BGIOSGA005225

From RiceWiki
Revision as of 11:18, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA005225| Description = BGIOSGA005225| Definition = Oryza sativa Indica Group BGIOSGA005225, complete gene.| tag = | tid = BGIOSGA005225-TA|...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA005225

Description

BGIOSGA005225

Definition

Oryza sativa Indica Group BGIOSGA005225, complete gene.

LocusTag

'

Ensembl Transcript ID

BGIOSGA005225-TA

Ensembl Protein ID

BGIOSGA005225-PA

Length

2870

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:46453184..46456053

Sequence Coding Region

46453184..46453326,46453463..46453635,46454013..46454135,46454473..46454643,46454761..46454839
,46455170..46455236,46455690..46455782,46455880..46456053

Genome Context

<gbrowseImage1> name=IndicaChromosome01:46453184..46456053 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:46453184..46456053 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCCGCCGCCGCCGCCTCCCAGCCTCGCAGCCACCAGCCCACCTCGCTCCGCCGCGCGCCGCCACCTTCTTCGGCCGCGGCCAAGCCAGAGCCCAATGAGAAGGCCTCCAACTCCAAGCCCGCCTCGCCCGTCCAGGCACCGTCGCCGGAGAGGACGGTGAAGAAGCTGAGGTTGTCCAAGGCGCTCACGCTTCNCGGAGGCCACNCTCGGTGTCGGACGGCGTGCCGGAGTGATGGCGCTCAAGCGATGTGGATGCCGCTGTTGCTCACTGTATTCCAGACGGGATGCTCTCCNGGCATACTCACAGCAGCAGGACGGGTGATAGCAGAGGGACTCAGGCCTGACGAAACAAATGTGGCCAAAGCGATGACGCGTAACCCAGTTTTTGTTATGTCCAACTCACCAGCCATTGAAGCATTACAAAAGATGGTCAAAGGAAAGTTCAGACATCTTCCTGTAGTGGAACACGGTGAGGTAATTGCCATGCTGGACATTACCAAGTTCCTTTATGATGCAATTTCAAGAATGGAAAAGGCTGCAGAACAAGGCAGTGCAATAGCAGCTGCTATGGAAGGAGTTGAACGACAGTGGGGAAATGACTTTCCAGGTCCACATTCATTTATCGAAAATCTGCGAGACCAGCTGTTCAAGCCTTCCTTATCAACCATCATAACAGAAAATAACAGTTCCAAGGATTTGGTATTGCGATTAGTGGCCCAAAGTTTATCCCCAGATGTGACTCTTGTAGAAAAGCAGTATGATGACGATGAAGGTGACAGGGTGGTTCTGACCACCGACGGTGACCTCAGTGCGGCAATTCAGCATGCGAGATCAGCTGGATGGAAGGTTCTGAGGCTGCATATGGATGAGCCCTGGAGCAATGGGGAGCACACCACATCGCTTGTAAATACTTCACCGGTGAAAACAGGGCGGTCATTTCTCCGGCTAGGCATCGCAGCTGGTGCAGTTGCGGTTGCCAGCATGGGGGTAATCTTCTACTTGAAACGTTCTGAACTATAA</cdnaseq>

Protein Sequence

<aaseq>MAAAAASQPRSHQPTSLRRAPPPSSAAAKPEPNEKASNSKPASPVQAPSPERTVKKLRLSKALTLXGGHXRCRTACRSDGAQAMWMPLLLTVFQTGCSPGILTAAGRVIAEGLRPDETNVAKAMTRNPVFVMSNSPAIEALQKMVKGKFRHLPVVEHGEVIAMLDITKFLYDAISRMEKAAEQGSAIAAAMEGVERQWGNDFPGPHSFIENLRDQLFKPSLSTIITENNSSKDLVLRLVAQSLSPDVTLVEKQYDDDEGDRVVLTTDGDLSAAIQHARSAGWKVLRLHMDEPWSNGEHTTSLVNTSPVKTGRSFLRLGIAAGAVAVASMGVIFYLKRSEL</aaseq>

Gene Sequence

<dnaseqindica>1..143#280..452#830..952#1290..1460#1578..1656#1987..2053#2507..2599#2697..2870#ATGGCCGCCGCCGCCGCCTCCCAGCCTCGCAGCCACCAGCCCACCTCGCTCCGCCGCGCGCCGCCACCTTCTTCGGCCGCGGCCAAGCCAGAGCCCAATGAGAAGGCCTCCAACTCCAAGCCCGCCTCGCCCGTCCAGGCACCGTAAGCGCCGCCGCCCCTCCCCTCGCGATCGCGATGGCTTCCGCCGCAAGGAAGGGCGTTCCTGGCTCCTACCTACCTTCGCCCCGTGCTGATTCATTTGGAGCTTGCGTTTTTGTGCTTGTAATTTGGCGCGCAGGTCGCCGGAGAGGACGGTGAAGAAGCTGAGGTTGTCCAAGGCGCTCACGCTTCNCGGAGGCCACNCTCGGTGTCGGACGGCGTGCCGGAGTGATGGCGCTCAAGCGATGTGGATGCCGCTGTTGCTCACTGTATTCCAGACGGGATGCTCTCCNGGCATACTCACAGCAGCAGGTCTGAATCACTTATTTGCCTGCCTTGTCGTCGTGAACTGATCAATGCCAAATGCAATTTATTTTGTGTTCAATCAGTTTTGAGTTACAGAGAAATTCATCAGTCATTCAGATTTAGCGGTGACGATTATGCAACCTGAGCTTGATTGGGTACTGTAGCTCATTGTCATGTCACATGAGACAAATTAGATTTTATTTTCAGGGATATTGGGCTTTAAGACTTGATAACATAAAACGGATAAGTTTTGAAGGTTTTACTGTAGAACAAGATGTGCTTAACATTTTAATGCTGTTAATGATGACGATTTAATGCTGTTAATGATGACGATCAAGTTTACGGAAGGATTTTTTGTATTTTTGTTTTGTAGGACATATCAGGACGGGTGATAGCAGAGGGACTCAGGCCTGACGAAACAAATGTGGCCAAAGCGATGACGCGTAACCCAGTTTTTGTTATGTCCAACTCACCAGCCATTGAAGCATTACAAAAGATGGTCAAAGGTATTGATACCATTTTTGCTTCTCAACATCATCATTTGTTCTTCGCTTTACTGTTGTTTATGGAGTATAATTTACTTTTTTCTTATCAAATACGGCCTATGAACCATGTTGAAACTCAGGCACTCAGCAGCTATATAGGCTAAGGGATCATATGTCTGATAAAAATGTTTCTTGCAAAATTACAAATGTTAGGCTCTTTTGGGAGAAAGTAAGATTCTTTTTTTCCTGATAATTGCAAAGTTAGATAGATTCTTTCTTATGTTCTTCTGAGTGAATTATTTTCCTTTTCTTTTTGGGTCTGAATGCTCTCTTGTGGCAACATGGCATTCATTAACAGGAAAGTTCAGACATCTTCCTGTAGTGGAACACGGTGAGGTAATTGCCATGCTGGACATTACCAAGTTCCTTTATGATGCAATTTCAAGAATGGAAAAGGCTGCAGAACAAGGCAGTGCAATAGCAGCTGCTATGGAAGGAGTTGAACGACAGTGGGGAAATGACTTTCCAGGTTAATTTGTTTTAGTTTTATTTGAATATGGTATTATCTATTTTCTACATAACAATCATGGTGCATTCCACTCAATTTTCTTTTGATTAAACGATGTTACACTTTGGGCTACTTCAGGTCCACATTCATTTATCGAAAATCTGCGAGACCAGCTGTTCAAGCCTTCCTTATCAACCATCATAACAGAAAATAACAGGTACTAGTTCTATATTCCCAGGAAGACTTATGTTTTGAACTATTTCTCATTGAATTTTCACACCGCTCTTTTTTCTAGTGTTCCAGTAGTATCTCCTTCAGATCCTGTAATAGCAGCTGCCAAAAAAATGAGAGAATACCGAGTCAACTCAGTGGTTGTCATGACAGGGAACATGTTGCTAGGAATTCTTACGTATGTTTTTCTTTACATAAAACTTCTTTTTCTTAACACAGTTATCTGCTCAATGGTAACACTAGGATAGTGTAGACTGCTTTCTATGATATAATTCTATTTAAGTGATTAATGGAATCTGTGCTGGATATACTGTAGTTCCAAGGATTTGGTATTGCGATTAGTGGCCCAAAGTTTATCCCCAGATGTGACTCTTGTAGAAAAGGTACCTTTACAAAGTTGAAACCTCTGCATTTTAAATCATGTTGCTTTCATGTCTTATTTTTATTATTTTCACAATTTGATTCAATATGCTGGTACATTTCTGAAGGTTATGACTACAAACCCTGATTGTGCGACATTGGATACATCGATCCTTGAGGCCCTGCATTCAATGCAAGACGGGAAATATCTGCATATTCCTGTTGCCGACAAAAGCAAGTACCGAATTCTAACAACAGGGAAATCTTTTTTCGATGTGCATATCTAACTTAACTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCAACTTTTCCATCACATCAAAACTTTTCTACATACATAAGCTTTCAACATTTTTCTTCAAACTTTCAATTTTAGTCAAACTTACAATTTTGACGTGGAACTAAACACACCCTTACTTGAATCGCATTGAGCAGTATGATGACGATGAAGGTGACAGGGTGGTTCTGACCACCGACGGTGACCTCAGTGCGGCAATTCAGCATGCGAGATCAGCTGGATGGAAGGTCACAACTGAGCATTCCTTTATTAGTTTGTTACTGTTCTTGCAGCCTCCTAGCTGCGGCATTCCGCTAATTTTTGGAGGTTGTTTTTCCTGTTCAGGTTCTGAGGCTGCATATGGATGAGCCCTGGAGCAATGGGGAGCACACCACATCGCTTGTAAATACTTCACCGGTGAAAACAGGGCGGTCATTTCTCCGGCTAGGCATCGCAGCTGGTGCAGTTGCGGTTGCCAGCATGGGGGTAATCTTCTACTTGAAACGTTCTGAACTATAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA005225

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA005225&oldid=42949"