Os11g0544000

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Revision as of 09:12, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os11g0544000| Description = Conserved hypothetical protein| Version = NM_001074581.1 GI:115485810 GeneID:4350679| Length = 3360 bp| Definition ...")
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Gene Name

Os11g0544000

Description

Conserved hypothetical protein

Version

NM_001074581.1 GI:115485810 GeneID:4350679

Length

3360 bp

Definition

Oryza sativa Japonica Group Os11g0544000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 11

Location

Chromosome 11:21854357..21857716

Sequence Coding Region

21854460..21854653,21854755..21854914,21855134..21855236,21855385..21855452,21855558..21855752

Expression

GEO Profiles:Os11g0544000

Genome Context

<gbrowseImage1> name=NC_008404:21854357..21857716 source=RiceChromosome11 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008404:21854357..21857716 source=RiceChromosome11 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcttctggcggcggcaactgccacagcagcgccggtgtcgtctagctctagcttcttcgccgcgacgacaagagccaccaccaccacccgcttcactgcccagctccagctctcgctgccacgccggtgccgatcctggtggggcaatgggaaagcgcgccggagcagccgccgccgcagccaccattgctgggccggtggcggcgccgcgacgccggaggaccacatggacgagctgccgccggggagaggccgctaccacccgttcgaggagatcgccgagaagctccaggtcgacgacggcgagcccgcccacctcaccgacgccgagtccgcacgaaccatcgtcgaggtgaacagcaaggcgacggtgatgatctcgacgctgatcgacgagggcgtgcacgagaggatcatcctgccggagttcccctacctcaccgatgagaacggagatatttacttcgaggtcgacaacgacgacgccctcctggagagcatcatgggagacgacaagactgcgcatgttatcatagggcttgacaacactcaggtctttgctgacttggatctggcagcggcatctgcgactgagtttgctcaagaagacgatgacgacgacgatgatgatgacgactcggatgatgaggagagtgactttgacgatgactttgatggggtgatgaaaaatccttctcaggaaattcagggttcttga</cdnaseq>

Protein Sequence

<aaseq>MLLAAATATAAPVSSSSSFFAATTRATTTTRFTAQLQLSLPRRC RSWWGNGKARRSSRRRSHHCWAGGGAATPEDHMDELPPGRGRYHPFEEIAEKLQVDDG EPAHLTDAESARTIVEVNSKATVMISTLIDEGVHERIILPEFPYLTDENGDIYFEVDN DDALLESIMGDDKTAHVIIGLDNTQVFADLDLAAASATEFAQEDDDDDDDDDDSDDEE SDFDDDFDGVMKNPSQEIQGS</aaseq>

Gene Sequence

<dnaseqindica>104..297#399..558#778..880#1029..1096#1202..1396#gggaaactatcttctccacaaataactatctcctcctcctcctcctctccccatcagctccgccgctcgccgccggccaccctccccccttccatggtacaccatgcttctggcggcggcaactgccacagcagcgccggtgtcgtctagctctagcttcttcgccgcgacgacaagagccaccaccaccacccgcttcactgcccagctccagctctcgctgccacgccggtgccgatcctggtggggcaatgggaaagcgcgccggagcagccgccgccgcagccaccattgctggtacgcgtcgacgatgctgccattgccggcgtttattgtagagttgagcttgagcatgagctagcagagagttagtttcatggcggcgagtaataatgcagggccggtggcggcgccgcgacgccggaggaccacatggacgagctgccgccggggagaggccgctaccacccgttcgaggagatcgccgagaagctccaggtcgacgacggcgagcccgcccacctcaccgacgccgagtccgcacgaaccatcgtcgaggtctacacataacacaaaattatctgaaaattttttcataaaattcttccatcactctcttcattttcgtgaacgcgcaaaaagattgcgcgtcaatgtattagaagaaagcagagtttttgttacacaacgcaaccggccggacggccattgcctggtgacaaccaaccatcactcttcttcaagctttcaccaagaaatcagtggaacaaaatgcaggtgaacagcaaggcgacggtgatgatctcgacgctgatcgacgagggcgtgcacgagaggatcatcctgccggagttcccctacctcaccgatgagaacggaggtatgcgagaaaaccggatgcttgagctgatgctttgatgcagctagctagcttagcttagctccttctctgtgacttttgctggagacactgttaattttgttcttgaagctgcatgctgtgatgtgtggcaatctgctctcatcagatatttacttcgaggtcgacaacgacgacgccctcctggagagcatcatgggagacgacaagactgcggtgacgattacgcccttttttttccccggttttcgttcttgtttctgaatttttatcttcgttgtatactgaattcttgttttggatgatggttcatggttgtagcatgttatcatagggcttgacaacactcaggtctttgctgacttggatctggcagcggcatctgcgactgagtttgctcaagaagacgatgacgacgacgatgatgatgacgactcggatgatgaggagagtgactttgacgatgactttgatggggtgatgaaaaatccttctcaggaaattcagggttcttgattactttgccaattgcaattggtgattggattttccttgacactgctgcatctctgaaaacattgcaggagggtgtgtttgcagtcgatgacgacgatggcgatgaggatggagaagacgaagatctgcctagatggacagatctagaaaccatgaattcctgccatccattgtactttgcaaggatgattgcagaggtatctgactcagaattttagcatctgtcattttagttgccatgatttgttcaagcatcatgttcttcacttgtacgtgcagacctcaaccaagtctagtatagactggttggacagaccacctgcaagccttgttgttgagggtcaactgagaccagcctttgctgaagagagcaccatggtttcaaggcatttatcaagtagcaattgctatgaactcagaaatgtatcttatattcataggatttctggaacataggattttgacaggtttctgtaatttgtacagatgatgaaccacggaaagataacaaggagagtggtgctacatttttcaaggttgaggttctgagcattgagctgatcactgcatatggaactgaggtatagttctttcattttgatatggtatttctatttatcctcagtctatgaataatgaacaatgtactgtgaatttctatttagtaaaattgttttcatgcttgaattccttgtagccaaaggtaaagataggggaataccggaaagctaggccagatatcattgcgcattctgcaccgaacataatatcgcgcttgagagctggtggagacaagataagccaggctctgaaatcactctgctggaggtgcaaggccatccaaatagaggtacaaatttcttcagattgctgaacattatggaggaagtacaatgcctgctaatgttgggtcatcactgtaaatgtaatatttccacaggaggcagctgtcattggagtggactgccttgggtttgacttgagagtgtgctcaggaacacaagtgcagacactgagatttgcgttccctgcaaaggtcagtatcagctttcagtatgaacaaaattgcaggaaaccagtacccttttctacaaggaggaaaccagcatctatgcgttgacgaataaaactgcttacattctcagctgaaccactccaacagattttatctgaattttcatcctcatgtgcttccgaatgttctgcactgcaggccacttcagagtttggtgcagagaagcaaatacacgaacttctgtttcctaggatacagcaagagggacagtcaccacaaactagacagaaagagtcttgatgtaattcggaggagataatttattcatttggtaggaattactagctaaaataaaatatatgccacatgtcctttttcttccatttatccatggggtagaatttttagattccagttttgtgtcattgtagattgattttatgtatcaatctaccaaagtatttcaaaattctttagacctgttgaggaaagcacagataagagaagcactgtaggagcctctgaatatttggatggcaatcgatacaaataagacgtgccagcaagttcagtagtcaatttataatccagagaacagcaaagcaatgtaacattagatggtttgtgtgaaccaaattgtacacaaattcttcttgagcgagtcagtctcaagttacactagtcaagtagtcagcatcacctgaaaaaccgaaggctctacgggttcatttgttcagcaattcctgaaggagtggtacatgaagtggggaaacgaaaaggatgtaaccacagataggtacatatttccttctaacagcaggatctatgaaggttaggaaaacatatgcccacaggcatttccaaacacacaaccttaatgctgaaccatggggatgaatcttgtacaacttgattactcttgagctgttgcttgttcagaagattggtc</dnaseqindica>

External Link(s)

NCBI Gene:Os11g0544000, RefSeq:Os11g0544000