BGIOSGA005181

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Revision as of 11:17, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA005181| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA005181, complete gene.| tag = P0431G0...")
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Gene Name

BGIOSGA005181

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA005181, complete gene.

LocusTag

P0431G06.4

Ensembl Transcript ID

BGIOSGA005181-TA

Ensembl Protein ID

BGIOSGA005181-PA

Length

5033

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:45949283..45954315

Sequence Coding Region

45949283..45949728,45950302..45952824,45952912..45953125,45953219..45953470,45953545..45953604
,45953722..45953852,45953974..45954088,45954160..45954315

Genome Context

<gbrowseImage1> name=IndicaChromosome01:45949283..45954315 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:45949283..45954315 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGGCGGCGACGAGGAGGAGGTTGCCGGTGACGTGCGCCGCAAGTTGGGGGGCTACCTCCGCGCCGTCGTCTCCGTTTCATCCGATGTGGGCGTGGAGGCGCTCGCGCCGCTTTCCCCGTGCTCGCTCTTCGCCTGCGGGGGCGTCTCCCTCGCGCCGATCCCCGACGGCGGTGGCGCGACGCCGCGGTCCAAGGGGAGGGCGTGCGGCGGAGGGGGCGTCGTGCGGCAGCTGAGGGCGCTGGTGTCGAGCCGGTGCGTGGAGGTGGAGGGGAGGGTGCTGAGGGCGGTGGCGAGGAGGGGGAGGGAGGGAGGAGGAGGGGATGGGGAGGTGGAGGCGAGGGCGGTGGTGCTGTTCGACGTGTACCTCCCCGTCTCCGTCTGGTCGGGGTGGCAGTTCCCGCGGTCCCGCGCGGCCGCGGCCGCCGCGGTCTTCAAACACGTCAGTTGCAATTGGGATGCCAGGAATGCTTTGCTTGCTTTTAACTGGACCTCTCCTGACAATCCACACTGTGATGACCAGTATATTTGGACCTGCACCGATTGCCACGTCCTTGGTTGTGAGGTACATCAGATACCATCTGTATTGAATAATGATAAGTCGTTTGACCTGCATGAAATCTTCAAAACTCTACCTAGTGTTATGGTGGAGAAGAGGATGCAGATAACAAGAATAACACCAGATGAGGCAGCATCGGGAGTGGGTATTTGGTCTGTCCCTGATGATGTCTTGTATAAGGTGCTGGTTCGACTGAAACCCAGAGATTTGATTAGAGTTGCAGCTGCTTGTCATCATCTAAGGAATCTTTCTGCTTCTATCATGCCTTGCATGAAACTTAAGCTTTTTCCTCATCAAGAGGCAGCTGTTGAATGGATGCTAAGGAGGGAGCAGAACTTGCAGGTCCTAGAACATCCTCTATACAAGGGTTTGTGCACCATGGATGGTTTCCCTTATTACATAAATGTTACCTCTGGTGAAATATCCACTGGTAGTGCTCCAACTGTACATGATTTTTGTGGAGGTATGTTTTGTGATGAACCTGGGTTAGGGAAGACAGTGACTGCACTGTCTCTTATTCTGAAGACACATGGGACTCTGGCAGTCCCTCCACCAGGGATGAATGTTATGTGGTGCATGCATAAACCAGATAAAAAATATGGATACTACGAGCTTAGTGCTAGCAACTCTTCTAATGGAAACATCTTTTTGTCGGGATCAAAAAAGTTGCGAAAGGACGTGATTAGAGAAGATACATGTTCAAGTGAGTCACTGAATAATGGTGGTTCAGTTGTTAGTACAAGGTCATCAAGAAAGAGAGGCAGGTTAGTAAACCCTGATTTGAATATGATCGCTGCACATCCGAGTGGGAAGTCGCCAATGTCAGCACCAACTGGTGCTCATTCAACTCCAGCTACTCATGTGCTAAAGATTACCAAAAACTTGAAACATGTTAGGAAAAACCTCATGGAGGCATATAGCGATGGTTCAGTTGGCAATAAAAGGAAGAGAGATGCCACCTCTGAGTTAAGTGAAACCTGGGTTCAATGCGATGCTTGCAGAAAGTGGCGGAGATTATTGGACGGAACTGCACTTGATTCCAGTACAGCATGGTTTTGCAGCATGAACCCTGATTCTGCACGTCAGAAGTGCAGCATCCCAGAGGAATCTTGGGATTTAAAGCGAAAGATAACTTATTTGCCCGGATTTCACAAGAAAGGTACACCACCAGGAAACGAGCAAAATGCATCTTTTTTTACAAACATATTGAAAGAGCATGCTGCTTTGATCGATTCAGAAACCATGAAGGCTTTGTTGTGGTTGGCGAAACTTTCTCCCAAGAAACATATCGAGATGGAAGCAGTTGGTTTGACACGGCCAGTTCTAGATGCACGTGCTAACATAGGAAAGGGTGCCCGCCCGTATTACAAGATTTTTCAAGCATTTGGCCTTGTGAGGAAGGTTGAGAAAGGCATAACTCGATGGTATTATCCATCTATGCTTGATGATTTGGCATTTGATTCGGCTGCACTTGGAATTGCCCTTGAAAAGCCGCTGGATTTGGTGAGGCTTTATTTGTCTAGGGCAACCTTGATAGTGGTACCTGCTAACTTAATTGATCACTGGACAACACAGATACAGCGGCATGTTTCCTCGGACACACTTAATGTTTATGTATGGGGAGATCACAAGAAACCATCTGCTCACAACCTTGCATGGGACTATGACATTGTCATAACCACATTTAGTAGATTAAGTGCAGAATGGGGTCCAAAGAAGAGAAGTGTTTTAAAGCAGATCCATTGGTTTAGGGTAATATTAGATGAAGGACACACATTAGGTTCCAGTCTCGCCCTCACAAACAAATTGCAGATGGCTGTTTCATTGGTTGCTTCTAATAGATGGATTCTAACTGGTACCCCTACGCCAAACACACCAACTAGTCAAGTTGCTCACCTTCATCCCATGCTTAAGTTTCTTCATGAGGAAGTTTACGGTCAAAACTACCAGTCATGGGACACTGGAATTCATAGGCCTTTTGAGGCACAAATGGAAGACGGACGCAGTCGTCTCCTGCAGCTACTTCAGAGGACTATGATTAGTGCAAGGAAACAAGACCTGAAAAACATTCCTCCTTGCATAAAAAAGATAACTTTCCTGGACTTCAGTGAGGGGCATGCGAAAAGTTACAATGAACTGGCTGTTACTATCCGCAGAAATATATTGATGGCTGATTGGAATGACCCTTCTCACGTGGAATCACTTCTGAACCCCAAGCAATGGAAATTCCGTACTACAACTATTAAGAATGTGCGCTTGTCTTGTTGTGTTGCGGGGCATATCAAAGTAGCAGAGGCTGGTCAAGATATACAGGAAACAATGGATGCATTAATGCAGCTGGGCCTTGATCCTTCTTCGGGGGAGTATCAGTCCATAAGATATGCTCTTTTAAATGGTGCCAGCTGTTTCAGGTGCAGAGATTGGTGCCGCTTGCCTGTTGTCACGCCCTGTCGGCATCTGTTGTGCCTTGATTGTGTAGCTCTTGATAGTGAGAAATGCACGTTACCTGGCTGTGGCAACCATTATGAGATGCAGACTCCTGAAACTCGTGCACGGCCAGAAAATCCAAACCCAAAATGGCCAGTGCCCAAAGACCTAATTGAGTTGCAGCCTTCATATAAGCAGGATGACTGGGATCCAGACTGGCAGTCGACAACAAGCAGCAAAGTTGCTTATTTGGTTAATAAGTTGAGAAGTTTGAAGGCAGAAAACATAAAACATGGGTACTCTAGGAACATGGCCAATGGTGCTTGCCTTTCTAGTCAATCTTCTTGTCAAGACCATAATAATGTGGAGGGCAGGTTACCACACACAATGCCTGACAAAGTAATAATATTCTCTCAGTTTCTGGAGCATATCCATGTGATTGAGCAGCAGCTGACGATTGGGGGCATAACATATGCTGGAATGTACAGTCCCATGCCATTAGGCAGTAAGAGAAGTTCACTGACGAAGTTCAAAGATGATCCAGCATGCATGGCCTTAGTCATGGATGGAACTGCAGCACTGGGCCTTGATTTGAGTTTTGTCTCTTATGTTTTTCTGATGGAACCAATATGGGATAGGAGTATGGAGGAGCAAGTTATTAGTCGTGCACATCGTATGGGTGCTACTCGTCCCATATTTGTTGAGACTTTGGCCATGCGTGGTACCATCGAAGAGCAAATGTTAAAACTTTTACAGGATTCCAATGCTTGCAGACAAATGGTGAATAAAGGAACAAGCAGCACTGATAATGAAGGTGCTCGGCCTCACCGGAGCCTGCATGATTTTGCGGAAAGCAGTTATCTGGCGCAACTCAGCTTTGTGAAAGGATCTGACGCGGCGGAAAAATTATAG</cdnaseq>

Protein Sequence

<aaseq>MGGDEEEVAGDVRRKLGGYLRAVVSVSSDVGVEALAPLSPCSLFACGGVSLAPIPDGGGATPRSKGRACGGGGVVRQLRALVSSRCVEVEGRVLRAVARRGREGGGGDGEVEARAVVLFDVYLPVSVWSGWQFPRSRAAAAAAVFKHVSCNWDARNALLAFNWTSPDNPHCDDQYIWTCTDCHVLGCEVHQIPSVLNNDKSFDLHEIFKTLPSVMVEKRMQITRITPDEAASGVGIWSVPDDVLYKVLVRLKPRDLIRVAAACHHLRNLSASIMPCMKLKLFPHQEAAVEWMLRREQNLQVLEHPLYKGLCTMDGFPYYINVTSGEISTGSAPTVHDFCGGMFCDEPGLGKTVTALSLILKTHGTLAVPPPGMNVMWCMHKPDKKYGYYELSASNSSNGNIFLSGSKKLRKDVIREDTCSSESLNNGGSVVSTRSSRKRGRLVNPDLNMIAAHPSGKSPMSAPTGAHSTPATHVLKITKNLKHVRKNLMEAYSDGSVGNKRKRDATSELSETWVQCDACRKWRRLLDGTALDSSTAWFCSMNPDSARQKCSIPEESWDLKRKITYLPGFHKKGTPPGNEQNASFFTNILKEHAALIDSETMKALLWLAKLSPKKHIEMEAVGLTRPVLDARANIGKGARPYYKIFQAFGLVRKVEKGITRWYYPSMLDDLAFDSAALGIALEKPLDLVRLYLSRATLIVVPANLIDHWTTQIQRHVSSDTLNVYVWGDHKKPSAHNLAWDYDIVITTFSRLSAEWGPKKRSVLKQIHWFRVILDEGHTLGSSLALTNKLQMAVSLVASNRWILTGTPTPNTPTSQVAHLHPMLKFLHEEVYGQNYQSWDTGIHRPFEAQMEDGRSRLLQLLQRTMISARKQDLKNIPPCIKKITFLDFSEGHAKSYNELAVTIRRNILMADWNDPSHVESLLNPKQWKFRTTTIKNVRLSCCVAGHIKVAEAGQDIQETMDALMQLGLDPSSGEYQSIRYALLNGASCFRCRDWCRLPVVTPCRHLLCLDCVALDSEKCTLPGCGNHYEMQTPETRARPENPNPKWPVPKDLIELQPSYKQDDWDPDWQSTTSSKVAYLVNKLRSLKAENIKHGYSRNMANGACLSSQSSCQDHNNVEGRLPHTMPDKVIIFSQFLEHIHVIEQQLTIGGITYAGMYSPMPLGSKRSSLTKFKDDPACMALVMDGTAALGLDLSFVSYVFLMEPIWDRSMEEQVISRAHRMGATRPIFVETLAMRGTIEEQMLKLLQDSNACRQMVNKGTSSTDNEGARPHRSLHDFAESSYLAQLSFVKGSDAAEKL</aaseq>

Gene Sequence

<dnaseqindica>1..446#1020..3542#3630..3843#3937..4188#4263..4322#4440..4570#4692..4806#4878..5033#ATGGGCGGCGACGAGGAGGAGGTTGCCGGTGACGTGCGCCGCAAGTTGGGGGGCTACCTCCGCGCCGTCGTCTCCGTTTCATCCGATGTGGGCGTGGAGGCGCTCGCGCCGCTTTCCCCGTGCTCGCTCTTCGCCTGCGGGGGCGTCTCCCTCGCGCCGATCCCCGACGGCGGTGGCGCGACGCCGCGGTCCAAGGGGAGGGCGTGCGGCGGAGGGGGCGTCGTGCGGCAGCTGAGGGCGCTGGTGTCGAGCCGGTGCGTGGAGGTGGAGGGGAGGGTGCTGAGGGCGGTGGCGAGGAGGGGGAGGGAGGGAGGAGGAGGGGATGGGGAGGTGGAGGCGAGGGCGGTGGTGCTGTTCGACGTGTACCTCCCCGTCTCCGTCTGGTCGGGGTGGCAGTTCCCGCGGTCCCGCGCGGCCGCGGCCGCCGCGGTCTTCAAACACGTCAGGTGCGTGCATTGCCCTCTGCTCTTCGAATTTGGGTGGTCGCTACTGCACATGGCTGCTCTTCTCCGGGGAGGTTTAGAGGTTGGGGGCATTTCGTCGATTGAGTGGCGAATTGTTCATGCGCGCCCCCCTGCGATTCGAATTGTGACCTGCATGTGTGAAAATTGTAGTCATTTGTCTCATTTTGTGCCTCACAGTAAATCTGAATTTGGCATCCCCTGATGCGTCATGTCTCTGATAACTGATAAGGCTACAGTTTGCATTCAGTTTCCCATGATCCTATCAGAAGATTTTATTGAAACTGTTGGAAGGTCTTAAATATGTGCCAATTCCAACCTAGGCATTTTCCCATCTGAAATGCTTGTTCATTTTAAATTCAGTGCGTATCACCATGCGTGCTCCTATCAATATTGGCTGAAAACTGCAACAGTAAGTGCATTTCTCATGGTAACTAGTAAGATGCAAATCTAGGACTATGTGATGCACCAAGTGGATCCTGGTTCATGTCTCACTTGTTTCTGTAATTTTCTCATCATTATTACTTACCTCGTAGGCTAAGATTTTTTTTTTTTCAGTTGCAATTGGGATGCCAGGAATGCTTTGCTTGCTTTTAACTGGACCTCTCCTGACAATCCACACTGTGATGACCAGTATATTTGGACCTGCACCGATTGCCACGTCCTTGGTTGTGAGGTACATCAGATACCATCTGTATTGAATAATGATAAGTCGTTTGACCTGCATGAAATCTTCAAAACTCTACCTAGTGTTATGGTGGAGAAGAGGATGCAGATAACAAGAATAACACCAGATGAGGCAGCATCGGGAGTGGGTATTTGGTCTGTCCCTGATGATGTCTTGTATAAGGTGCTGGTTCGACTGAAACCCAGAGATTTGATTAGAGTTGCAGCTGCTTGTCATCATCTAAGGAATCTTTCTGCTTCTATCATGCCTTGCATGAAACTTAAGCTTTTTCCTCATCAAGAGGCAGCTGTTGAATGGATGCTAAGGAGGGAGCAGAACTTGCAGGTCCTAGAACATCCTCTATACAAGGGTTTGTGCACCATGGATGGTTTCCCTTATTACATAAATGTTACCTCTGGTGAAATATCCACTGGTAGTGCTCCAACTGTACATGATTTTTGTGGAGGTATGTTTTGTGATGAACCTGGGTTAGGGAAGACAGTGACTGCACTGTCTCTTATTCTGAAGACACATGGGACTCTGGCAGTCCCTCCACCAGGGATGAATGTTATGTGGTGCATGCATAAACCAGATAAAAAATATGGATACTACGAGCTTAGTGCTAGCAACTCTTCTAATGGAAACATCTTTTTGTCGGGATCAAAAAAGTTGCGAAAGGACGTGATTAGAGAAGATACATGTTCAAGTGAGTCACTGAATAATGGTGGTTCAGTTGTTAGTACAAGGTCATCAAGAAAGAGAGGCAGGTTAGTAAACCCTGATTTGAATATGATCGCTGCACATCCGAGTGGGAAGTCGCCAATGTCAGCACCAACTGGTGCTCATTCAACTCCAGCTACTCATGTGCTAAAGATTACCAAAAACTTGAAACATGTTAGGAAAAACCTCATGGAGGCATATAGCGATGGTTCAGTTGGCAATAAAAGGAAGAGAGATGCCACCTCTGAGTTAAGTGAAACCTGGGTTCAATGCGATGCTTGCAGAAAGTGGCGGAGATTATTGGACGGAACTGCACTTGATTCCAGTACAGCATGGTTTTGCAGCATGAACCCTGATTCTGCACGTCAGAAGTGCAGCATCCCAGAGGAATCTTGGGATTTAAAGCGAAAGATAACTTATTTGCCCGGATTTCACAAGAAAGGTACACCACCAGGAAACGAGCAAAATGCATCTTTTTTTACAAACATATTGAAAGAGCATGCTGCTTTGATCGATTCAGAAACCATGAAGGCTTTGTTGTGGTTGGCGAAACTTTCTCCCAAGAAACATATCGAGATGGAAGCAGTTGGTTTGACACGGCCAGTTCTAGATGCACGTGCTAACATAGGAAAGGGTGCCCGCCCGTATTACAAGATTTTTCAAGCATTTGGCCTTGTGAGGAAGGTTGAGAAAGGCATAACTCGATGGTATTATCCATCTATGCTTGATGATTTGGCATTTGATTCGGCTGCACTTGGAATTGCCCTTGAAAAGCCGCTGGATTTGGTGAGGCTTTATTTGTCTAGGGCAACCTTGATAGTGGTACCTGCTAACTTAATTGATCACTGGACAACACAGATACAGCGGCATGTTTCCTCGGACACACTTAATGTTTATGTATGGGGAGATCACAAGAAACCATCTGCTCACAACCTTGCATGGGACTATGACATTGTCATAACCACATTTAGTAGATTAAGTGCAGAATGGGGTCCAAAGAAGAGAAGTGTTTTAAAGCAGATCCATTGGTTTAGGGTAATATTAGATGAAGGACACACATTAGGTTCCAGTCTCGCCCTCACAAACAAATTGCAGATGGCTGTTTCATTGGTTGCTTCTAATAGATGGATTCTAACTGGTACCCCTACGCCAAACACACCAACTAGTCAAGTTGCTCACCTTCATCCCATGCTTAAGTTTCTTCATGAGGAAGTTTACGGTCAAAACTACCAGTCATGGGACACTGGAATTCATAGGCCTTTTGAGGCACAAATGGAAGACGGACGCAGTCGTCTCCTGCAGCTACTTCAGAGGACTATGATTAGTGCAAGGAAACAAGACCTGAAAAACATTCCTCCTTGCATAAAAAAGATAACTTTCCTGGACTTCAGTGAGGGGCATGCGAAAAGTTACAATGAACTGGCTGTTACTATCCGCAGAAATATATTGATGGCTGATTGGAATGACCCTTCTCACGTGGAATCACTTCTGAACCCCAAGCAATGGAAATTCCGTACTACAACTATTAAGAATGTGCGCTTGTCTTGTTGTGTTGCGGGGCATATCAAAGTAGCAGAGGCTGGTCAAGATATACAGGAAACAATGGATGCATTAATGCAGCTGGGCCTTGATCCTTCTTCGGGGGAGTATCAGTCCATAAGATATGCTCTTTTAAATGGTGCCAGCTGTTTCAGGTATGAAAGGTTTAAACAAAAATATATATGTAATATCCATCACTTTGATGATTTTCCTTAATAAAATTTCCTTATTGCTATATTCAGGTGCAGAGATTGGTGCCGCTTGCCTGTTGTCACGCCCTGTCGGCATCTGTTGTGCCTTGATTGTGTAGCTCTTGATAGTGAGAAATGCACGTTACCTGGCTGTGGCAACCATTATGAGATGCAGACTCCTGAAACTCGTGCACGGCCAGAAAATCCAAACCCAAAATGGCCAGTGCCCAAAGACCTAATTGAGTTGCAGCCTTCATATAAGCAGGTCAGTACTTGTGTGCTATGTTATGCTACTTCATCATTCTTTTGTTGCAGTTGAAAAGATTGTCTCTAAATACAAATTTCCCATCTTATGTAGGATGACTGGGATCCAGACTGGCAGTCGACAACAAGCAGCAAAGTTGCTTATTTGGTTAATAAGTTGAGAAGTTTGAAGGCAGAAAACATAAAACATGGGTACTCTAGGAACATGGCCAATGGTGCTTGCCTTTCTAGTCAATCTTCTTGTCAAGACCATAATAATGTGGAGGGCAGGTTACCACACACAATGCCTGACAAAGTAATAATATTCTCTCAGTTTCTGGAGCATATCCATGTGATTGAGCAGCAGGTAAATTTGAAGTGGTCATACTGCGTTTACTTAAGAATGTGAACTAGTTGGTCGCTGATCTCCTCTCTGTTCAGCTGACGATTGGGGGCATAACATATGCTGGAATGTACAGTCCCATGCCATTAGGCAGTAAGGTACGTTTTACAATTTATTCATCCTGTTCCACACTGCCCTCTGTTCCCTCTTTAAAATGAACTGCCTATTTTTGGGGAAACTATGCTAATGTGGATTTTGCCACAATTATAACGCAGAGAAGTTCACTGACGAAGTTCAAAGATGATCCAGCATGCATGGCCTTAGTCATGGATGGAACTGCAGCACTGGGCCTTGATTTGAGTTTTGTCTCTTATGTTTTTCTGATGGAACCAATATGGGATAGGAGGTAATCTTACTCTCTAATTGCTCTTCGATTGCCGAAATAACTTGTGACATCATCTCGCTATCAATGTGTGCCATTGACTCATTCACGAATGTGTTCTATTTCCCCCTTTTCATTTGATCAGTATGGAGGAGCAAGTTATTAGTCGTGCACATCGTATGGGTGCTACTCGTCCCATATTTGTTGAGACTTTGGCCATGCGTGGTACCATCGAAGAGCAAATGTTAAAACTTTTACAGGTACGTTTTGGATCACACCGTTTCGTAACATTCCACTGTGAAGTCTTACCTATTTGCTTTCTCCACCACAGGATTCCAATGCTTGCAGACAAATGGTGAATAAAGGAACAAGCAGCACTGATAATGAAGGTGCTCGGCCTCACCGGAGCCTGCATGATTTTGCGGAAAGCAGTTATCTGGCGCAACTCAGCTTTGTGAAAGGATCTGACGCGGCGGAAAAATTATAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA005181