BGIOSGA005177

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Revision as of 11:17, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA005177| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA005177, complete gene.| tag = OsI_052...")
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Gene Name

BGIOSGA005177

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA005177, complete gene.

LocusTag

OsI_05216

Ensembl Transcript ID

BGIOSGA005177-TA

Ensembl Protein ID

BGIOSGA005177-PA

Length

3295

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:45906784..45910078

Sequence Coding Region

45906784..45907572,45907813..45907851,45908362..45908445,45909006..45909088,45909176..45909263
,45909411..45909665,45909950..45910078

Genome Context

<gbrowseImage1> name=IndicaChromosome01:45906784..45910078 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:45906784..45910078 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGACGCCGCCGCAATGGAATCCCTCATCCTGGAGCTCCACGCCATCGAGGCCGTCAAGTTCGGCGCCTTCGTGCTCAAGTCCGGCATCACCTCCCCGATCTACCTCGACCTCCGCATGCTCGTCGCCCACCCGCGCCTCCTCTCCACCGTCGCCTCCCTCCTCGGCTCCCTCCCGGCGACCCGCCCCTACGACCTCCTCTGCGGCGTCCCCTACACCGCGCTCCCCATCGCTTCCGTCCTCTCCGCCGCCGCCTCCGTCCCCATGCTCCTCCGCCGCTACCACGTCACGCCGCACGCCGCCGCCGAATGCCTCGATGGGTCCTTCCGCGCCGGGGACGCCGTGCTCATCGTCGAGGACCTCGTCACCACGGGCTCCTCCGTGCTCGAGACCGTCGCGCCACTCCGCGAGGTCGGGCTCGTCGTCGCCGACGCCGTCGTGGTCATCGACCGCGAGCAGGGCGGGAGGGAGAACCTCGCCGCGAACGGGGTCGCGCTCCACTCGCTCATGACGCTCACGGAGGTGCTCGCCGTCCTCGTGAAGCGCGGGAAGCTGGGCGAGGAGAAGGCCCAGGAGGTGAAGCGATTCCTCGACGCAAACAGGAAGATGGCTGTGCCGGGACTGCCGGTTAAACCGAAAGTAGTTAGGAAGGCATTTTCTGAGAGAGCTGGATTGGCGACGAATCCGATGGGGAGGAAGCTGTTCGAGTTGATGGAGGCCAAGCAAAGCAACTTGTGTGTTGCTGCAGATGTCGGGACAGCAACAGAGCTACTTGATCTCGCCGATAAGGATGATATTCTTCTACTTCAGTATTATTCCCTGAGTAAGATTGGTCCAGAGATCTGCATGTTGAAAACTCATGTGGATATCTTGTCTGATTTTACACCGGATTTTGGCCACAAGCTCCGTTCGATTGCTGAGAGGCACAGCTTTTTGATATTTGAAGACCGCAAGTTTGCAGACATTGGAAACACAGTAACTATGCAATATGAAGGAGGAATATTCCGCATATTAGACTGGGCTGATATTGTTAATGCACATATAGTTTCTGGACCTGGAATTGTAGAAGGCTTGAAGCTGAAGGGTCTGCCAAAAGGAAGAGGGTTACTTTTGCTTTCTGAAATGAGTTCAGCTGGCAACCTTGCTCATGGAGATTACACTGCTGCAGCCGTGAAGATTGCTGAGCAACATTCTGATATTGTAATTGGATTTATATCAGTAAATCCTGCATCTTGGTCAGTGACGCCGTCAAGTCCAGCGTTCATCCATGCTACTCCTGGAGTTCAGTTGGTTGCTGGGGGAGACTCGCTTGGTCAACAGTACAACACTCCTTACTCTGTCATAAACGACAGAGGCAGCGACATAATTATAGTCGGTCGTGGGATTATAAGGGCGAACAATCCTGCTGAGACCGCGAGAGAGTACCGCATCCAAGGATGGCATGCTTACCAATCCAGCTTATCATGA</cdnaseq>

Protein Sequence

<aaseq>MDAAAMESLILELHAIEAVKFGAFVLKSGITSPIYLDLRMLVAHPRLLSTVASLLGSLPATRPYDLLCGVPYTALPIASVLSAAASVPMLLRRYHVTPHAAAECLDGSFRAGDAVLIVEDLVTTGSSVLETVAPLREVGLVVADAVVVIDREQGGRENLAANGVALHSLMTLTEVLAVLVKRGKLGEEKAQEVKRFLDANRKMAVPGLPVKPKVVRKAFSERAGLATNPMGRKLFELMEAKQSNLCVAADVGTATELLDLADKDDILLLQYYSLSKIGPEICMLKTHVDILSDFTPDFGHKLRSIAERHSFLIFEDRKFADIGNTVTMQYEGGIFRILDWADIVNAHIVSGPGIVEGLKLKGLPKGRGLLLLSEMSSAGNLAHGDYTAAAVKIAEQHSDIVIGFISVNPASWSVTPSSPAFIHATPGVQLVAGGDSLGQQYNTPYSVINDRGSDIIIVGRGIIRANNPAETAREYRIQGWHAYQSSLS</aaseq>

Gene Sequence

<dnaseqindica>1..789#1030..1068#1579..1662#2223..2305#2393..2480#2628..2882#3167..3295#ATGGACGCCGCCGCAATGGAATCCCTCATCCTGGAGCTCCACGCCATCGAGGCCGTCAAGTTCGGCGCCTTCGTGCTCAAGTCCGGCATCACCTCCCCGATCTACCTCGACCTCCGCATGCTCGTCGCCCACCCGCGCCTCCTCTCCACCGTCGCCTCCCTCCTCGGCTCCCTCCCGGCGACCCGCCCCTACGACCTCCTCTGCGGCGTCCCCTACACCGCGCTCCCCATCGCTTCCGTCCTCTCCGCCGCCGCCTCCGTCCCCATGCTCCTCCGCCGCTACCACGTCACGCCGCACGCCGCCGCCGAATGCCTCGATGGGTCCTTCCGCGCCGGGGACGCCGTGCTCATCGTCGAGGACCTCGTCACCACGGGCTCCTCCGTGCTCGAGACCGTCGCGCCACTCCGCGAGGTCGGGCTCGTCGTCGCCGACGCCGTCGTGGTCATCGACCGCGAGCAGGGCGGGAGGGAGAACCTCGCCGCGAACGGGGTCGCGCTCCACTCGCTCATGACGCTCACGGAGGTGCTCGCCGTCCTCGTGAAGCGCGGGAAGCTGGGCGAGGAGAAGGCCCAGGAGGTGAAGCGATTCCTCGACGCAAACAGGAAGATGGCTGTGCCGGGACTGCCGGTTAAACCGAAAGTAGTTAGGAAGGCATTTTCTGAGAGAGCTGGATTGGCGACGAATCCGATGGGGAGGAAGCTGTTCGAGTTGATGGAGGCCAAGCAAAGCAACTTGTGTGTTGCTGCAGATGTCGGGACAGCAACAGAGCTACTTGATCTCGCCGATAAGGTATACTATAAGATAATGAATTGTGTAGATGTTTGGTAAACTTTAGAACTTAACAGTCAGGAAGTCAATTTCTCCTTTTTAGGCTATTAAGAATGGGTAATTTTATTAGGTGTATATTAGGATGATATCGGTCTACTTCAGTACTATTCCGAGTTAGGTAAAAGGCAGATTTGGGGCTGTGTGAATTCCTCCCAATTTATGGTGCTTGTTTATGCCTTATGAAATGTTTGGTTATGTTAGGATGATATTCTTCTACTTCAGTATTATTCCCTGAGTAAGGTAAAAGGCAGATTTGGGGTTGCGTGAATTCCTCCTGATTTATGGTGCTTGTAGCCTTGGAAATGTTTGGTTATGTTTAGTCATGTGAAACTACAATCCTTGATAGATGATTCTGTGAACAAATTGATTTGTTATTGTCGTATTATTCCTTTTTATATAGACCAGTTTCTTAGTTTCATACTTTTTTGCCATCACATCTTCTCTTTCTCTTACATATTTTCTATGCTTAGATGATGCAGTATATCTTTCACATCTAGTGTTGTGAATAAAGTGGTCTAATATACAGTCATTGTGTGGGTGCAGTTTCTTCACTAAGATGGCATAGATCTACCTTTTCACTATTTTACTGAATCCCATTTGATACATTTGCATCGTCTTTCTATATATTATGAGGTAAGAGCATATTGATTTTGTCCTGGTTCTTTTCGTTTTTCTTTTTGGTTCATTAGTTTGTTATTGCTAAGTGAACCCTTTTAATCTGTTTAACTTAGTGCTCCAATTCTTATGTAGATTGGTCCAGAGATCTGCATGTTGAAAACTCATGTGGATATCTTGTCTGATTTTACACCGGATTTTGGCCACAAGCTCCGTTCGGTATGTTCACTTATGACTTGATTGTCCTTTTATTTTCACCATCCTTTGGTATTAGTAATACTTGTCCTGAGTAGTTTCATACTATTGCAGAACTCCGGATAGAGATGTAAAATTGGAGTTTGTTTTCTTGGAATCAAGTGTGGGGTTTTTACCCACTACTCTTTTAAAAGTATATTTATGCTTTTTGCCCATGATTATGGATTGTCATGCCCATCAGTATAGAATGTCTTCTTTCATGCTGTTTTCATATGGGACATGCTTTATTTTTTGCATTTAGTAGGCGTATGCTTATTGGATTTATTCTGTGCACCCACCATAATGCCTTTTGTGTTTTGGGTACACTAGGCATTCGAAGGCAATCAGCTCTGTTTACTATCAGTGCTTTTTTTTAATGAATTACTAGAGCTCATTTGTATATATCATTATATCAGTGTAGTATTGGCTATTCGTGATGCTAAAAGCTACTGGCATAGCTACTACAAAAAAAAAAGCTACTGGCATAGCTTAGTTTTGATGTGTTTCATCTTATATTTAATTTGTTCTTAAAATTTTACTTGAAGATTGCTGAGAGGCACAGCTTTTTGATATTTGAAGACCGCAAGTTTGCAGACATTGGAAACACAGTAACTATGCAATATGAAGGGTGAGAAAAGTCTATTTTTGACTGTATATATAAGTTCATTTCTGTTATGCATACACAATATAGTTAATGTCTTTTGTGTTGGTTCAGAGGAATATTCCGCATATTAGACTGGGCTGATATTGTTAATGCACATATAGTTTCTGGACCTGGAATTGTAGAAGGCTTGAAGCTGAAGGTATGCTATTTACGTAGTGCCATGCCCTATGTGATCAACGATGAGTTAAAAAAAAACAAATCAGAAATTCAATGTTGCTGCTGCTAATAGCTTTTGACTGTTGTAGTGCCGGCTACTGAAGGTTAATGTTTTGTTCGTTTACTGAAGGGTCTGCCAAAAGGAAGAGGGTTACTTTTGCTTTCTGAAATGAGTTCAGCTGGCAACCTTGCTCATGGAGATTACACTGCTGCAGCCGTGAAGATTGCTGAGCAACATTCTGATATTGTAATTGGATTTATATCAGTAAATCCTGCATCTTGGTCAGTGACGCCGTCAAGTCCAGCGTTCATCCATGCTACTCCTGGAGTTCAGTTGGTTGCTGGGGGAGACTCGCTTGGTCAACAGTACAACACTCCTTACTCTGTGAGTTAAAACATTGGCAATACATACCCTTTTTGCTGACTGATATTCTGTTGTCTTCACACCTTACTGCTTTTAAGTTTTTTTAATGGATAATAACTAATGCAGTCTGCTTAAGTTAGCAATTCGAGATTACCAGTATTCATCTTCTTTGAACTATAGTTTTCATCCAGTTTCAGTTAATAACCTTCATCCATTCTGATAGCTTTTGGGCATTTTTCTTCTGATGCAGTCTGCTGCTCTGCTTATCTGATGATATATATCGCTTACTTTTCTGTGAAATACAGGTCATAAACGACAGAGGCAGCGACATAATTATAGTCGGTCGTGGGATTATAAGGGCGAACAATCCTGCTGAGACCGCGAGAGAGTACCGCATCCAAGGATGGCATGCTTACCAATCCAGCTTATCATGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA005177

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA005177&oldid=42901"