BGIOSGA005107

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Revision as of 11:16, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA005107| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA005107, complete gene.| tag = OsI_050...")
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Gene Name

BGIOSGA005107

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA005107, complete gene.

LocusTag

OsI_05051

Ensembl Transcript ID

BGIOSGA005107-TA

Ensembl Protein ID

BGIOSGA005107-PA

Length

5720

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:44723355..44729074

Sequence Coding Region

44723355..44723492,44723639..44723702,44724036..44724094,44724305..44724380,44724478..44724549
,44726344..44726431,44726942..44727200,44727286..44727401,44727489..44727703
,44728397..44728525,44728640..44728727,44728840..44729074

Genome Context

<gbrowseImage1> name=IndicaChromosome01:44723355..44729074 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:44723355..44729074 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCTGCAGCCATTGCCGTCGTCTACCTCTCCCTACTGCTGCTGCTGCTGCATGGCGCGGCGCCTGCAGTTCTTGGCTACACGCGAGGGGATTTCCCGGAGGATTTCGTCTTCGGATCCGCCACCTCGTCGTACCAGTATGAGGGTGGTTTTGATGAGGATGGTAGGAGCCCAAGCAACTGGGACATCTTCACTCATCAAGGGAAAATGCCGGGCAGAAGCACAGCTGATGTCGCCGCCGACGGGTACCACAAGTACAAAGATGATTTGAAGCTGATGGTTGACACTAACCTAGAGGCTTATAGATTATCCATCTCCTGGTCGAGGATTATTCCAAATGGGAGGGGTGATGTCAATCCAAAAGGGCTACAATACTACAATGACATCATAGATGGGCTAGTGAAAAATGGGATTCAAGTCCATATCATGCTTTATCAGTTGGACCTACCTCAGGTTCTGGAAGACGAGTACGATGGATGGTTGAGTCCGAGAATTTTGGAGGATTTCAAAGCATATGCAGATGTGTGCTTCAAGGAGTTTGGAGACAGGGTTGCACACTGGATTACAATTGATGAACCTAATGTTGCTTCAATTGGGTCTTATGATTCCGGACAATTGGCCCCTGGGCGTTGCTCTGATCCTTTTGGAATAAGAAAATGTACAGTAGGGAACTCATCTGTGGAGCCATATATAGCAGTTCATAACATGTTACTGGCACATGCATCAGTCACAAAACTGTACAGAGAAAAATACCAAGTCGCAGGAAAAGGAATTATCGGCATAAGTGTTTACACATTTTGGGCTTATCCATTAACAAATTCTACTGTCGATTTAGAAGCAACAAAAAGATGTCAGGACTTTATTGTCCACTGGGTACTAAGACCCTTGGTATTCGGTGATTACCCACAAGTAATGAAGAACATTGTCGGTTCTCGCCTTCCATCCTTCACAAAAGCCCAATCTGAAGATGTCAAGGGTTCTCTAGATTTCATTGGAATGAATCACTACTACTCTCTCTATGTGAATGATCGTCCTTTGGGTAAGGGCACACGCGACTTTGTAGCGGATATGTCAATTTACTACAGAGATCTTATTTTTTATTGCGGAGCGCAGGCCGCTCCAACATCTATTGGACCTGACCCACAAGGATTGAGATTGATGGTGCAGTACCTACAAGAAACCTATGGGAACCTTCCCATTTATATCCTCGAGAATGGTTATGGATCAAGCAATGACACTGTCCATGACAATGACAGGGTTGATTACCTGAAGAGCTATATAGGGAGTATCCTGACTGCACTAAGGAATGGCGCCAACGTGAAAGGCTACTTCGTGTGGTCATTCGTGGACGTGTTCGAGTACCTGACGGGGTACGGCCAATCGTACGGCCTCTACCGCGTCGACTTCGCCGACGAGTCGCGGCCGCGGCAGGCGAGGCTCTCCGCTCGCTGGTACTCCGGCTTCCTCAAGAACAGGGAGCTGGATGTTGATCAGAGTGAACTCGCCATGGCAGCAGCAGAGTCACGAGCTCAGCAATGA</cdnaseq>

Protein Sequence

<aaseq>MAAAIAVVYLSLLLLLLHGAAPAVLGYTRGDFPEDFVFGSATSSYQYEGGFDEDGRSPSNWDIFTHQGKMPGRSTADVAADGYHKYKDDLKLMVDTNLEAYRLSISWSRIIPNGRGDVNPKGLQYYNDIIDGLVKNGIQVHIMLYQLDLPQVLEDEYDGWLSPRILEDFKAYADVCFKEFGDRVAHWITIDEPNVASIGSYDSGQLAPGRCSDPFGIRKCTVGNSSVEPYIAVHNMLLAHASVTKLYREKYQVAGKGIIGISVYTFWAYPLTNSTVDLEATKRCQDFIVHWVLRPLVFGDYPQVMKNIVGSRLPSFTKAQSEDVKGSLDFIGMNHYYSLYVNDRPLGKGTRDFVADMSIYYRDLIFYCGAQAAPTSIGPDPQGLRLMVQYLQETYGNLPIYILENGYGSSNDTVHDNDRVDYLKSYIGSILTALRNGANVKGYFVWSFVDVFEYLTGYGQSYGLYRVDFADESRPRQARLSARWYSGFLKNRELDVDQSELAMAAAESRAQQ</aaseq>

Gene Sequence

<dnaseqindica>1..138#285..348#682..740#951..1026#1124..1195#2990..3077#3588..3846#3932..4047#4135..4349#5043..5171#5286..5373#5486..5720#ATGGCTGCAGCCATTGCCGTCGTCTACCTCTCCCTACTGCTGCTGCTGCTGCATGGCGCGGCGCCTGCAGTTCTTGGCTACACGCGAGGGGATTTCCCGGAGGATTTCGTCTTCGGATCCGCCACCTCGTCGTACCAGGTAGTAGCAAGTAGCAACTCACGCAGCTTCGGTTGGAGCGAGATCTTCTTGGCTATCAGCTGGTTCTTGTTTTCATTTGAGAATTTCTACTGGGCTCTATGAAATTCTGATTGTTTTGGGTGGTGAAATTTTTGTCTGTCTGGTAGTATGAGGGTGGTTTTGATGAGGATGGTAGGAGCCCAAGCAACTGGGACATCTTCACTCATCAAGGTAATTAACTGACAAGGCTGGGATTCTGCCCTTGTTTTTTTTTTACAAATACTCCCTCCGTTTCTAAATATTTGGCACTGTTAAATTTTTAAGCACATGTTTGATCGTTCGTCTTATTCAAAAACTTTTGTGAAATATGTAAAACTATATGTATACATAAAAATATATTTAACAATGATAGAAAAATAATTAATAATTACTTAAATTTTTTTAATAAGACGAACGGTTAAATATGTTTAAAAAAGTCAACGGCGACAAATATTTAAAAACGGATGGAGTATATGTTCTTGTGTGACAAATATCTAAAAATGATGTTCTTGTTTGTGATAACAGGGAAAATGCCGGGCAGAAGCACAGCTGATGTCGCCGCCGACGGGTACCACAAGTACAAAGTATAGCTCAATTTTCTCTGGATGTAAATCCTCTTATCAATTTATCTGCTATATTGTACCTGAAGATTTGTGGCTTCTGTCTGATCTGTCCTCAACTCAATGTCTGGAAGGAAAAATATTCAGATGTCATGGCCAAGTACTTTGATGTTCTGAAATGAAAGCTCTAACCTGTTTTAAGTTGTTTTGACATGATTTATTATGATGGTTCAGGATGATTTGAAGCTGATGGTTGACACTAACCTAGAGGCTTATAGATTATCCATCTCCTGGTCGAGGATTATTCCAAGTATGAGCATTTCAGAAGATTTTTTATTGTTGTACTTGTATGCAAGAATTTTCAACATTATTTCTAATTTCTTGTTTTTGAAACTAACGTTTTTCAGATGGGAGGGGTGATGTCAATCCAAAAGGGCTACAATACTACAATGACATCATAGATGGGCTAGTGAAAAATGGTATGCCTATTTGCATTAACCTATGAAGTTTTGGTGTATTCCCTCTCTGGTACCATAATTCTTAATGTTTTGGACAATGACATAGTCTCCAAATATATGTTTGACTATGTTTTTTTATTATAATACTGAAAAAAATGCCTGTGCGTTGCAATGGGTAAAGACGTTTTTTTAGTCTTATATTAAGAAATGATCAATAAATTAAAATATTGGGATCGCTATGCATTATAATTGAAAAAGTTAATGAAAATCTTTCCTGGGTTTTGAGCCGAAAGCCTTCCTTCCTTTTTTTAGCCCTAGTGCAGTCCGCTCCCTCCATCCGTTTGGCCTGCTTCCCTTCGACCCAGCCACAAGTGGAGCTGTAAGCCCAACTTCCTCCCGAAGTCCCGTACGCGTAAGCCCAACTCTCTCCCGAAGATAGTCCCTCCCTCCGTTTGGCCTGCTTCCCTTCGACCCAGCCACAAGTGGAGCCGTAAACCCAACTACCTCCCAAAGTCCCGTACGCGTAACCCAACTCCCTCCAGAAGATAATCCTGTGCCCGTACGGTTGTCGGAGCAAATCTCCCCATCAAATTCGGCCGAATCTTTCTCAATCACCCAAAATTGCTTGAGGGTTATCGATCCACTCGATCTTCTCTTCCTGTTTTTTTCCAATATCAGAGCGTAGAACTCAGGATAAAAATGACCAGGAAAGATTGCCGTCATCATCCAATTGAGGGTTTTCGATCCAGATTGTCGTCATCATCCAATATTGGTTGAGGGTTTTCGATCCACTCGATCTCCTCTTTTCGTTTTTTCCAAAACATAAAACTCAGGATAAAACGACCGATGAAGATCGCTGTCATCATCGGCAACTCTTAGATGGAGATTAAATCTAACGAATTACAGACGAATCAAAAGAGAAAATCATCGAGAAAATGATGGGAGAGGAGTAGCGAATTCATTTTTACAATAAAATTGGAGGAGGAAACGCACTATCAATATGACGGCGGCACGGCGCCAGGGTTCAACTCGGGAGACGTGCAGCTAAAACAAATCGGATTAAAAAACCGGATGAAAAAACCAAAAGCACACAGGAGGTGCGTGGTGAACAGATCGGATTAAAAAAACCGGACAAGAAAAACCAAGAGCCTTAGCGCGTGCGAAAAAAAACTCTTTCACGTGCAAAAAAAAATGGAAAAAAATACTGGTGTCAATAAAAACCAAATGGACTTTTTTTTACTGGCGAGAACTTTTTTTTCCTTTTATTTGGGGGAGTCGGGTAATTTTTTTATGACATTGTTTTTTTCATGGATGGCTTTTTTTTATCGCTTTTTGAGTCGGACTTTTTTTTACGTTTTTGCGTCGGGCTTTTTTTTTTCTTTTTTACAGACAACGAAATTTGCTGGTTCTTTTTGAGGAGTAGAGATAAAGATTAAAATTGAAACATAAAATTAAAACCGATTCAAACACGGATGACGTACCAAAGTACTGGTAACAACATCTTTAATTTTTATAATAGTAGAGATATACAATAAATAAATATATTTTTACTTTTATTATAGTACTTTGTAAGACATATATATTGTTCTAGTGACTTTAAACTAAATATTTATAAAGCTATTGATAGTCAAAATTATAAAAGTTTGACCTTAATCATATCTGAAACGTCCAGAATTATGGAACCGGAGGGAGTAGTGGTGAATGGTGACAAAACACCTTTTACAATCTAAAACTTAAATAATGGAAATTCGTTTCACACATTTTGACCTTTTTGTTGCACTGTTTTAAACCCTATGGCATTTTCAATTTCTTCAGGGATTCAAGTCCATATCATGCTTTATCAGTTGGACCTACCTCAGGTTCTGGAAGACGAGTACGATGGATGGTTGAGTCCGAGAATTTTGTAAGACCCCTTAACTTTCTCTTGTGCTGATAGTATTGCTCTGAAGTTCATCTTGTCCAATTCTAGTTCGTAAACTTTGAACATTAATAACTAAAATTATAAGCATATTTGGCATGTAAAACTATATAAAAAAATATACTTCAATGCATTTTTATAATATTTTTTTGAACGACCCACACTACAAATATTATATAATATTGGTCTTGTAGACATTAACAAAATAGTTTATGAGTACTAACCGTCAAAGTTTATACAATTTGACTATTTGACTTTATAGTACGCCTTATAAAAACAAATAGAGGGAGTATATAAACAAACTTGTTGGGCACAACAAAGTACTCAATGAATTAACGGCTTTACAAAAAACTAAAAGAGATGCTCCAGGGGCCCAGCGACAGGGAATTGAGCGAATTGATCATAGGATGTTATAGAAATGATCACAAGTTACCTAGTGATATTTCATAGAGAGTGGACCTGAAATCCTAATCTCCAGTGTCACTGCAAACGCAGGGAGGATTTCAAAGCATATGCAGATGTGTGCTTCAAGGAGTTTGGAGACAGGGTTGCACACTGGATTACAATTGATGAACCTAATGTTGCTTCAATTGGGTCTTATGATTCCGGACAATTGGCCCCTGGGCGTTGCTCTGATCCTTTTGGAATAAGAAAATGTACAGTAGGGAACTCATCTGTGGAGCCATATATAGCAGTTCATAACATGTTACTGGCACATGCATCAGTCACAAAACTGTACAGAGAAAAATACCAAGTGAGTTATCATGTATTCAGAATTAGTAGTAGCATTGTTCAATTGGCCAAATCTTTATGTGTTCATAAAAGAGTTTTACATATAGGTCGCAGGAAAAGGAATTATCGGCATAAGTGTTTACACATTTTGGGCTTATCCATTAACAAATTCTACTGTCGATTTAGAAGCAACAAAAAGATGTCAGGACTTTATTGTCCACTGGTATGTCATGTTGACTCTTTATGTTTGCATCTGAATATTAATGTGAAAAAATAGATGGGGCAAACAGAGTTGTGGTGCTCTTTCTAGGGTACTAAGACCCTTGGTATTCGGTGATTACCCACAAGTAATGAAGAACATTGTCGGTTCTCGCCTTCCATCCTTCACAAAAGCCCAATCTGAAGATGTCAAGGGTTCTCTAGATTTCATTGGAATGAATCACTACTACTCTCTCTATGTGAATGATCGTCCTTTGGGTAAGGGCACACGCGACTTTGTAGCGGATATGTCAATTTACTACAGAGGTAAGAACTTTTCTGTCGATGAAGGCATTATTGGCTTATTGCTGCACTGCACTTCCCCAGTCATAGGAGCAGGAATTTTTGGTACATTTGTCTAGCAGTAATATCTTCCTTTCAAAGAACTACTAGCAACAACACATAATCAAATACTCCTACAATCTTATGAAATCTACTCATTCCGTTTCATATTATAAGACTTTCTAGCATTGCCTATATTTATATATATGTTAATGAATCTAGACATATATATGTGTTTAGATTTATTAACATCGATATGAATATGAGCAATGCTAGAAAGTCTTATAATATGAAATGGGGGGAGTATGTATATATATGTGTTTAGATTTATTAACATCTATATAAATATAAGCAATGCTAGAAAGCCTTATAATATGAAATGGGGGGAGTATGTAGCATGTGCAAAATCTAATCAAATCCCTCTGATTCAGGTTCCAAGACAGATCCACCACCTGGTAAGGTATGGTTTCCCATCGATGTCTGTTAGATATGCTGCTGTGTTGAACTGTTTCAAACCTGAAAAATACCAAAATAGGAATTTTCATCTAATTCAACATATTAAAAGCAAATATGCAATACACACTTAAAAAAGATAATACAGTTTACACACTTAAAAAAGATAATACAATTTGGAAGGAACAAAATTGCACCCATTATTCGAGCTGTGAGTTGTGACAGATCTTATTTTTTATTGCGGAGCGCAGGCCGCTCCAACATCTATTGGACCTGACCCACAAGGATTGAGATTGATGGTGCAGTACCTACAAGAAACCTATGGGAACCTTCCCATTTATATCCTCGAGAATGGCAAGTTATTTGTTGTGGTTCAGTTACTCCACTGAAAATTTGCCAATGTTTATGCAGACTTGTACTGTTCTTTTTTACCTTACATATTTGGTTTCTCTTCGCCCTTCTCTTCAGGTTATGGATCAAGCAATGACACTGTCCATGACAATGACAGGGTTGATTACCTGAAGAGCTATATAGGGAGTATCCTGACTGCACTAAGGTGAAAACATCGCCAAAAAGAGGAAACAGATCGGATAATTTTCAGGCAAATGCTTTGCAGTTTGCTCTGAAATTCTTCAGACATTTTGATCAGGAAGAACTCCTCTCTGCAGGAATGGCGCCAACGTGAAAGGCTACTTCGTGTGGTCATTCGTGGACGTGTTCGAGTACCTGACGGGGTACGGCCAATCGTACGGCCTCTACCGCGTCGACTTCGCCGACGAGTCGCGGCCGCGGCAGGCGAGGCTCTCCGCTCGCTGGTACTCCGGCTTCCTCAAGAACAGGGAGCTGGATGTTGATCAGAGTGAACTCGCCATGGCAGCAGCAGAGTCACGAGCTCAGCAATGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA005107

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA005107&oldid=42831"