BGIOSGA005202

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Revision as of 11:17, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA005202| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA005202, complete gene.| tag = OS01G09...")
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Gene Name

BGIOSGA005202

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA005202, complete gene.

LocusTag

OS01G0957000

Ensembl Transcript ID

BGIOSGA005202-TA

Ensembl Protein ID

BGIOSGA005202-PA

Length

5273

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:46229696..46234968

Sequence Coding Region

46229696..46229722,46229847..46229963,46231235..46231424,46231558..46231677,46231756..46232048
,46232180..46232274,46232383..46232489,46233130..46233203,46233679..46233757
,46233970..46234277,46234663..46234968

Genome Context

<gbrowseImage1> name=IndicaChromosome01:46229696..46234968 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:46229696..46234968 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGTCGCTCGACGAGCTTCCGCACAAGAAGCTGGCATCCTCGGAGGGAATTCAGTTCGCGCGGTCGGATTCCAGGTTCCGGAGCCTTAGCCCAGCGCCCATCCCAATCCCAACTGCCCCAAGCTTCAGATCATTGGTCGACCCGGTTTCTGATGAGAGAGTAAACCATGATACTGTGACCTCACATGAAAGTGAAATTGGGTCTGGGTCCATCTCCACAGTTAGCTCAACAGTTAGTTCAGTAGAATCAGAGAAAGCAGCTTATGAATTCCTTGCTCAAACTCCTATCAAGTCAACCGATGCACACCTTGTTGAGTTTTCAGAAGCTATGAGAACTGTTGCAAAAGCATTGCGACGAGTTGCAGAAGGGAAAGCTGCTGCTCAAGCTGAGGCGGAAGAGTGGAGGCGTAAATATGAATTAGAGATGGCACACAAACAGCAGAGAAAAATCAAAGGCTATGGCAGTTGTGCCAATAATGAATTAGAAAAGTTGGCCAGCCAACTAACACTGGAGACGCCTTCATCTGATCAAGCGGGATGTTGTGGAAATCATGGTATATGTTCACATGAGGTTCTTCAGGATGAAAGTCCTGGTCCTAACCCCCGATCTAGTCACAAGCTGGTGAGTAGAAAGGCATCATTTAGACTTTCATGGGGATGCAATGGGGATAAAAACGGCCAGCACAAGCATGATTTTGTATCATTTGAAAAGGGAGATATAACAACAGCAGAGCGCAGCAATAAGCAGATTTTGCTGAAATGGGAATCCTCGCCACAAACTGTTCTTTTCATAACCAAACCTAATTCTAACTCCGTGCATGTTCTTTGTGCTGAAATGGTCAGATGGCTTAAGGAACATAAAAAGATAAATGTTGTTGTAGAGCCACGTGTTAGCAAGGAACTCTTAACAGAAGATTCCTACTACAATTTCATCCAAACATGGGATGATGATGAGGAGAAAAAGATGTTGCACACGAAGGTTGATCTCATTGTAACTCTTGGCGGTGATGGGACTGTTTTATGGGCTGCGTCTTTGTTCAAAGGGCCAGTTCCTCCGGTTGTTGCTTTCTCCCTAGGATCACTGGGATTCATGACACCTTTCCCAAGTGAGCAATATCGTGATTGTCTGGACAATGTGCTGAATGGACCATTTAGCATCACATTGAGAAACCGTCTACAGTGCCATGTAATCCGTGATGCAGCAAAGGATGAACTTGAGACTGAGGAGCCAATTCTAGTGTTAAACGAAGTCACAATTGACCGTGGAATATCATCTTACCTTACCTACTTGGAATGCTACTGTGATAGTTCTTTCGTTACATGTGTACAAGGGGATGGACTGATCATATCAACAACATCTGGAAGCACGGCATATTCATTGGCAGCTGGAGGATCCATGGTTCATCCACAGGTCCCAGGAATCCTATTCACGCCGATCTGCCCGCATTCCCTGTCATTCAGGCCTTTGATACTGCCTGAATATGTGACCCTGCGCGTACAAGTGCCACATAACAGCAGGGGCCAAGCTTGGGCATCATTCGATGGCAAAGATCGGAAGCTGCTGTCACCCGGGGATGCTCTCATCTGCAGCATTTCTCCATGGCCTGTGCCCACGGCTTGCCTGGTGGATTCAACAACCGATTTCCTACGCAGCATCCACGAGGGTCTCCACTGGAACCTGAGGAAGTCCCAGTCATTCGACGGCCCGCGTGATTGA</cdnaseq>

Protein Sequence

<aaseq>MSLDELPHKKLASSEGIQFARSDSRFRSLSPAPIPIPTAPSFRSLVDPVSDERVNHDTVTSHESEIGSGSISTVSSTVSSVESEKAAYEFLAQTPIKSTDAHLVEFSEAMRTVAKALRRVAEGKAAAQAEAEEWRRKYELEMAHKQQRKIKGYGSCANNELEKLASQLTLETPSSDQAGCCGNHGICSHEVLQDESPGPNPRSSHKLVSRKASFRLSWGCNGDKNGQHKHDFVSFEKGDITTAERSNKQILLKWESSPQTVLFITKPNSNSVHVLCAEMVRWLKEHKKINVVVEPRVSKELLTEDSYYNFIQTWDDDEEKKMLHTKVDLIVTLGGDGTVLWAASLFKGPVPPVVAFSLGSLGFMTPFPSEQYRDCLDNVLNGPFSITLRNRLQCHVIRDAAKDELETEEPILVLNEVTIDRGISSYLTYLECYCDSSFVTCVQGDGLIISTTSGSTAYSLAAGGSMVHPQVPGILFTPICPHSLSFRPLILPEYVTLRVQVPHNSRGQAWASFDGKDRKLLSPGDALICSISPWPVPTACLVDSTTDFLRSIHEGLHWNLRKSQSFDGPRD</aaseq>

Gene Sequence

<dnaseqindica>1..27#152..268#1540..1729#1863..1982#2061..2353#2485..2579#2688..2794#3435..3508#3984..4062#4275..4582#4968..5273#ATGTCGCTCGACGAGCTTCCGCACAAGGTAACCGCGGGTTTTGGCAATCTGCGTGGCTGCGGCTTCGAATTGAGCATTTCGGGGAGGTGTGGTTCTGAAATCTGTTTTTGGGGTTCGCTGATGGGTGGTTTGGTTTCTCTCTGTGTGCCAGAAGCTGGCATCCTCGGAGGGAATTCAGTTCGCGCGGTCGGATTCCAGGTTCCGGAGCCTTAGCCCAGCGCCCATCCCAATCCCAACTGCCCCAAGCTTCAGATCATTGGTCGACCCGGTACGTGCGTGCTCTCGATTGGGTACTGGATTATCGCAAGGATGCGTGTCCATTTCCATCACGTCTCGTAGTCATCTTCTTTGCTATCGCTTGCTTAGCATTAGGGGAGTCTGTACTGTGTGGTATTGTCCTTAGAAGTCATGCTACTTTCACAAAAACAATATGTGTTTCACAATGTTCCATTGCTCTGCCTCATCATTGGCAAGCTTGAAGACCAGAGGTCATGAGCTCGTGTCCCCCCCATTTTTGTGGGGGAAGACTTGGCCATAGACATTCGCATTGTAAGGCACGTTGTGTTGAGTCCAACTCTGTCTTTTTTATTATTTGGGAGGGAGAGGGGGAGGGGGAGGGGAGACCACTACGGTCCTACCTTTTCGTTGATTTTTTTAAAAGCAAGTTGTGAAAATTGTACAAGATAAAAATAGAAAAAGAGGAGCACGCAGGCGCAAGGAGAGAGCTTGCGCACACAAGCACAAAACGAATTCAGATTTTCTTTTTGGGTGGTCATGTAGAGCCTCTGCACCCTTATTGTGCATTCTTCTTTATTTTGTTTTGACCCGTTTTCCTAGAATTCAATGGTTGGTTTCCAGGCATTGGGCATGAGTTCTCGTGGGAGCCATGCAAACATTGTGAGAAAATTTCCAAATAGGTCATAAAACGGATAAAAATGCTTGGGCCTAAACTCACAGTTTTTAGCAAGCCTAATCCTTTAGGAATTTCCATATTTGAAATTGGACGATTTTGGAGAGTACCATTATGTAGTCTTGTAATCCCTCCGTTTCATATCATAAGGTGCTTTGATTTTTTCCTAGTCAAACTTTGACCAAGTTTATAGAAAAAAATAGTCACATATAAAACAGCAAACTAGTTTCATTAAATCTAACATTGAATATATTTTGATAATATGTTTGTTTTGTGTTGAAAATACTACCATATTTTTCTATAAACTTGGTTAAACTTAACGAAGTTTGACTAGGAAAACAGTCAAAGCGACTTATAATATGAAATGTGGGGAGTAATTGCGTATTGGACATCAAATTTGAAGTTACTGTTACTGGATCATGTACTTGATTGTATGAGACTATGGGTCGAATTTTAATGTAATGTTCGAGTTTAAAATTTCTAGTTAGCGTCAAAATAAGCCCAACAAAGAGTTAAGGGATGGTTTATTTCTCAGGTTAAGTTTAAAGCTTAGTCCATTGCTCCATTTGAAAATCTGAAGCCAGTTGGGATAGACTATAGAGCTTATTACCAGTTCCTTTGCATTGCAGGTTTCTGATGAGAGAGTAAACCATGATACTGTGACCTCACATGAAAGTGAAATTGGGTCTGGGTCCATCTCCACAGTTAGCTCAACAGTTAGTTCAGTAGAATCAGAGAAAGCAGCTTATGAATTCCTTGCTCAAACTCCTATCAAGTCAACCGATGCACACCTTGTTGAGTTTTCAGAAGCTATGAGAAGTAAGGAGACAAAAGCTTTACATGGCACTACCAAATTCCTGATTATTTACAGTTATATATACCTTTCAGTCCTTTCACTTGCATTCAAAAAACAAAATATTGATAAATATAGTTTTTTTTTTTTAAACTGAAGCTGTTGCAAAAGCATTGCGACGAGTTGCAGAAGGGAAAGCTGCTGCTCAAGCTGAGGCGGAAGAGTGGAGGCGTAAATATGAATTAGAGATGGCACACAAACAGCAGAGAAAAATCAAAGGTTAGTTTTGTATACATTCGTAATTGCTATTCCAGGAGCTATCTCCAAAAGTCTAAATTGGAATTCTACCTTGTGCAGGCTATGGCAGTTGTGCCAATAATGAATTAGAAAAGTTGGCCAGCCAACTAACACTGGAGACGCCTTCATCTGATCAAGCGGGATGTTGTGGAAATCATGGTATATGTTCACATGAGGTTCTTCAGGATGAAAGTCCTGGTCCTAACCCCCGATCTAGTCACAAGCTGGTGAGTAGAAAGGCATCATTTAGACTTTCATGGGGATGCAATGGGGATAAAAACGGCCAGCACAAGCATGATTTTGTATCATTTGAAAAGGGAGATATAACAACAGCAGAGCGCAGCAATAAGCAGGTTAGTCCTCCTGTGCTGGAACAGTCAAGAATATTATTCTAATTATTTCACTCCAGTAGCTGGAATAACTAGACCAATGAATCGTCTCTTATGCACATCTATTTCTGTTACAACGATTTTTTTTATTTCAGATTTTGCTGAAATGGGAATCCTCGCCACAAACTGTTCTTTTCATAACCAAACCTAATTCTAACTCCGTGCATGTTCTTTGTGCTGAAATGGTCAGGTGTGTTCTTTGATTTTTATATTTTAAATGCCCTAAATATCTGACAGATGCATGCACGTTTTAAGTATTGTGTTTGCACTGCTAAATGTACTATTTATTTTTCTGCAGATGGCTTAAGGAACATAAAAAGATAAATGTTGTTGTAGAGCCACGTGTTAGCAAGGAACTCTTAACAGAAGATTCCTACTACAATTTCATCCAAACATGGGATGATGGTAAGGCATTTCTATTGATTTAATACATTAGTTTCATGCTGATTCATATTTTTTCTTTTGAAATACTTCATATGCTTAAGAGAGAAAAAAATGGTGTTTCAGTTATGAACCCTTTCCTTGTCATTGATATTCTGAAAAATGAAAGAACTTTCATGAGAACTAAATTAGTTGATTACTGCCGAAATGGCATGGGTATATAGTACGGGCATGCTTTTGCTTTACTTTATCACCCTTATGTATCCTATCTTGTTTTACATGGGGGCAAAATTTACAATGAGAACTGAATTAGTTGATTACTGCTTGAATTCGAGATGTTTATTACCTATGTCTAGATTTTTATGAAATCATCCAATCACATCTCAATAAAGATTTCGGTAAAAATCCCCTTCTACTGCTTGAATTTGTGATGTTTATTACCTCTGTCTGGAATTTTCTGAAATATTCCAATCACATCCCAATAAAGTAATATCCTTGTACTAGATGTCGGTACAAATCATTCTTGGCATTGAATTGGATACACATTATAAAGTTGTATTTTGTATCAAATGGGAAGATTAGACATCTTGTTTGAGTAAAGTAGTTCTATTCATTCACCTAGCACTCTCCCTTATCTGTGCAACTAATTAGATAATTCTGATAGATGAGGAGAAAAAGATGTTGCACACGAAGGTTGATCTCATTGTAACTCTTGGCGGTGATGGGACTGTTTTATGGGTAAGTAAATTCAATTCTTTGTCTAGAGTTCTGCCTCAACCACTGTATCTTTTGATCGAATCAGACCAACTAGAGGATTAACCTTTTTTTTTTTTTTCCAAAGGTCCATATATTTAGTCAATAATCAATATTGCTTAGTTTAATGGCATATGTGGGGTAGAATTGGCTGACAGCTGAAATGGAAGGTCTGTCGGTGCCTGCAGCATAAGTTATCATGAGAATTGCTTCTTCACAGTTAGGCAGAGTTCTTTTCTGATTCTGACCTATCAAAATCAAAAGTTGGAAGGTTCTAGTACAAATTAGCTATCAAAACCAACTTACCTGATATTTATTGCTTTGTTCTTCCATATTTAGGCGACTGATTCTTCCTGCATTTGAAACTATAATTGCTTCTCAATTTGTACTAGTTACTAGTTTTTGTACATTGCTCTGCTGGGCTGACATTTAAATACATGGTGAATCAATCTCTTAACAGGCTGCGTCTTTGTTCAAAGGGCCAGTTCCTCCGGTTGTTGCTTTCTCCCTAGGATCACTGGGATTCATGACACCTTTCCGTATCCTTTTATTATGGATGTTGACTGCTTTCTCGATATCGTTTTGTGTAGTGACTGGTTCTTACTGTTTTGCTATCCAATCTACATTTTTAGTAAGTTTGGATTTGGTCTAAAAGAAACCTGCTTGTTAGACGATAAATCTCACATGAAGCTCCCTGCTCTCCTGTTAACATTTGTGTTATCCATGTTGTCCTCCTTAACATGCTTTTCAGCAAGTGAGCAATATCGTGATTGTCTGGACAATGTGCTGAATGGACCATTTAGCATCACATTGAGAAACCGTCTACAGTGCCATGTAATCCGTGATGCAGCAAAGGATGAACTTGAGACTGAGGAGCCAATTCTAGTGTTAAACGAAGTCACAATTGACCGTGGAATATCATCTTACCTTACCTACTTGGAATGCTACTGTGATAGTTCTTTCGTTACATGTGTACAAGGGGATGGACTGATCATATCAACAACATCTGGAAGCACGGCATATTCATTGGCAGCTGGAGGATCCATGGTTCATCCACAGGTATGCCCTACATCGCATGATACATCCTTAGCACTTGAGTATTTACTGATTAATTTTATTGGATTATCTTCTTGGGCATTTCCTAATCACACCCCCTTAGATTTCTGCAATAAATCGTGAAGCTTTTTTCCCCTTGGTTCTAAAATTGTGTAATGTGGTTCAGAAGTTTAGATAAGTTGCACTGAACACCAGAATCTGATCTGTTTCACAAACATAGGTTACCCTGTACTACCTGTAATTCTTGTAGCAAATTAGCAATGTCTATAAATTAACCTTTTGAGGCCTAGTTACAATCATGAAATGTTGCTATTTCCTTTGTCCAGCTGCTCAACATAACTTGTCGACTCTATTTTGGTGGTCTCAAATGTTGTGCTGGTATATGCAGGTCCCAGGAATCCTATTCACGCCGATCTGCCCGCATTCCCTGTCATTCAGGCCTTTGATACTGCCTGAATATGTGACCCTGCGCGTACAAGTGCCACATAACAGCAGGGGCCAAGCTTGGGCATCATTCGATGGCAAAGATCGGAAGCTGCTGTCACCCGGGGATGCTCTCATCTGCAGCATTTCTCCATGGCCTGTGCCCACGGCTTGCCTGGTGGATTCAACAACCGATTTCCTACGCAGCATCCACGAGGGTCTCCACTGGAACCTGAGGAAGTCCCAGTCATTCGACGGCCCGCGTGATTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA005202

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA005202&oldid=42926"