Os11g0545700

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Revision as of 09:13, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os11g0545700| Description = Similar to Centromere/kinetochore protein zw10 homolog| Version = NM_001074592.1 GI:115485832 GeneID:4350690| Length...")
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Gene Name

Os11g0545700

Description

Similar to Centromere/kinetochore protein zw10 homolog

Version

NM_001074592.1 GI:115485832 GeneID:4350690

Length

3797 bp

Definition

Oryza sativa Japonica Group Os11g0545700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 11

Location

Chromosome 11:21978291..21982087

Sequence Coding Region

21978426..21978509,21978670..21978752,21978848..21978989,21979061..21979219,21979520..21979597
,21979725..21979853,21980339..21980434,21981767..21981864,21982036..21982078

Expression

GEO Profiles:Os11g0545700

Genome Context

<gbrowseImage1> name=NC_008404:21978291..21982087 source=RiceChromosome11 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008404:21978291..21982087 source=RiceChromosome11 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atcagcacttcaattaatgaaacttgttcatggagccctgaagtgcaggatgcttgtttgtcatccgcaagagttgcaaaggagttatgctatgctgctagggacgccttactcttgtacaaggctattgtgccagttcagctagagaagcaactcgatagtatcaatcaagtagctgccattattcacaacgacttctaccatttgtcccaagaaattcttggtcttgcatttgagtaccgtgcagattttcctggtgacctacagaaactagttgtttttgtggatttagccccaaccttctctcagatggcagatggtgtacttacaaggcaaatccagcttgttactgcaaacttaatagaggctatagatggcgctgatggttttcagaatacacaccaacctcagcattatgaatcagcaaaattcagtattgagcaggttgtgttcattttagaaaaaatacacattatgtgggaatcgatactgccaagatcaatttacaagagaagtatgtgttacatccttggatctgtcttttctagaattacaaaagatatgctcctaatagatgacatggcagcagaggagacattacagctgcaaggtcttatccatttggctcttgaaaacctctcatcactatttctgtccctggttgagaatgagttcttggaccatcaaacttggatcgagttggatgagattatacgacctttgaagaagttccggaagctagcggagctgcttgatatgtcgttgaaatccatcacggccgcttgggaaagtggggagttaactaattgtggtttcacatcgtctgaggtacaaaattttgtcaaagcaatatttgcggattctcctcttaggaaggagtgcctattatggatttctaggacaccatcttag</cdnaseq>

Protein Sequence

<aaseq>ISTSINETCSWSPEVQDACLSSARVAKELCYAARDALLLYKAIV PVQLEKQLDSINQVAAIIHNDFYHLSQEILGLAFEYRADFPGDLQKLVVFVDLAPTFS QMADGVLTRQIQLVTANLIEAIDGADGFQNTHQPQHYESAKFSIEQVVFILEKIHIMW ESILPRSIYKRSMCYILGSVFSRITKDMLLIDDMAAEETLQLQGLIHLALENLSSLFL SLVENEFLDHQTWIELDEIIRPLKKFRKLAELLDMSLKSITAAWESGELTNCGFTSSE VQNFVKAIFADSPLRKECLLWISRTPS</aaseq>

Gene Sequence

<dnaseqindica>3579..3662#3336..3418#3099..3240#2869..3027#2491..2568#2235..2363#1654..1749#224..321#10..52#tatatctaaatcagcacttcaattaatgaaacttgttcatggagccctgaaggtatacctggacccacattctttctgctgtttatatatattatctagagtacttgtactaatttgacatggtttgttattccttatcacatttctgtgcaaatgctgttggctattgtaaacaaaaaagtctggatttgatatacatccatttttgctgttgaataaccagtgcaggatgcttgtttgtcatccgcaagagttgcaaaggagttatgctatgctgctagggacgccttactcttgtacaaggctattgtgccagttcaggtttgtacatatgcaaatcaaccaaagctccagagatgataacatctgctgttcaatcatatggattggcttttagctgtaccatttaggataatccacagagaaatatcaattgatgtccattatatttggagtgttaattaatgactattatttattcttgtttgcaagtatggtgctgccttcaggtgtacatgtgattgtttgttttgctctttttgtttttgcatgttgctgatataagaatgtctattagcaaggatctatatgcttttatatcactattagcttttggagaaaggaaaacttagtagaataagattcaatttaatatgcatggcttgatgatttccctcagtgtgtattctactttaactaaaactacaccctaatagatgtaaatgtagaggaaataattcttagttttagctacagtaaaacaccctttgtagtcacatggtcatggcatgcttagtttaagcaagtgtttcatgtagctaatgtgcctcctatttggtgcatccctatggtttaataacgcacagtaaaactgttttttagggcaacacagtaaaactgttcaaacaatttaattgctggcttgctgctttgtgttatggggaaacctccctttagtagatcataccatattctattcttcagttggcaaggccctagacagggaaccctaagtcctaaccgacagcagggggtgggagagtagaaaaggtacatgagataatagtgttgctgtgttggtcctcacatcgcaagtctgtctaacaaactcttaagttgagaatgaaacaaatggactgaagataaacctaagcaaaatataaggagctggctgacttatctgtcatgccgcagctcctggtggtggtatgtgtggctatttggtgcatcccagacattacactaattctatgttacaggcgctatttttttttcttgaatacacaagagagttgcgtatcatttcataagagtgcaagagaacacggggagggaagcagaagcaatccctcaccctacagacatacaggacttaagtttacatgaaaccacaaaacaatgacctcacccaagtggggatagcgacctactgaggaactccctaagcaaagaagctcccatacaccaaaggccacactcattagccaccataatgacagtcattacattaggaccgacgccgttaaacacagtcatttctatgattccatatttcccaagccaccaagagttacaggtgctattactgagccatgatacaaactaattgaactttggcactcacctcttcttttttttttgggtcttctgcagctagagaagcaactcgatagtatcaatcaagtagctgccattattcacaacgacttctaccatttgtcccaagaaattcttggtcttgcatttgaggtttgtggatcctactctttgctgtttgttatagtgattgatcctgatgtgttgattttcgtgagtatactttctgcagtccttcatactggaatatagacttgccatatggactatgtattgtctccatcctttattcttatgttttatgacctctcttcgctcttacgatgttctttaattgtcagtttcagtggaaagcagattgatttttttttctttgctaaatcactatctgcatgctgtccagcctaccttctcctgttgttggtttgaactagcattctataatcatgggattaagtgtttttacatcatagattggtaactgtataattctgcctatcataacatttatggacctctgtttttcccttgggcaagtgcaacctcactgtattattttcctgttgaacttaaagattccttcttttcttttaaattgtgttacgtttttactgacctttcttgatgcttttctccagtaccgtgcagattttcctggtgacctacagaaactagttgtttttgtggatttagccccaaccttctctcagatggcagatggtgtacttacaaggcaaatccagcttgttactgcaaacttaatagaggtattttgttatctatttgtttttggaagtaggcaaatgttgaaatctgaagtctggggaaaatactaaacatcaaaaatggtttgaggacacatttggagctcctaatttgttaaattacattcaggctatagatggcgctgatggttttcagaatacacaccaacctcagcattatgaatcagcaaaattcagtattgagcaggtatgtttcattgcaaagatgtcagttacttggaccttgtagaaatagtagtgaataacctagaccggttactgtacttttggagtggtcaacagtagaatagaatttgttcttaacatcttatccatgtcctgcaatggaatcacaattatcttctttatctagcgcaaaatcatcaatcacaaccaattcaatctgtcaactaaatgtcttgatttttcttcaaatttgagttacaaaatataggtcatacttctgcacattgatgcattattatggtatatattgacttccattcaggttgtgttcattttagaaaaaatacacattatgtgggaatcgatactgccaagatcaatttacaagagaagtatgtgttacatccttggatctgtcttttctagaattacaaaagatatgctcctaatagatgacatggcagcagaggagacattacaggtgagacatattatccttggaaggtttgagctcatcattcttgatatttattatatgtgatatgcggacagctgcaaggtcttatccatttggctcttgaaaacctctcatcactatttctgtccctggttgagaatgagttcttggaccatcaaacttggatcgagttggatgagattatacgacctttgaagaagttccggaagctagcgggtatatttcaccttgctatgattttcatagtatatgtttaatgtttttttaattcccctcaagaaaatactaaagtgatctacaatattactcagagctgcttgatatgtcgttgaaatccatcacggccgcttgggaaagtggggagttaactaattgtggtttcacatcgtctgaggtgagcgagtagatttttgggctacctttggagtcacgagttttctttgatagtcctagaaatctgtttactatcatgtttgttttattttgatacttcagttttctaaaactgaaaatataattaggctaaatttaacaaatctgcttactttgtgcaggtacaaaattttgtcaaagcaatatttgcggattctcctcttaggaaggagtgcctattatggatttctaggacaccatcttaggatgcagaaatcaaactatttgttcttcactgattcattaggcatcttgtcattgcccttcgtttgtacagatctggttatgttgtgctttgcatttactttcatggatagtatggactatgggggtttcactcg</dnaseqindica>

External Link(s)

NCBI Gene:Os11g0545700, RefSeq:Os11g0545700