BGIOSGA005133

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Revision as of 11:16, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA005133| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA005133, complete gene.| tag = P0504E0...")
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Gene Name

BGIOSGA005133

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA005133, complete gene.

LocusTag

P0504E02.25

Ensembl Transcript ID

BGIOSGA005133-TA

Ensembl Protein ID

BGIOSGA005133-PA

Length

5054

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:45162644..45167697

Sequence Coding Region

45162644..45162887,45163965..45164047,45165333..45165384,45165466..45165591,45165704..45165786
,45166045..45166227,45166638..45166974,45167344..45167487,45167567..45167697

Genome Context

<gbrowseImage1> name=IndicaChromosome01:45162644..45167697 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:45162644..45167697 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGGAGGAGGGCGACAAGGCCACGGCGGCGGCGGAGGCGGGGGGAGGAGCCGCCGCTACCGCCGCCGCTGGTGGTGGTGGTGGGGGTGGGGGTGGTGGAGCGGAGGAGGAGAGCGTGAAGCTGTTCGTGGGGCAGGTGCCGAAGCACATGACGGAGGCGGAGCTGCTCGCCATGTTCCAGGAGGTGGCCATCGTCGACGAGGTCACCGTCATCAAGGACAAGGCCACCAAGGCCTCGCGAGGGTGCTGCTTCCTCATATGCCCCTCGAGGGAAGAGGCTGACAAGGCAGTGAACGCTTACCACAATAAGCACACACTTCCTGGGGCATCAAGTCCTTTACAAGTAAAATATGCTGATGGAGAGTTGGAGAGACTAGAACACAAGCTTTTTATTGGAATGCTTCCAAAAAATGTAACGGACACCGAATTGACTGATTTATTTTCCAAATATGGAAATATCAAGGATTTACAGATTTTAAGGGGTTCACAACAAACAAGTAAAGCTGGCTGTGCATTCCTTAAATATGAAACAAAGGAGCAAGCAGTGGCAGCTATTGAGGCTCTAAATGGGAAGCACAAAATAGAGGGCTCTAGTGTGCCGTTGGTTGTCAAATGGGCCGATACAGAAAAGGAAAGGCAGGCCCGAAAAGCACAAAAGGCTCAATTGCAATCATCTAATATGCCTAGCGCGAGTCCTATGCAACAATCTTCATTATTTGGGGCTTTACAGATGGGATATATGCCTCAATATAATGGATTTGGCTATCAGCCACCAGGGACATACGGACTTATGCAGTACCCCTTATCTCCTATGCAGAATCAAGCCACATTCCCAAACATGGTTCAACCTGTTAATCAAGGAAACTCTATACGAGGAGTCAACCCTGAACTGTCCCCTAATTCAGTTCCTAGATCATTCAACGCAATGCAGTTAAGCAGCCCTTATCCACCTGTACCTGGTGTGCAGTATGCTGGATCCTACCCTGGTGGTCTCATGAATAATCGTCCTTTCGGGAATTCGTTCAGTTCGATTAAAGTTCCAATTGTAAATGCAAATTCTCCTGCATCTTCTAGTCCCAGTAGCAATCCTGGTGGCCAAATAGAAGGTCCTCCAGGAGCTAATCTATTTATCTATCATATCCCACAAGATTATGGGGACCAAGACCTTTCCAATGCATTCCAGAGGTTCGGTAGAGTACTAAGTGCTAAGGTTTTTGTAGACAAAGCAACGGGTTCCAGCAAATGCTTTGGTTTTGTAAGCTACGATTCTCCTGCTTCCGCACAGGCAGCCATTGGTGTGATGAACGGTTTCCAATTAGGCAGTAAAAAACTCAAAGTACAACTCAAGAGAGACAACTCCAAGCACAGTAAACCCTTTTGA</cdnaseq>

Protein Sequence

<aaseq>MAEEGDKATAAAEAGGGAAATAAAGGGGGGGGGGAEEESVKLFVGQVPKHMTEAELLAMFQEVAIVDEVTVIKDKATKASRGCCFLICPSREEADKAVNAYHNKHTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVTDTELTDLFSKYGNIKDLQILRGSQQTSKAGCAFLKYETKEQAVAAIEALNGKHKIEGSSVPLVVKWADTEKERQARKAQKAQLQSSNMPSASPMQQSSLFGALQMGYMPQYNGFGYQPPGTYGLMQYPLSPMQNQATFPNMVQPVNQGNSIRGVNPELSPNSVPRSFNAMQLSSPYPPVPGVQYAGSYPGGLMNNRPFGNSFSSIKVPIVNANSPASSSPSSNPGGQIEGPPGANLFIYHIPQDYGDQDLSNAFQRFGRVLSAKVFVDKATGSSKCFGFVSYDSPASAQAAIGVMNGFQLGSKKLKVQLKRDNSKHSKPF</aaseq>

Gene Sequence

<dnaseqindica>1..244#1322..1404#2690..2741#2823..2948#3061..3143#3402..3584#3995..4331#4701..4844#4924..5054#ATGGCGGAGGAGGGCGACAAGGCCACGGCGGCGGCGGAGGCGGGGGGAGGAGCCGCCGCTACCGCCGCCGCTGGTGGTGGTGGTGGGGGTGGGGGTGGTGGAGCGGAGGAGGAGAGCGTGAAGCTGTTCGTGGGGCAGGTGCCGAAGCACATGACGGAGGCGGAGCTGCTCGCCATGTTCCAGGAGGTGGCCATCGTCGACGAGGTCACCGTCATCAAGGACAAGGCCACCAAGGCCTCGCGAGGTGCGGATCCGTACGCCCCGGATCTGGGCTCGCGGGCGCTTGCTCGTGCCCCGGGGCTCGATTTGGGGGGCAATGCCTGCGGGGAATTCGAGCTCCGCGGCTGTTTGTTCCCCCCCTTTGCTTTGCTTCTTCCGCGCGTGCTTCTGTGGCGATTGTTCCGCGCAATGTCGTCGGAGGAATGAATTCGAGCGTTTTTGGCTGGATTTTCGTGTGCTTCTTGATTTTAGCCTTGATATGCTCCATTGCTGGAGCGAGATCTCGCGCCGAATTAATCTGGTTGGTGGGGGGCGTTGGTGGGGCTCTTAGCTTGAATTTTGAGTGGTATTGGTCTGAATTGCGTTTCATCAGTCGAATTTGTCCAACGCCGTTTCGAATTTCACCTTTCTGCTTTGTTTTTCAAAATGCGGTTTTATCGGAACGTTTATCGGCGTTTTTTTTCTTAGGGAGCAATGCTGTGCCGTAAATGTGCTTTCTACGAGTACAAATCAGGCCACTTATTTTCTCTTACCACCAGTAATTTTGGCACTTCTTACTCGAGCTTTGGAGCATGGAACTTAGTTTGGATCGGGCTTCAGAATATCATAAGACGAGCTTTGTTCGGACTTCTGTTTGGCTATTTTGAGCTTTGCTCGGACTTCAGAAATGCAAGATGGTCATGCATTTTTTTATATTATGCGAGATAACTAAGTTATTACGTTGTTCAATGATTTATTCTAATTTGAGCGAACTAGAAATGTGATGATAGTTTGGGTTTTTACCCGATTCGGTGAATTTTCACTTCTTTATGTTAGCATTGTGTAGAGTAGTCACTTTTCAATGCTTCATAGACCCTAGAGATCGTGCTACAAATGGAAACTTGGGTGGAGCAGACATCGCTGCAAAATTAGAAGGCATATGCTGCATCCTTCTTATTTGGGACATTGACAAGCCAGATTTGCTCCGCTTGTGCTTTTCTCTTTGTCTCTGTAGCCCCATGCCACCTGATAGCCTTTCTTCTTCTTTTTTTTTCTATTTCTTCGCTATATCTGTCTGCCTCTCAGGTTGATGCTAATTTTGGATGTCATGAACTTAATGCAGGGTGCTGCTTCCTCATATGCCCCTCGAGGGAAGAGGCTGACAAGGCAGTGAACGCTTACCACAATAAGCACACACTTCCTGGGGTACGTGATCGTTGGAATATATTACAATGCTAAAGTTGAATTCATGCTGTTTTCCTTAGTTGAATTGTTGCAAGCTGATCCCGTGTTTATGGGGTGAAAATTACATGTGATTTTGAAATTCCATAATCTGGTTGCCAAGGAACAGCATTGGAAGCTTGTGCATGTATTTGGCTGTTTGGTGGGACCAAAATGAAATCTGTAGTGGTAGTGCGGGGCACTGGTGAAATTTGACTTGGGTAGGGGGTCTAGAATTTGGAATGGTCATGCTAAATATCTATGGTGGGTGGTCTAAAAATCACTGGACATGGATTATCCTTATTTTTCAGTCAATAAGTAACATCATTATTCTCCACAGTTCTGCTGCAAGGCTGCTGATATGCATGTATTAGTTTCAGTACGTTTTGTTTCATGGCTAGCATAGTTAACGAGTAATCTGATTCAAGGATGTATATTCGGTTGGAAAACAAAAACATTACACTTACCCTCAGGCAGGGCTAAACTTTGAGCCACACCACTATGAACAAGTAGTGGGTGTGCTTGGTCTTTGACAGCAATAAAGTTGGATCTATAGGAAATTTAACCTGTCAACAGCTGCATGATGGTCTATCTTACTCTCATAGCGGCACACCTAACAAAAGTTAGATCACCAATCTGGCCATCACACTTTTGTACCCATCCTGTATGGAAATGAACTGATTGTAGCTTCAGTTTTGTAGCATACCTAACTGAGGTCCCAACTCCCAACTGACCAAACAATATGGACTGAGTGTTATGATTAGGATTTGAATAGAACTTTTGAGATAGGGACAAAATCTCAAACTAATTCTGGTGCATACTCTGGTGGACCAAATTCTTTCTTCGGAATGAAAAAGCTTCATGATTTCACTAGTTTTGGAAACTTTTAAAAAATTATGTAGGTTGATGTTACTTTCACAGTTCAGGTGTCTTCACCCAGTTAATCACAGAATAAGACTGGACATCTAATCCCACTCCCAATCAGATGAGTAATGTTGAGACATGAAACATGGATGATGATAGAAACAAACTATAAAGTCTTGGAAGTTAGGACTTTGTCCTAATGTTGGACAAAAGTTGGAGTGCATATGAGTGTGGTAGTTGGTAATCACTGACTTTGGGAGCCAGCAAGGCACATTTACGTGACATTTTTTTTCTATAGTGTTAATAGCTACTGTTGTGACACCTTGTTCATGAATAGCTGCCAAACATTCCCAGTTGCTTCTTTCTTTTATCTGATGACAATCTTCGTTTTCTTTCATCAATTCAGGCATCAAGTCCTTTACAAGTAAAATATGCTGATGGAGAGTTGGAGAGACTAGGTATGATTGCCCTTTACATAGAACTGTTCTTTTTGCCATTGATTTTATTGCACTCATGCTTGTACTTGCTATGATCTCCAGAACACAAGCTTTTTATTGGAATGCTTCCAAAAAATGTAACGGACACCGAATTGACTGATTTATTTTCCAAATATGGAAATATCAAGGATTTACAGATTTTAAGGGGTTCACAACAAACAAGTAAAGGTGAGATCTGGTGAATAACCTATTTTCCTAACCATTTAGAGCTAGAAGCACTGGTTGACTCTGGAACTTTACAATACCTAATGTTTTTGTTAAATTAACTGTGTTATTGCAGCTGGCTGTGCATTCCTTAAATATGAAACAAAGGAGCAAGCAGTGGCAGCTATTGAGGCTCTAAATGGGAAGCACAAAATAGAGGTTTGCCAGAAATTAGTTAGAATAGCAGAAAAATTCTTAGTGGTTATTGAAATGTACTGCAATTCACACATGAACATGATCCATAGCTCTACTTAGTCATGAGTCTGATACACATAAACAGTCAAAGCTAAAGACACTCTCTGCTATTGCATTTATTTGATACCTTGTGTCTGCATTATATTATCCAGTTACATCCCTTCTCAAACCCCACGTTATTTTTCATGAATATATTATAATCTTTTCTGATTTATTTGTTAGGGCTCTAGTGTGCCGTTGGTTGTCAAATGGGCCGATACAGAAAAGGAAAGGCAGGCCCGAAAAGCACAAAAGGCTCAATTGCAATCATCTAATATGCCTAGCGCGAGTCCTATGCAACAATCTTCATTATTTGGGGCTTTACAGATGGGATATATGCCTCAATATAATGGATTTGGCTATCAGGTGACTTGTGCTTTTCTCTTAATATTTTTTTTTACATCATACATTGACGTATACTTAGCACAAGAACTATATTAGTCATATTCTTCTTTAAAAATATTATTTGTCACCTGAAAACATTATCAGGATATGCCCCAATAATAATTTGGTTCACGTTGTTTCATGGCCACTATTTGGTACTGCTACACACATAAATGGTGGCTCTTGCCATATTCAGTGTAAAAGGGGCATTTGTCCAAACTGCTAAAATTCTTCATCTTCGTTCTTCATTATATTGTTGGTACTTTCTCACAGAAGAAAAATTTTGTCGGTACTTCAAACCCTAGCATTGAGCTTCAAGAGAGTGCTTAAGATTTTTTTTTAATGCACACATATTTTGCTTGGAATAAGTCTGATTTTGTTTTCTTTTGCAGCCACCAGGGACATACGGACTTATGCAGTACCCCTTATCTCCTATGCAGAATCAAGCCACATTCCCAAACATGGTTCAACCTGTTAATCAAGGAAACTCTATACGAGGAGTCAACCCTGAACTGTCCCCTAATTCAGTTCCTAGATCATTCAACGCAATGCAGTTAAGCAGCCCTTATCCACCTGTACCTGGTGTGCAGTATGCTGGATCCTACCCTGGTGGTCTCATGAATAATCGTCCTTTCGGGAATTCGTTCAGTTCGATTAAAGTTCCAATTGTAAATGCAAATTCTCCTGCATCTTCTAGTCCCAGTAGCAATCCTGGTGGCCAAATAGAAGGTTAGACACATTCTACTTACACCTTTAGCCTTTGTGCTGGAGAAAACACCGTTTTCTTCCAAGATGTTATCTGGAAAAAGCTGCAACCTTAGCAATACATTTTCCGAGAAAAATCATGTGGCTTTTGATTCTATACCATGTACGTTATCCTGAAATGTTTATAATGTGCTTCTGTACATGAGGAATCCAAATGCATATAAGGACATCAGAGTTCAGGAGATGAACAAAAATCTAACAAAGATATTGAAGAATGGTTAGCTACCTGATTGTGCTAACTAATACTCTCTCTTTCTGAATATATGTTTACTATCAGTGTAGCTGTCATTTTGAAGTCCATCATGTTTTAAAGACTAGTCTTCATGCTTACAGGTCCTCCAGGAGCTAATCTATTTATCTATCATATCCCACAAGATTATGGGGACCAAGACCTTTCCAATGCATTCCAGAGGTTCGGTAGAGTACTAAGTGCTAAGGTTTTTGTAGACAAAGCAACGGGTTCCAGCAAATGCTTTGGTAATCTCTCTCTCTCTCTCTCTCACACACACACACACAGTTTGCTTATAGTCTGCTAATTGTTTTCTAACGGGTGCAGGTTTTGTAAGCTACGATTCTCCTGCTTCCGCACAGGCAGCCATTGGTGTGATGAACGGTTTCCAATTAGGCAGTAAAAAACTCAAAGTACAACTCAAGAGAGACAACTCCAAGCACAGTAAACCCTTTTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA005133