Os11g0544600

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Revision as of 09:12, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os11g0544600| Description = Conserved hypothetical protein| Version = NM_001074586.1 GI:115485820 GeneID:4350684| Length = 6506 bp| Definition ...")
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Gene Name

Os11g0544600

Description

Conserved hypothetical protein

Version

NM_001074586.1 GI:115485820 GeneID:4350684

Length

6506 bp

Definition

Oryza sativa Japonica Group Os11g0544600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 11

Location

Chromosome 11:21886952..21893457

Sequence Coding Region

21887082..21887182,21888073..21888178,21890006..21890283,21891458..21891563,21891683..21892030
,21892108..21892184,21892263..21892387,21892755..21893006,21893185..21893207

Expression

GEO Profiles:Os11g0544600

Genome Context

<gbrowseImage1> name=NC_008404:21886952..21893457 source=RiceChromosome11 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008404:21886952..21893457 source=RiceChromosome11 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggagcccgacgccgcagcggccgcggccgccggcgagagggaggcggagatcgagaaggccttccgcgcccgcctccccgacttcaggaagcaggccgactccttaaccctcgaaggtgtaaggagagcactggagaaggacatgggcttggagaaacattcacttgacgcccataaaaagttcataaagcaatgtgtagacaaggttttttctggttctgatgatgacaatacgaataataatgcaccagagaaggatgaagctaaagatgaccgttcttctaaagaagaatcagaagatgcccaaccaacatctgactcgaacaaaatttcctccaatgctgatgagccggtggcaaaatccagtgagacagatagagatcaggagggagacaaagatcatagttctggcagtgacattagtgaagctacgataaaaaatgctattgtcaaaagggcctcatattttagagagaactcagaaactattactttacaaggagttcgccggactttagaagaagatctcaagcttcagaagaaagctttggatgcttacaagtcttttatttcgacggaattagacaatattcttcaagaacctgcaaatgggacaaagaaaactagtaaaactgaatctcataaggattctggccagaagacaagcaaaaactctaagagagctcgtcaagactctgatacttctgaaataaatgatagccattgtgagaggggagacagtgatgaggatgcaaggccaaaaaagaaaaaggctgaaaagggcaaagctgtaaaaaggcagaaaaaaactacagtggagaaacaactgtcaaattcaaaggctaaaaaggttgccaaaaaagatttagataaaagtaaagagcggagtggatcagaagaagataattcaaattcatcagctgaagaagataataagaaaaaacgacaagtagctccagcttacgggaaacgggtggaacggctgaagtcaataatcaaatcttgtggaatgagtatcgcacctactgtgtatcggaaggcaaagatggctcctgagagcaagcgtgaagcctgtttgataaaggagttggaggatatacttgaaaaagaaggattgtcaacaaacccctctgaaaaagaaattaaagcagtcaagaaaagaaaggaaagagcaaaggaactcgagggcatagatatgagcaacattatcacaagttctcgtcggagaagtacatcgaatttcatacccctgccaacgcctaaaatagtagctgatagtgatgaagatgacgaagaagacgcagaagatgacaatgatgaggaggtgaatgtggagggtggagatgaaggtgacaatgatgttggaaaagctggcgatggatctgctgatgatgctgagcacgacagtgattga</cdnaseq>

Protein Sequence

<aaseq>MEPDAAAAAAAGEREAEIEKAFRARLPDFRKQADSLTLEGVRRA LEKDMGLEKHSLDAHKKFIKQCVDKVFSGSDDDNTNNNAPEKDEAKDDRSSKEESEDA QPTSDSNKISSNADEPVAKSSETDRDQEGDKDHSSGSDISEATIKNAIVKRASYFREN SETITLQGVRRTLEEDLKLQKKALDAYKSFISTELDNILQEPANGTKKTSKTESHKDS GQKTSKNSKRARQDSDTSEINDSHCERGDSDEDARPKKKKAEKGKAVKRQKKTTVEKQ LSNSKAKKVAKKDLDKSKERSGSEEDNSNSSAEEDNKKKRQVAPAYGKRVERLKSIIK SCGMSIAPTVYRKAKMAPESKREACLIKELEDILEKEGLSTNPSEKEIKAVKKRKERA KELEGIDMSNIITSSRRRSTSNFIPLPTPKIVADSDEDDEEDAEDDNDEEVNVEGGDE GDNDVGKAGDGSADDAEHDSD</aaseq>

Gene Sequence

<dnaseqindica>131..231#1122..1227#3055..3332#4507..4612#4732..5079#5157..5233#5312..5436#5804..6055#6234..6256#gtgtcattttcgtccacgccgagacgagacgagacagtcgggcgacgggacagcagctgcagcctgcactgcagcacagccgtcagccgcctccccaacctcccgccgccgccgccgccgccgcatccgcatggagcccgacgccgcagcggccgcggccgccggcgagagggaggcggagatcgagaaggccttccgcgcccgcctccccgacttcaggaagcaggccgagtgagcgcgcccgccctctctctccctttccctcttccaccccccctctctctcaggctgtggtcggctctcccgcgcgggatggtttggtctacgcgggcgcggcttctagggttcgttcctgtgtctttggctgcctgcctcgcgtcgcgcccgggaggttgttggcggtggccctagggtttttcggcggcggcagctggtgcacgcttgcggggggtttggtgtccgctttttgggtttcgaaccggggaggggtttatggcctggttggttgtttccaatcttcgattttagttcgggattcttctgctgctgcgggtggtcggcagggttgtgaaggagaagcaagggggagtgatgccgattcctagggtttagtgggggggagggaaaccaacaatttcgtattagcaggtgtgtgcaccaaatatttctgttctacctccaaattcgtcaggttctagctaggatttgacaaggtggtacttctgatttcagaaatgttgtgatttcagaaatgttgctgggcgacggttggttatttagttgcgcagggttctgaagaaccacgtgtagttgcagccttgtattcagcatttcagctatttaaggataataatggctgtgcatcagatttcttgtgtctctctaggtatttaaacctgtaaggaagaaatgaaaagggtttggcgatatgtgagtgataaatgtatatagctgctgcatataaagcatcctagggttgcattctccctaattttcacgcaggcaggagaggtcgatgctttcttctaattactagaaattcgaaccttttctgctctctagatctcttatattggtcaactatgaggaatgacaccacatatatttttctttcttttcagctccttaaccctcgaaggtgtaaggagagcactggagaaggacatgggcttggagaaacattcacttgacgcccataaaaagttcataaagcaatgtgtagacaaggtacgggtggacattaatgtatatggggtttggtgcagtgcaataattaggaaaagaagaacatttgtgcaactaatgtttttgctgtatgaacctgggagctgtacaattttggaatttcctagtgcaatagttaggaaaagaagaacacatttgtgcaactaatgttttctctctatgaaccagggagctgtataatttcctagtttaaactcttgactcttcacttccaacaaaaatagaaaccactgataatatcttgtgttcaaggccaatttttgacttttcaatcgtctgtggaaactaagtaaacataagtacataacatattttgtcaataatgcggaataaatgtttgctatttaaacacaccgctgcagaaacaattactcctgcttgagtgcattaatttgtgcaagtgattttgtgatgcactgtttcagttttcatatactccctccgtcccacaatatagctacctttaggttcaaattttgtcccaaatataactacctacaatatgtagaaagtaacttttaccacactacttcccatgctacccctagtaggccatatcatcccatcaaccctcgagatccacacccacccgtactattcttgattcccgtcacctcaccatctattaatgagggacttttagacctttcactccaatccagaattcctcaaaacactcctatgtagctatattttgggacggagggagtacattagcttggggagctaacatgtcagcatgcattacgattgggcgtttgagctgtgcgaaaagaatcagttgaacaatcataaacatgttattgcagaagcaaaaaaatgagtatgttaaccattggctctgagtatctgactagtaccggtttctgttgttacagcagtacataccaagacaagacagttggcattttaaagattatattgtaattaggatcctgcatgcaaatctcaaatttggtagtttatcatggttggttacgcatcttcaggattccttgtttagagatggacagatggcttcttagtggtcaactcaagccatcctccatctatataaggatgatatggtattatgatgtattttatgttggagcaatggagtaacaaaagaagataatccgaatatcagttttgttgtgttctcttctcttggcctgctattgtgtagatctagtccctcctaaccaagtcccgcattcacagagcagcattctacctcaaatcatcactgtccaatgtctctttaacgggtgttggctcatgttgtgaactagttcaacatcagttgccaattctgatacaataaaagaatgactagagtacaaaacaagtatttacctaaccagtatttctgaagatgaaatatattaagctcacatgtgttgatataatcttttcctttgaggaatatatattaaaatcaccattcacaagcaggagccacaaggatctctttggaacttagacactgtagagactagagagaataattgagtctgtccttatatttgttacaattgtgttatggaaaccaaatgtcttgatatttcaagtgtcaagctgtttttcttgaacctctcttcacccagtttatgcaaattggtaatgagatcctttaattcagatgaataattacctttatttaaacttctgaaggtcataaaacttgttcagttgtcatttatactttatattcccagttggaacctgttagcttgtatttgggaactttcaaactttattgaactctgatttcagtacagtaatactcattttttcctttttctttttggctaagcacatcaacaggttttttctggttctgatgatgacaatacgaataataatgcaccagagaaggatgaagctaaagatgaccgttcttctaaagaagaatcagaagatgcccaaccaacatctgactcgaacaaaatttcctccaatgctgatgagccggtggcaaaatccagtgagacagatagagatcaggagggagacaaagatcatagttctggcagtgacattagtgaagctacgataaaaaatgctattgtcaaaagggcctcatattttagagagaactcagagtatgtgtcctcaacttgccattcttaaattgtacttatcattgaaacttaatagttaacatgcactccaaattatcatgtgtcagattgatcagcgaatcattgtacttgacaacttgtagagttgtagtctcaaaagcctcttgctctggaatgtaatgaaaccttgtttttttaaaaagaaatatttaaccccactacatcacagagcagatatctgaaaagatactatcatgttattgtaattttttgacactagaaaacaaaactggaggttggggcagtaaaatgagtcaaccaaaatatagtcaaccttttgtgacctgattgagtaataatagagaaaccatttagttgttccacatcttgcggtgaaacatatgaataagggacgaaagtagagataattgctcccattgtgtgatgcaagcggtgagcagggagatttcgttgcgtgctagttcacttatacaattctgagtgacaaatttgtggggggccatgccgagggaggggggggggggatatgggtcttagctggtaaaagaaaaggccattgagtcattcttaatgtagaccgtctaaaaatgaacaggagcccagttgtgtgcactgatctgaatatacatttggaacataatgattgaaactgttgagttttacaaagaaaattgcctatatgttcttaaaacatatcattcttgttgttaagagtggtgtgcggccaatattatataggacatgatcatatgtgatgcagttctttagagttatgaaccaattggcgataaacggaaatataggaatttgcttatattgtatgtgttcgtcttgagatgaattcttaggtgctaatgacttataaacgacacatattaaagagtctattctagaatatctgagtttctagctttattatttggacatttggcaagaaattttgtaagaatacttaaatcgtaccatcgtattttccccctaaggatgtggttacttcctaagtatgtccaatcatgttacttcagcattttactttattctggtttaaattttggattctgcgccatacggatgcttgctgccaccaaaagcatgttcgatgtccactttacctgctcatattgcatttggctagtcagcttcagcatgtattcacaatatgaaagcaatgcagaactattactttacaaggagttcgccggactttagaagaagatctcaagcttcagaagaaagctttggatgcttacaagtcttttatttcgacggaattagacaatgtaagtttaaagtttggattgagggtgcagcggtgcacacatgtattagttcagatgcatgttgatgattggactaagaagtcgaactcattgtgtttcattaattttctgtgtgacagattcttcaagaacctgcaaatgggacaaagaaaactagtaaaactgaatctcataaggattctggccagaagacaagcaaaaactctaagagagctcgtcaagactctgatacttctgaaataaatgatagccattgtgagaggggagacagtgatgaggatgcaaggccaaaaaagaaaaaggctgaaaagggcaaagctgtaaaaaggcagaaaaaaactacagtggagaaacaactgtcaaattcaaaggctaaaaaggttgccaaaaaagatttagataaaagtaaagagcggagtggatcagaagaagataattcaaattcatcagctgaagaagataataaggtattttgtgtgagttcttgactgcatgattagtgtaaatataattttggctaacttgtttatatctcaatatgcagaaaaaacgacaagtagctccagcttacgggaaacgggtggaacggctgaagtcaataatcaaatcttgtggaatgaggtacttctgcatgcttgaatgcagttttatggattttcggaatgataaatttaccgacttatgtttatttttaactagtatcgcacctactgtgtatcggaaggcaaagatggctcctgagagcaagcgtgaagcctgtttgataaaggagttggaggatatacttgaaaaagaaggattgtcaacaaacccctctgaaaaaggttcatttgttgttaaattgtttacaataacttgtgcgggaaaagttcatttgttgttaaattgtttacaataacttgtgcgggaaaacttgtgttgaattgttttctattttttctatacttctatgggtaggattaggatgtttggtatcacagtcatcattcaattttctcccaaactatgaacactacataaggtgtatgtgcccaataataagttattactgttaaatgcaatcttatgacctcacctatttctctcttttttttagttggttcatttatgagtggcatataaagctgcgtatatatggcgtaaagcatacctatataattacttgacacatgttatgctttctttgtacagaaattaaagcagtcaagaaaagaaaggaaagagcaaaggaactcgagggcatagatatgagcaacattatcacaagttctcgtcggagaagtacatcgaatttcatacccctgccaacgcctaaaatagtagctgatagtgatgaagatgacgaagaagacgcagaagatgacaatgatgaggaggtgaatgtggagggtggagatgaaggtgacaatgatgttggaaaagctggcgatggatctgctgatggtaagattcaataatacatggtatttcaatttcactgtcaccagctagtcatttataatctcattagttattgcatccaggggaatatccagtggcatttacagcatgttcagtgttatttcgcattccaagcgattccatatctctttttctcaataaaatccatatgcttctgcagatgctgagcacgacagtgattgattcttgcggtttctaaggtggaagcaggcaattctgaccatgcaagttcatctcatgttgatttggcctagacgcctagttggctgtccgtgcgtggatggaggcagttgttcagaagtttaacttatgagtttattctgtttattcgaaacatattctttagctctagcgttggtgaaacattagcgcagatgattcttgtagctcccatctcattattatgtataatatatatcaggtttgttatctg</dnaseqindica>

External Link(s)

NCBI Gene:Os11g0544600, RefSeq:Os11g0544600