGCAATAGGTCCTGGACGGCTGCGGAATAATTCTGCGATGGAAGTTGAGCAGATATGCTATTGTTGTTCTGTTGTAGGACCTGCTGTATTATGCAATGTTTAATGCATGTTGTAAGAAATTTAATTTCTTCTTGGAACAAAATGTGGAAAGATTTCAGTAAAAAAAAATGTGGAAAGAGGTTCATGAACTGCTGCCTTGTTTGTTCAGTTAATGAATACTCCTACAAGAAATGCAGCAGCCTGCTAACTCAAGGCACAAGAGCCAAGTATGACGCATAAAAAGCATACTGAAGCAGTGAAAAAGCGCTGCTGATGGTGCACTGTATCTCAGCCACTGAATCAGTGACGTCCGACACAGTGACACTGGGTTGCTGGTTCTTTTTCTGCTCTTTTCATTTACAAATCATGTCCTCATGTTGCAGTTGTCTTTTCCTTGTCTCTCCTGATGTGTAAAACACAAGGCTCTGTGCTTGCTGTTGCTAACAATTCAGATTCATCAGAATGCAATAATGTAGTACTAACAAATACTAGTTCTATTCATTCACAAGATTATCATGCATATCTGACCTGATTACTGACTGACTAATGAGGTGATGCAGATTTCTTTCCAGGCATGAAGAAAAAGAAAGAAAAGAGGAAAAAAGCAGCGAAAAATCCTGGACGGTACATGCCCCATACCCATTATCCTCTTGTTTTTGTCTCCTTGCAGCAAAGTATAAGTGCAGCAGCAGCTACCAGCTAAGCAAGAAGCGAGCAGCAGAGCTCAGCGTTTGGAGCGAGATGATGAGCAGCAGCAGCAGCTTGGTGTCCGCCATTTCTGCGTCACCGTCTGCCACTGCAAAAGCTCGCCTTCGTCATGACGATGCAGCAACAGCAACAGGAGCAGCAGCAGCAGCAGCAGTAGCAGCGAGGCAGCTAAAGACGGAGCATGGCGGCTGCTGCTGCTGCCGGAGCAGAGGCCGGGCGGTGGTGGCGAGGGCGGGGCCCGGGCCACTGACGGAGATCGAGCCCGACCTGAACGAGGACCCCATTGATAAGTGGCGCACCAACGGCGTCAGCCCGGTCTGTCCTCCTCGCCATCGCCGGCCACCGTGTTGAGAATTTCATTATTTTTCTCTATTCCAAGCAGTTTCCATGGTTTCTTTGATTCTTTCTTCAGTGATTGCTGCTGCTGTGCTGTGTTGTCTGAAGAAATGGTTTTGACACTGAAAAGAATCTGCTTTGCAGGACGACTTCGAGTATGGAGTGTATGATGGTCACCACACCTATAATGAAACCCAAGGTTCTTTTTCTGGGCTATCTTATCCAGTTATCCATTCCTTGAATCGAAATGCGTAATCATGCTCGTGTGCTAATTTCTGATTCTTATGTGATATGATGTGGAAAAAAAAATCATTTGACACTGAAGATAAGAAGGGCTTTTGGGAGGATGTCTCTGAGTGGTACCAAGAAGCTGAACCTCCTCAGGGCTTCCAAGGTAGTAACAGCCAAATTCCTTTCTCACTTGGATAAATCAGAGAAAAATCAGATTCTTTCAGATAAATCAGAGAAAAAAAATCAGATCTTTCTTCTCTTAAGACAAGCTTGCTCAATTTGCACTGATGGGCCATCTCTTGCAGCACTGATCTCCTGGTTGTTTCCTCCTGCAATCATCCTTGGCATGGCCTTCAATGTTCCGGTAACATATTGAGCAGTAGTTCCAGCCTACTGACATGTATCACATTTCACAATCTGTCTTGGCTCTTGAGCTCTCTGAATATGTGTCTACTTCTGCCACTAGGGGGAGTACCTCTACATCGGCGCAGCAGTGTTCGTCGTCGTGTTCTGCGTTATCGAGATGGACAAACCAGACAAGCCACACAACTTTGAGCCGGAGATCTACATGATGGAGAGATCGGCTCGCGACAAGCTCATCGCCGACTACAACACCATGGACATCTGGGACTTCAACGAGAAGTACGGCGAGCTCTGGGACTTCACCGTCGACAGAAGAGATGAGATTGTGAAATCGTCTTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA005103