BGIOSGA005150

From RiceWiki
Revision as of 11:16, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA005150| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA005150, complete gene.| tag = OSJNBA0...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA005150

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA005150, complete gene.

LocusTag

OSJNBA0082E08.10

Ensembl Transcript ID

BGIOSGA005150-TA

Ensembl Protein ID

BGIOSGA005150-PA

Length

1577

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:45565656..45567232

Sequence Coding Region

45565656..45565680,45565772..45565867,45565968..45567232

Genome Context

<gbrowseImage1> name=IndicaChromosome01:45565656..45567232 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:45565656..45567232 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGATTCTGCCGGAGGAAACTCAGGCAAGCTGTTCGACGAAATGCCTCCCCGTTCGTTGGATCGAGGATGCCCCCGGAGCCCGTCACCGGCGGCGATGGAACACGGCTTCGACAGACACTGTGTGGTGCTCGGCGGAATGCCCAAGGAGAGATCAAGGTTGGAGTTGGACGCGGGGGTGTCACTGTGGGCAGGCCTTCAACCGGACATTCTGGGAATCGTGCTCCACTTCCTTCCATGCCTTGCCGACCGTGCGAGGATGCGGTCCGTGTGCCGTCACTGGCGAGCCAGCGCGAACGGCCACGTCCTGCCACCGCCGCTGCCCCTGCTGATGCTTCCTGGTTTCAAGTTCTCGAGCCTATCAGATAAGGGGGATTTGATGCCTGTGCGGTGCGTGCCGGTGCCTAAGGAGGTTGCAGCTGATGATCTCCGATGTGTGGGTTCTTTTCATGGATGGCTTGTAGGTGTGACTCCTAACAAGGATCGCAGCGACGAGTACAACAGAGATGCCGATGGTGACTGCTTCCTGGTGAATGTTTTCTCTCGCAAGGTCATTCGCCTACCGCAGCTGTGCCATATGCGTTACAATTTTCCTGCTTACTCCAGTAAGACCCTCCGCATCATCAATGGTTCTGGTGAGGTCTATTTTCGTGTCAATGATATATACACAATGTCACTATGCAATGTGGCACTATCTGCTTCACCTGACTCAAGAGGCAAGTACATTGTAGCTGCTTCCTCTGACCACAAGTGTGCATCAAAACTTGCTCTCTGGCAGCCTGGGATGATTTCATGGCATATTTGCGCTGGCGTTGACATTGATGGCCCAAGAGATCTCACTTTTTACCTTGGGAAGCTGTATGTGCTCCAAAGATATAAGATACGCCTCTTTGCTTTTGAAGTTGGGGAGGACAATGGTGGGCTCATGGTCTCTCGCGTTAAGCGTTGTCTGAGTGCGCTGCCTCTCCATCATCCCTACCAGGAAGGTGGTGCAATAAGTTGTAATATGGTTGTGTGGCGTGGAGAGCTATTATTAATCATCAGACACTACAGCGACAATTACCGTGACCGAGAAGTTCTTAAAGTTGAAGTGTTTGCACTGGATGTTAACACAAACCCTTATGGACTAACTGAGATTCACAGCTTGAATGGTGACTGTATCTTTGTTGGCTTAGGTGGCTGCAAGTCCTTTCCTGCTGGTCTACATCATGGAGTTGAAGGTGACCATATCTACTTTGTCCCTGATGATTGGAAGCCTTATGATACATTTGTGTATAGCATGAGAGATGGTAAGATGAGGTCCTTTGCCGTCAAACTATTAGCTTCCGAATTTGATGTGGACCAGTTGAGTCGTGATTTCCCGGTGTGGTTACTTCCTACCGAATGA</cdnaseq>

Protein Sequence

<aaseq>MDSAGGNSGKLFDEMPPRSLDRGCPRSPSPAAMEHGFDRHCVVLGGMPKERSRLELDAGVSLWAGLQPDILGIVLHFLPCLADRARMRSVCRHWRASANGHVLPPPLPLLMLPGFKFSSLSDKGDLMPVRCVPVPKEVAADDLRCVGSFHGWLVGVTPNKDRSDEYNRDADGDCFLVNVFSRKVIRLPQLCHMRYNFPAYSSKTLRIINGSGEVYFRVNDIYTMSLCNVALSASPDSRGKYIVAASSDHKCASKLALWQPGMISWHICAGVDIDGPRDLTFYLGKLYVLQRYKIRLFAFEVGEDNGGLMVSRVKRCLSALPLHHPYQEGGAISCNMVVWRGELLLIIRHYSDNYRDREVLKVEVFALDVNTNPYGLTEIHSLNGDCIFVGLGGCKSFPAGLHHGVEGDHIYFVPDDWKPYDTFVYSMRDGKMRSFAVKLLASEFDVDQLSRDFPVWLLPTE</aaseq>

Gene Sequence

<dnaseqindica>1..25#117..212#313..1577#ATGGATTCTGCCGGAGGAAACTCAGGTGAGACCTACCCATCTCACCTCGGCCTGTTCGCGCATCTCACAGTGCGGAGGCTTGGATCTGATCTGATCCACCGGTGGCTGTTGTGCAGGCAAGCTGTTCGACGAAATGCCTCCCCGTTCGTTGGATCGAGGATGCCCCCGGAGCCCGTCACCGGCGGCGATGGAACACGGCTTCGACAGACACTGTGTGTTCGTTATCGTCTAGTATATGTTATTGCGTATTTTCCTGGCCGTGGGTGGGTGTTTGCTGTGGAGCGTGACAGTGACACCCGGTGGCTCGTGCAGGTGTGGTGCTCGGCGGAATGCCCAAGGAGAGATCAAGGTTGGAGTTGGACGCGGGGGTGTCACTGTGGGCAGGCCTTCAACCGGACATTCTGGGAATCGTGCTCCACTTCCTTCCATGCCTTGCCGACCGTGCGAGGATGCGGTCCGTGTGCCGTCACTGGCGAGCCAGCGCGAACGGCCACGTCCTGCCACCGCCGCTGCCCCTGCTGATGCTTCCTGGTTTCAAGTTCTCGAGCCTATCAGATAAGGGGGATTTGATGCCTGTGCGGTGCGTGCCGGTGCCTAAGGAGGTTGCAGCTGATGATCTCCGATGTGTGGGTTCTTTTCATGGATGGCTTGTAGGTGTGACTCCTAACAAGGATCGCAGCGACGAGTACAACAGAGATGCCGATGGTGACTGCTTCCTGGTGAATGTTTTCTCTCGCAAGGTCATTCGCCTACCGCAGCTGTGCCATATGCGTTACAATTTTCCTGCTTACTCCAGTAAGACCCTCCGCATCATCAATGGTTCTGGTGAGGTCTATTTTCGTGTCAATGATATATACACAATGTCACTATGCAATGTGGCACTATCTGCTTCACCTGACTCAAGAGGCAAGTACATTGTAGCTGCTTCCTCTGACCACAAGTGTGCATCAAAACTTGCTCTCTGGCAGCCTGGGATGATTTCATGGCATATTTGCGCTGGCGTTGACATTGATGGCCCAAGAGATCTCACTTTTTACCTTGGGAAGCTGTATGTGCTCCAAAGATATAAGATACGCCTCTTTGCTTTTGAAGTTGGGGAGGACAATGGTGGGCTCATGGTCTCTCGCGTTAAGCGTTGTCTGAGTGCGCTGCCTCTCCATCATCCCTACCAGGAAGGTGGTGCAATAAGTTGTAATATGGTTGTGTGGCGTGGAGAGCTATTATTAATCATCAGACACTACAGCGACAATTACCGTGACCGAGAAGTTCTTAAAGTTGAAGTGTTTGCACTGGATGTTAACACAAACCCTTATGGACTAACTGAGATTCACAGCTTGAATGGTGACTGTATCTTTGTTGGCTTAGGTGGCTGCAAGTCCTTTCCTGCTGGTCTACATCATGGAGTTGAAGGTGACCATATCTACTTTGTCCCTGATGATTGGAAGCCTTATGATACATTTGTGTATAGCATGAGAGATGGTAAGATGAGGTCCTTTGCCGTCAAACTATTAGCTTCCGAATTTGATGTGGACCAGTTGAGTCGTGATTTCCCGGTGTGGTTACTTCCTACCGAATGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA005150