Os11g0544700

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Revision as of 09:12, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os11g0544700| Description = Repressor protein| Version = NM_001074587.1 GI:115485822 GeneID:4350685| Length = 3498 bp| Definition = Oryza sativ...")
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Gene Name

Os11g0544700

Description

Repressor protein

Version

NM_001074587.1 GI:115485822 GeneID:4350685

Length

3498 bp

Definition

Oryza sativa Japonica Group Os11g0544700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 11

Location

Chromosome 11:21894713..21898210

Sequence Coding Region

21894757..21894789,21895930..21896002,21896458..21896551,21897254..21897370,21897455..21897512
,21897584..21897985

Expression

GEO Profiles:Os11g0544700

Genome Context

<gbrowseImage1> name=NC_008404:21894713..21898210 source=RiceChromosome11 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008404:21894713..21898210 source=RiceChromosome11 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgaggaagaagctgggcacccgcttccccgcggcacggatcaaaaagatcatgcaggctgatgaggacgttggcaagattgcactagctgtacctgttttagtatcgagggcccttgaattgtttttgcaagatttaattgaccgaacttacgaaattacactgcaaagtggtgcaaagacattgaattccttccacctaaagcaatgtgtgaggaggtacagttcttttgacttcctaactgaggttgtcaacaaggtaccggacctcggtggcgctgactcatgtggagatgatagagcattacccagaagaagaaaagccttgccaaatggaagtgacccagagaatgaggaatctcgatcaagcaaaatggccgtaagaagtgcaaatatcagtcccagaggacgtgggagaggtcgaggtagagggcgaggacgaccacccaccaagcggaaggaagttggttatgtacaatttgaggatgagagcagcatgtttgctgatcagggcgaagccttaccaggagaggagacggttccagagaccatccatggcaccgagagcgtacctccaagcacacaccctccagcagaagccccatcggcagcagagataccagctccaaatccaaaggtggaagaagcgaaaaacgacgaccatcagccggattggcctatgccagatgcgattggaaacatcggtgtcggaccatccggttttggacatcttacggtgcaagttgacgaggatgaggactacgacaacgaggattag</cdnaseq>

Protein Sequence

<aaseq>MRKKLGTRFPAARIKKIMQADEDVGKIALAVPVLVSRALELFLQ DLIDRTYEITLQSGAKTLNSFHLKQCVRRYSSFDFLTEVVNKVPDLGGADSCGDDRAL PRRRKALPNGSDPENEESRSSKMAVRSANISPRGRGRGRGRGRGRPPTKRKEVGYVQF EDESSMFADQGEALPGEETVPETIHGTESVPPSTHPPAEAPSAAEIPAPNPKVEEAKN DDHQPDWPMPDAIGNIGVGPSGFGHLTVQVDEDEDYDNED</aaseq>

Gene Sequence

<dnaseqindica>45..77#1218..1290#1746..1839#2542..2658#2743..2800#2872..3273#gtggaggagcggaggcggaggcgaacgcgaggaggaagacgaagatgaggaagaagctgggcacccgcttccccgcggtacgtagcccctcctcccctcccctcccctcccctctcctctcctcgatctgcgctgcggcggcggcggctcgtgatccgatctggtcggcgcgcgcggatctcgcggcggcggcggcggatatcgccgttgaccggcggggtacttgcgcttctctctgtgcggtcgcgcttcgtcgccgggtggttgtggggattcggaatcgagagcaggttgtggtggggggctctttgtctgtgttgcctcgccagtgagcttagctgaaattttatttttactcactctcgttgagttttctttcggttcgttggtggatggaggtggttcgaggtggtggggcaagtggttctactgggggtttgggtttgggtttggtggagggaaaagattcttgaattcgagggcgagatgaatgagcaattagttctggtaggtgcaaagctgagcaggcagctagctaggatgggctgcaattggttgcagctgcttccaggatgcgtgtaaagagggctggatttctcatcttgtagtttgtttctcatgagatctcctcaacacgcgagcttgtatcgcactgtttctggaggcatgaaatggattatggcctgctcgggcagtttctggagttcttgtgcagtagagttctacttgtgtggcatatatcgtgagctgtattgtctgctgggaacctgttctacgttttatactgctcaaattgtcatgagatgggcatcagccagaatttcaaatttacacagaactatcttctttgagagtgctggtatgaattttagctgaatactcccgtcttcattactattttgagacctttccatgtgacatggcactgtgaactgcgttttttgagacctctgattactgaacgttttgttttgttttgtttttgttttttttttccctcttgcctgtactgattactgaaattcagatttttcttgttagtgtttcttagcattaccttgtgtgactttttcatgatataggacgtactctttaggattaccttgtgttccctacatatcggtatatcaagtgtatgctggaggattatatatttcaaatataacccagttttgaacactgtgaaatcattttttctgttctttttgttgtgacaggcacggatcaaaaagatcatgcaggctgatgaggacgttggcaagattgcactagctgtacctgttttagtatgtaagttttgacaacagcctgtgctacttctttttgggtattgatgtagccatgtagtatgtaaacagttgtgttatcgctccattctctctaggggttggtacttacaaaaaaatgcaatcaagaaagcattctgccaaaagtttgtcttacattcagtaagctgaactagcgacaagtttgctctgccacatggagaagaacccaactcgcctttttatgccaagtcactggtcacatattttgacatcggttgttgcccattagaaaaataatcgttttgcatttcatttttgtttcactaactaattgatacacattttcttgtatgataatatatgtgttttggagtaccttttttggtttgttttgcataatgttacagttctagttattgccatgataaagcatacaacctgagtgcctgacattctgaatttgttctttacgtgcagcgagggcccttgaattgtttttgcaagatttaattgaccgaacttacgaaattacactgcaaagtggtgcaaagacattgaattccttccacctgtgagttctataccactgcacttttaaaattttactccgcattatgattttgtgcttttatggagtgatgtactgtttatcctttcatgtttttgtgacctatgaaaagcttgtgttgagtttcattgaagtatagcagtgtctttgatgaattattctggaacaaagaatgatttcatttttatctactataatttccatcaaatctggttatctttgtattattgtcttcaaattaattaacttaaaatctgagtttttaacacaaaagcaaagttaaattttcactctttttttaaccaatttgaaaatggcatatgcttctcactgcaagttgataatattgtggtatttttacctgagctctaggagaatatggatggtatgtcttccaaattgaaattagactcggacgatcctgcttatgggtctaaatatgtctgtcagactctatttattatttgttcatctttaaattgagctttaattgatgtttatataaataattgattagttttttcttagtattctgtgagtgttgctatacgaatgtcctctgttctttactgtgttcaatttcaagctttgttagctacaagtgaataagacttttgtgttctctgtaaactgtttgcacaatttaatttttgttggatgtttcagctttgtatcttaagtggttacttgtcttatataattcagaaagcaatgtgtgaggaggtacagttcttttgacttcctaactgaggttgtcaacaaggtaccggacctcggtggcgctgactcatgtggagatgatagagcattacccagaagaaggtaaattcacataatataaatgactgcctgactcactgtagaaactacacgtaccttattaatgcttgaaattcattttttcagaaaagccttgccaaatggaagtgacccagagaatgaggaatctcgatcaagcaaaatggtatatcttctcgcataacgcattaagttttcacaccgggctagtcggtaatagaataattgctttcgcaggccgtaagaagtgcaaatatcagtcccagaggacgtgggagaggtcgaggtagagggcgaggacgaccacccaccaagcggaaggaagttggttatgtacaatttgaggatgagagcagcatgtttgctgatcagggcgaagccttaccaggagaggagacggttccagagaccatccatggcaccgagagcgtacctccaagcacacaccctccagcagaagccccatcggcagcagagataccagctccaaatccaaaggtggaagaagcgaaaaacgacgaccatcagccggattggcctatgccagatgcgattggaaacatcggtgtcggaccatccggttttggacatcttacggtgcaagttgacgaggatgaggactacgacaacgaggattagccacggccatcttctgattgttatgcactaacagggcagttctcctggtgttgtaaaatgtaaatatgtagctgcagctagctgtgatgtgctgctgatgtaatgcagtatgtagttgtcccgtgtaactttgtctgttttccaataattgcttgctagttgcctcacattgttgacatgattgactactgaagtgttttgtcagaattaacccggtattgaagc</dnaseqindica>

External Link(s)

NCBI Gene:Os11g0544700, RefSeq:Os11g0544700