BGIOSGA005240

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Revision as of 11:18, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA005240| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA005240, complete gene.| tag = OsI_053...")
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Gene Name

BGIOSGA005240

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA005240, complete gene.

LocusTag

OsI_05332

Ensembl Transcript ID

BGIOSGA005240-TA

Ensembl Protein ID

BGIOSGA005240-PA

Length

3843

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:46615237..46619079

Sequence Coding Region

46615237..46615448,46616519..46616554,46616656..46616800,46616889..46616942,46617173..46617264
,46617834..46618060,46618673..46618849,46618931..46619079

Genome Context

<gbrowseImage1> name=IndicaChromosome01:46615237..46619079 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:46615237..46619079 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCCGCCGCCGCCGCCGCCGCCGTCGCCTGCGGCATGTCTACGTCCTTCCTCATCCGCCTCTCGCCTTCGCCGCCGGCGTCTTCCCACGTGCCTCTCCCTCGGTCTCCGGCTTCGTCGGCGCGCCCGCGGCAAGCGTCTTCCGTCTCCCTCTCCACCGCGCCTAGGCCGAGGGCACGCGCCGCCGGCTCCGACTCTCCCTCCAACTTTGGCTTGCCATCAAAATCTGAGGTCAATTCTGTAACAATAGGTCAAACATCACTGATGCCACCATTCAGCCTTATGCTTGATGAAGGCTCTAGATCTAAAAAGCCATATAGATGGCAAAGGGTGTTGCTTAAAGTAAGTGGGGAGGCTCTTGCTGGAGATCACACAGAAAATATTGATCCAAAGATCACGATGGCAATTGCAAGAGAGGTTGCTTCTGTCACCAGACTAGGTGTAGAGGTTGCTATTGTTGTTGGTGGCGGCAATATCTTCCGCGGGGCCTCTTGGGCTGGATGTAGTGGACTCGACCGCTCATCAGCAGATTACATTGGCATGTTGGCTACTGTGATGAATGCCATATTTCTTCAAGCAACAATGGAGAGCATTGGAATACCAACCCGTGTCCAAACTGCATTTCGTATGTCAGAAGTTGCAGAACCATACATACGCCGAAGAGCTGTCAGGCATTTAGAGAAAGGAAGAGTTGTTATATTTGCTGCTGGTACAGGGAACCCATTCTTTACAACTGATACAGCTGCTGCTCTTCGTTGTGCAGAAATCAATGCAGAGGTAGTACTTAAGGCAACAAATGTTGACGGTGTGTACGACGCAGACCCCAAGCGTAACCCAAATGCCCGCCTTCTTGAGGCTGTGAGCTACCATGAGGTGCAAACAAGAGACCTCTCAGTAATGGACATGACTGCCATTACGCTATGCCAAGAAAACAACATTCCTGTTGTCGTGTTTAATTTGCAAAAACCTGGAAATATTGCGAAAGCTATTGTTGGTGAGAAGGTTGGCACGTTTATAGGCTGCACAAAAGATCAGGACCAGATTGTGGGGAATGCACTGGATCAAGAAAGAAGATTGGTGAACGAGTTATGA</cdnaseq>

Protein Sequence

<aaseq>MAAAAAAAVACGMSTSFLIRLSPSPPASSHVPLPRSPASSARPRQASSVSLSTAPRPRARAAGSDSPSNFGLPSKSEVNSVTIGQTSLMPPFSLMLDEGSRSKKPYRWQRVLLKVSGEALAGDHTENIDPKITMAIAREVASVTRLGVEVAIVVGGGNIFRGASWAGCSGLDRSSADYIGMLATVMNAIFLQATMESIGIPTRVQTAFRMSEVAEPYIRRRAVRHLEKGRVVIFAAGTGNPFFTTDTAAALRCAEINAEVVLKATNVDGVYDADPKRNPNARLLEAVSYHEVQTRDLSVMDMTAITLCQENNIPVVVFNLQKPGNIAKAIVGEKVGTFIGCTKDQDQIVGNALDQERRLVNEL</aaseq>

Gene Sequence

<dnaseqindica>1..212#1283..1318#1420..1564#1653..1706#1937..2028#2598..2824#3437..3613#3695..3843#ATGGCCGCCGCCGCCGCCGCCGCCGTCGCCTGCGGCATGTCTACGTCCTTCCTCATCCGCCTCTCGCCTTCGCCGCCGGCGTCTTCCCACGTGCCTCTCCCTCGGTCTCCGGCTTCGTCGGCGCGCCCGCGGCAAGCGTCTTCCGTCTCCCTCTCCACCGCGCCTAGGCCGAGGGCACGCGCCGCCGGCTCCGACTCTCCCTCCAACTTTGGGTACGTGATTCTGCACTCGGTTGGCTCCACGGGGTGTTGTTCTTCGTGGCTGCGGTTGACGTGATGTTTTGTGGTCTCCCCCATTGTGTTTGTGCCAATGCGTGGTAACAATGGCGGAGAACTCGTATGGCTGCGAGTACCCCCCAGCTTTTGGCCGGCCGCCATCGCCCTGAGACATGGTCAGCGCGTGCGAGATGCGAGAGATGAGAAGGAGCAGTGTCGACCACCCGAGTCTTAGCCGAGCGGAGGCCGGAGGCCTGAAGCTTTGGGCGGCGAGTTGGCCACCGAGGTTCGTGGCGGTGTGTGCGGCGGCCGTACGGGGTGGCACACCGGCGTGTGGAGGGGAGCGAAATACTGTAAGAAATAGAGGACGAGGCATTTCCCCAAATATTGCGGTATTTGCTAGATTAGTGTCTTGGAGTTGGATGCTAAATTTTGGGTAGGATATGTTCAGATATGTCAGAGAAATTACAATAGCGCTCTAGCAGAATCTGTAGACTAGTAGCATGATTCCCCTTTTACAGTATCACTATGGAATGGAAGAATTTTCTGTTAAAATTTTACTTCTAAAATCTCAATCCAAGAAATTTACATAGGAATTAGTCTTCAGTCTTTTCTTAGTGTAGTTCCTATTGATGTCCTATTACTTTGTGATTTTTTTTCCTGCGCTGCGCGTTTAATGTTCAATAAAATGAATTTTAATCTATTGCCGATGCAATCTTGAATGGCGTTGGCACTCACCGCACCTCATTTTCCATACATCCTCTGCCAGCGACGACGCCGTGCCACACATCACAAGGATTAGAGATTGTAATAGATAGTAAGGGTGTCACTACTGAGTTAACAAGGATGAACTAGTGGCTATTTAGCTGTTAAGTGGCCCAACTAAGACAAAGACACTATCATCTCTGAAAAAAGCGGTGTATTATATATGAGCACCTTTAAATACTATTGTGATGTCTTCAAGTCAAACTTAAATTATTTGTGTGCGCAATACATCTGCATGGTTCATGTTCACAAATACTAAACTATGACTGTGACTTTTCCTTATATTCTGTTGGAATTGGCAGCTTGCCATCAAAATCTGAGGTCAATTCTGTAACAATGTATGTTCTTTCAAATTCTGTAGTAGTTTCTTTCTGATGTTGAATACAGTCTAATTATGGAGTGAGTTATTCCTGATAATGCATCTCCTTTTATTTGACAGAGGTCAAACATCACTGATGCCACCATTCAGCCTTATGCTTGATGAAGGCTCTAGATCTAAAAAGCCATATAGATGGCAAAGGGTGTTGCTTAAAGTAAGTGGGGAGGCTCTTGCTGGAGATCACACAGAAAATATTGATCCAAAGGTGAGGTTGCTTTTAGTGGAGCATTATCAAATTTAAAATACTGAATATTTGATGGAACAGGTCATGTAAGTGTGTAATGTTGTTGCAGATCACGATGGCAATTGCAAGAGAGGTTGCTTCTGTCACCAGACTAGGTGTAGAGGTGTGCCAGTGCCTTTCATTCTTTTATTGCTTATTTACCCGATTAACTGTTTGAAGATTGAAATTAAATCAAGTGAAACATAATTAGGCATGTACATAGTAGACATTTAAAGTTCAACAACTAAACCGCCCTGTGTTCCAACGAAGTGGTATTATGCTATGTGTATGTTCCTCTTGTCTTCTCTATTGTAGAAACATATGCTGTACATTAAAGATCGGGAACCCTTGCAGGTTGCTATTGTTGTTGGTGGCGGCAATATCTTCCGCGGGGCCTCTTGGGCTGGATGTAGTGGACTCGACCGCTCATCAGCAGATTACATTGGGTATGATGTTCAGTTTTCTAATGTCTTTCATAATTGAACCATCGTAACATCCTGTGGTTGGCAATCGAGAATGCATTAAATGAAGTGGAAGCGCCATGAGGGTTAACCTAATAATGACACAAGAACACCCAACTCGGCATGCCTTAGTAGTTGCATGCAACCATGCAAATATGCTAATTTATGTAATCCATGCTAACTTTTTTTTTTGGCTATTTAAACATCTATAATACCACGCCTGATTGTGCCTATCGGCCCATCACGTAGAACACATCTAAATTTCATAGAACAAAATTCCATAACAAATTTCCAAGCAGAATAGTGTACTGAGTGTAAACTTATAGTTCGATTTTACAAACCATACAATCAATAAGTATATACTGTTCTCTGTAAGTGCAAACTTACATGTAAGTATTTAACATATGGTCTATATCCTTTGCCCATAACGTTTTTAAAAATGTTTTTTAGGTTTTGTTTTAAAAAAAAGAAGACATCATTCCTGTTATAAGTGATTTCATAATTTCTCAGCATAAAATAGTTCACCACTTTATCTTACTCTTTTCCTAATTCAGCATGTTGGCTACTGTGATGAATGCCATATTTCTTCAAGCAACAATGGAGAGCATTGGAATACCAACCCGTGTCCAAACTGCATTTCGTATGTCAGAAGTTGCAGAACCATACATACGCCGAAGAGCTGTCAGGCATTTAGAGAAAGGAAGAGTTGTTATATTTGCTGCTGGTACAGGGAACCCATTCTTTACAACTGATACAGCTGCTGCTCTTCGTTGTGCAGAAAGTGAGTTTATCCTCCGTTTCTCACTAATGAACTGGTGTAATTGTAATCATAAAATCTCAACAAAAGTAGTATTGGAGATACGTGAATACTTTTATATTTTAAAGCCAGTGCTTATAAGCTGCAATTTCATGTCGTATATTTAACAATATATAGTACTGCAAAACATTCAAGGTACTTTTGCGAGTTTGCCATTTATGTTAGTCATCATGCCCCTGTCAGTTGCTGGTAATAGAACTAGAGTTCTACCCACAATAGCTCGTAATGTTAGTAGCCTCACCTCTGAGTTTATCCCATGAATTCATGAAGACCCTTGTGCGCCCTAAATGGTTAAGCTAGACAGTTAGGCTAGACAAGGATCGATCATTTATTTTCAACCTTGCTTCCCAGAAACTAGAGACATGATGCAGAGATTGTTATACATGCCATGTTAGGGTGTGTTTAACTATTCTATTTCACAAGAAATCATTAGTCACAGTTTCCATTATGCATGTAGAATCATTTTATCATGAATTGAGTTTGAACTTGTCTTTCTATAATGATTTCTCAAATAAACATCATTGTCTCATTTTGTTTATTCCATCTTACAATGGCTTTTTTTCTTTCATTTTGCAGTCAATGCAGAGGTAGTACTTAAGGCAACAAATGTTGACGGTGTGTACGACGCAGACCCCAAGCGTAACCCAAATGCCCGCCTTCTTGAGGCTGTGAGCTACCATGAGGTGCAAACAAGAGACCTCTCAGTAATGGACATGACTGCCATTACGCTATGCCAAGAAAACAACATTCCTGGTAAGGAGAGAGCTGTCAGTTTCTGAGACTTGATACAGTGTTTGATTTGCATTCTTTTTAATTTGGCCTGTAATCTTGCAGTTGTCGTGTTTAATTTGCAAAAACCTGGAAATATTGCGAAAGCTATTGTTGGTGAGAAGGTTGGCACGTTTATAGGCTGCACAAAAGATCAGGACCAGATTGTGGGGAATGCACTGGATCAAGAAAGAAGATTGGTGAACGAGTTATGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA005240