BGIOSGA005118

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Revision as of 11:16, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA005118| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA005118, complete gene.| tag = P0492G0...")
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Gene Name

BGIOSGA005118

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA005118, complete gene.

LocusTag

P0492G09.2

Ensembl Transcript ID

BGIOSGA005118-TA

Ensembl Protein ID

BGIOSGA005118-PA

Length

4575

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:44927541..44932115

Sequence Coding Region

44927541..44927666,44928537..44928653,44929330..44929441,44929624..44929751,44930259..44930411
,44930793..44930942,44931453..44931649,44932088..44932115

Genome Context

<gbrowseImage1> name=IndicaChromosome01:44927541..44932115 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:44927541..44932115 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGGCTCCGAGGAGGAGCCGTCGCAGATGCGGAGGGCGCTGGTGGACGCGCTCGCGGGGGCCATCTCCGGCGGCATCTCCCGCACCGTCACCTCCCCCCTCGACGTCATCAAAATCCGCTTCCAGGTTCAATTGGAGCCCACAACCTCGTGGGGTGTACTTCGAAGGGATGTCTATGGACCTTCCAAGTACACTGGGCTTTTGCAAGCAAGTAAAGATATTCTCCGAGAGGAAGGTTTGCCGGGATTTTGGAGAGGAAATGTTCCAGCCCTATTAATGTATATGCCATATACAGCTATACAATTCACTGTTCTACACAAGCTGAAAACATTTGCTTCTGGTTCATCCAAAACAGAGGATCATTTGCACTTGAGTCCTTACCTATCGTATGTAAGTGGGGCTATAGCAGGATGTGCAGCAACAGTAGGATCATATCCATTTGACCTTCTCAGAACAATTCTTGCATCACAGGGTGAACCGAAGGTTTACCCTGACATGAGGTCTGCATTTCTTGATATAATGAAAACCCGCGGTTTCCGAGGACTTTACGCCGGTCTAACTCCAACTCTTGTTGAAATCATACCATATGCTGGCTTACAGTTTGGTTCATATGATACTTTCAAACGGTCGATGATGACATGGAATAGGTACCGATATTCACATCTTAACTCAGGAAGTGAGGATGATTCAGTATCAAGCTTCCAGTTATTTCTTTGTGGATTTGCAGCCGGAACATTTTCAAAAGCTGCTTGTCACCCACTTGATGTTGTAAAGAAAAGATTTCAGATTGAAGGATTAAAACGACATCCAAGATATGGCGCCCGAATTGAGAGCAGCACATACAAGGGCATGTACCATGCCCTAAAAGAGATTGTTGCGAAGGAGGGGTTTGGAGGCCTTTATAAAGGACTTTTCCCATCTTTGGTGAAATCGGCTCCTGCTGGTGCCGTGACATTTGTGGCATATGAATACATCTCAGACTGGATAGGGAGCAAAGCTGGAGTCGAGTGA</cdnaseq>

Protein Sequence

<aaseq>MGSEEEPSQMRRALVDALAGAISGGISRTVTSPLDVIKIRFQVQLEPTTSWGVLRRDVYGPSKYTGLLQASKDILREEGLPGFWRGNVPALLMYMPYTAIQFTVLHKLKTFASGSSKTEDHLHLSPYLSYVSGAIAGCAATVGSYPFDLLRTILASQGEPKVYPDMRSAFLDIMKTRGFRGLYAGLTPTLVEIIPYAGLQFGSYDTFKRSMMTWNRYRYSHLNSGSEDDSVSSFQLFLCGFAAGTFSKAACHPLDVVKKRFQIEGLKRHPRYGARIESSTYKGMYHALKEIVAKEGFGGLYKGLFPSLVKSAPAGAVTFVAYEYISDWIGSKAGVE</aaseq>

Gene Sequence

<dnaseqindica>1..126#997..1113#1790..1901#2084..2211#2719..2871#3253..3402#3913..4109#4548..4575#ATGGGCTCCGAGGAGGAGCCGTCGCAGATGCGGAGGGCGCTGGTGGACGCGCTCGCGGGGGCCATCTCCGGCGGCATCTCCCGCACCGTCACCTCCCCCCTCGACGTCATCAAAATCCGCTTCCAGGTCCTCCCCCCCTCAAAATTCCGCCGCTCGCGGTTGCATTTCCCTACCCGGCTAGCTCCCGCGGGGAGCGCTCGCGCTGTTCTATGGTGTTTTGTAGCTAGAATTGGTAAGATCGGTTGATTGGGGTTGTCTGGGAGAAGTTTTTGAGGCTGGTGCTTTGTTTTGTGGGGGGACCTGTATGCTGTGTGTACTAGACGTCGGCTGCATCCGTCGATTTGCCCCTGCATTGCATATGTCCATGAAATTGAGGTTGAGGAGTACCCGCGGTCGCCTTTATCTGTGTGAATTTGTGGCTTCAACGCCGGGGAGCTATTTGGTCAATGAATTTGGGGATGAGCTCCACATGTCTTAATCCCAATGGTTTGGTCTCGGAAATGTACTTAAATTTTCGTTACGATGTGGATGTATTATAGCCGTTTTTATTGGTCAACTAAGCAGTGTGTTCGGAGTTATTTATGTCCAGTAACACAGAATATTTGTTCTTCTGAAGTTATTTTTGTTATGTTAGCTCCAGCTACATTGTTGGAAGCTTGGCCATGTATTCAGTTTGATGATAACAAGGAATACCACTTCTAATGACTTGTTGACAATTGGATGGCTGTATACACCTTTTAAGCCAGTAGATATGGTAGCTTTAGCTTTGCTGTCATGAAGGGACCTTAAGGATTGCACTGGCTATGTGTCAAGGGAGTTTGTACCACATGCGCTTTCCAACAGGATTGATGGCCTTTGCACTTAAAGCTATACAGTAGAGTTAACTGCATTGGTTGCAACCTTACTGTATCAACCCGTGACATTTTTTTACAGATTGCATTGGCTTGAAATATGCATATTTTGGATATTCAGATGATTTCTTGTGATTTTCCACAGGTTCAATTGGAGCCCACAACCTCGTGGGGTGTACTTCGAAGGGATGTCTATGGACCTTCCAAGTACACTGGGCTTTTGCAAGCAAGTAAAGATATTCTCCGAGAGGAAGGTTTGCCGGTATCTCCTTTTCTTTGAACATTTCTCTGTTCATGTGCTGTTTACTAGTGACATATGCATGTGCTGCTGCTTATTAACTTGCATGCCTGAGTGGGATCACTCATCTAAATATCAGTTTTAATATCATTTTATTATGCTGAACATGGACCAAATGCAAAAGCAGGGCTGGCTTATGGATTTCACTTCTGCTGCTAATTCTGCTAACTTTATTGAGTAACATTGATTTGGTGACATCTAGCATGTATCAAAGGCTACTCAGCCACACGTTGCTCTGTCTCTTCCTGTCATATAACTTATGGTGATGCATTAAAACAAAACCCATTAATTTGATCTACTCCTGGTTCAGTTCAAATGAAAATGGAAGGCACCAAGCTGCAAGATATACTACTCTGACACTATTCTCCAAAAAAGTACCACATGTGTTTTTATGGCTGAAATAGAGGCTTGAAGTTTACTTGTTAGGTGATATTGGCTGCTGGTTTTGAAATACATTTTTTCCTGCAATGTATTGGGAATCACAGTGTGTGTTGCCTTTATTTTTTGCCCTAGATCTGTATACTTTGTTAATCTATGTGTGATTTGTTCTTATTTTCTGTTTGTTTTAAATGTCATATCTTAAACAAAAAGAATTATTCATTAAGAAAAGTCGTCACCATGCAAAATTCTGATCTTTCAGGGATTTTGGAGAGGAAATGTTCCAGCCCTATTAATGTATATGCCATATACAGCTATACAATTCACTGTTCTACACAAGCTGAAAACATTTGCTTCTGGTTCATCCAAAACAGGTACATTTTCTCTTTATGGTATCTGTTCCAACTTGGTCCATTGTTCTAGACTGAAGTATGAATTACAGTGGTCACTCCTCAAACCTTAATTTTTAGTGTGTACAAAAGTTATGAGGTTTGCCCAGAACTTTGAGCTTTGTATTGTCTCTATAGTCCTTACCTGATCTGTGTTATTTGCCCAGAGGATCATTTGCACTTGAGTCCTTACCTATCGTATGTAAGTGGGGCTATAGCAGGATGTGCAGCAACAGTAGGATCATATCCATTTGACCTTCTCAGAACAATTCTTGCATCACAGGGTGAACCGAAGGTAAATATGTACTCTGCGGTTGTAGACACCTTCTTTTTTTGTTTCATTGAGGTATTAACATGATCTCTGGCCATATACTCTCACTTTATTAGCTCCTAATAGCATGGATGTGATACTTGTTCATAATGACTGAATCGTCATCTTCAGTATACATACATAACATAGTATGCAAAGGACTTCCTGGCACCTTTTTTGTTTTCTCAATCGTTTCTCTTCATTCCCTGATTCGTGTAGTTTTGTCAACATTGCACACCACGCTACATAGGAGCAGTTTAAGGTTGAGGTCTTTTTGGCTGGAAATCTAGTTTTCTTTGCAGAACTTAAAACAACACTGATTCATATTGTTGTTTGAAAAACATGAATTTTTCCTTTTTTATTATTGGATTTTATTATGCAAATGATTATTTTGTGCTGAACTTTTCCACTATCATGTATTTATTCAGCATATAGAGTACTGGAATATCATGGCACAAAATTGTATTCACATGCAGTTATGTTTATCTGTAGGTTTACCCTGACATGAGGTCTGCATTTCTTGATATAATGAAAACCCGCGGTTTCCGAGGACTTTACGCCGGTCTAACTCCAACTCTTGTTGAAATCATACCATATGCTGGCTTACAGTTTGGTTCATATGATACTTTCAAACGGTCGATGATGGTAACAATACTAATATCTCTTTTTTGGCATGTGCTTAATTAGACTATTTTGAGGTGATTTATGCCATTTTAGATATTGTAGCTTAGCCTCAACTTTATTTGTCTCCAAGTCTGATCATATTTACACTTTTCTTGAGAATGATGACACTGAAGTATTGAGATTAAGGAAAGGTAGTGAATCTATATATCTTTCAAACAAGTGAGGACCTAAAAATCTAACGACGCTTAAATAAGCAATCTGTAATTACTAGTTATGTGGAACAATCTTAATGCTTGATAAGAAAAAAATTATCTTTGACACTTAGAAACTTTTTATTGCTGTGGGATTCCGTGAATGCTGTTAATGCTTGAACCATCTGACTTTATTTTTTTTTCAATGTAGACATGGAATAGGTACCGATATTCACATCTTAACTCAGGAAGTGAGGATGATTCAGTATCAAGCTTCCAGTTATTTCTTTGTGGATTTGCAGCCGGAACATTTTCAAAAGCTGCTTGTCACCCACTTGATGTTGTAAAGAAAAGATTTCAGGTAAATGCCATTTGTTTTGTCTTGAAAAAGGCTTATTTTGACAGTTCTCAGACATGAATCATGTTAAATTTTTGTGAAGAATACTCTTGATTGAGTTGCATTATGATAATGAAGTATTCATTACATTTACAATTTACAAGTTTGTAAAATCACATCCAACAGGAAATCTGATACTGGGTTGCAATGAGATATAGTTAGTGTGGTGTAGTAGGTTGTCAGCAGCTGCAGTGTATGATCTCCACAGGTCTGGAGTATCATACATCATGCTTGACCAGGTCAACTAAGAGTACCATTCTGGTAACTATGCACCAGAATAGGTCATTGGTCTGGTAGCTATGAATCACCTCCTTTCCATTGTCCTGAAGCTTCATACATTTGGGCTGCTTCACCTACTTCATGCTTCGTGTTGCAGACTTCGCTTCCTACATTTTCTTATTATATCTAGCTGTATTTATCTCAAGAAATAATTTGAAGTTATGGAGCACTGATATTTGTTCCATCATACTGCAGATTGAAGGATTAAAACGACATCCAAGATATGGCGCCCGAATTGAGAGCAGCACATACAAGGGCATGTACCATGCCCTAAAAGAGATTGTTGCGAAGGAGGGGTTTGGAGGCCTTTATAAAGGACTTTTCCCATCTTTGGTGAAATCGGCTCCTGCTGGTGCCGTGACATTTGTGGCATATGAATACATCTCAGACTGGTTAGAGTCAATACTGATGTGACAAATCGCCATGCAGTGTTATTCATTTTCCTCCCCGTTTTGTGTTGTATTGTTCTTATTATTTCGCCCTGCTGTTGCACACTTGAATTAGTTTAATTGATCCATTTCTGGAAGAGGCTGCAGTTCCTTTAGATCTTGCAGTCTATACAAGATTTGAGGAGCCTACAAAACCAGCTGGATGAGTAATGCTTGTAAGCTCCTCTCATGGGTTTTGGACATCACTTAACATTACCAGAACTAAGCAGTCAGATTGGTGATTTAAGCATCTGGCTTGCTAGATATCTGCTTACGTGCTCAGCCAGACCTACCTGTTGCTTTTTTTTACTGAACATGCTACATAGTTCTCTTGCGTGTCAGTGTGTGCATAAGTGCATTATTGTATGACATCAAATCACTGAATCTGAAATTGTTTTGCAGGATAGGGAGCAAAGCTGGAGTCGAGTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA005118