BGIOSGA005242

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Revision as of 11:18, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA005242| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA005242, complete gene.| tag = P0458E0...")
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Gene Name

BGIOSGA005242

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA005242, complete gene.

LocusTag

P0458E05.20

Ensembl Transcript ID

BGIOSGA005242-TA

Ensembl Protein ID

BGIOSGA005242-PA

Length

4298

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:46631218..46635515

Sequence Coding Region

46631218..46632885,46633165..46633232,46633297..46633331,46633500..46633573,46634003..46634238
,46634470..46634556,46634868..46634967,46635096..46635515

Genome Context

<gbrowseImage1> name=IndicaChromosome01:46631218..46635515 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:46631218..46635515 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGTCGTCGTCGGCGGCGCCGGCGAGGAAAGAGAATGGCACCGTCGCCGCCCCCGCCGCCTCATCCGCCGCCGCCAGCAACACGTTCCACGTGCTCAACTCCGGCAGCGCCGCCGCCGCCGTCGCAGCCGGACGTGCGTATGTTCAGTCGCCGCGAGCGACGGCGCTGCGGTCGCCGCAGGTGCGAGCCATCACCAACTACGGCATGTTCCCGACCACCGGCGCTTCGGCGGCGAGGACGGCCATGGCGGGGCGAACGATCAATGGTGGCGCGTCGATGCTGACGACGACGACGACGACGACGACGCCACCGCACCTGATCCAGCAGCTCATGGTGTTGGCTGGCTGGACCACCCGGAGTCCGTGGCTCCAGAACCACGCGTCCATGTCGCCGCGGGGCTCGCCGTCGTCGTTCTCCTCCGGGAGATTCTCCGACCCCCGTGGGATGCCGTCGACGTTCGCTTACCGAACACCCGGAGCTAGTAGCGGCCGCGTTATCGACAACGGCGCCGTCGCCGGCCGTGGCAAGCAGATGGCCGGAACTAGCCGCTCACTTGAGATTATCGCCGTTGATACCGGCGCCGGAAGCAGCAAGAACGCGTCGCCGGCCGGCGGCCATGCAAATGCCGGCGTGGTGGTGAAACGTTTGGCCCCTGTGCTCGCGATGCCGAGTGCCGGAGCCGCCGGCAAAGGGAAGGAGGAGGCGGCGGCGGCGGCTCCGTCGCCAAATGGCCGCGGCCGTAAGCGCGCGCCGCCCAAGGTGAGCAATGATCCGGCGGCGGGATCCGACAAGAAGCCGAGGAAGAGGGCCAAGAAGGCGCCGGCCGCTGGCAGCAAGGTGACCGTCCCGGCTGACGTGATCATCGTCGACGACGACGTCAACCAGCCGAGCTCGAACACCGACGCGCAAAGCAACGCCGACGACGATCTGAAGAAGGCGGCCGTCGCTTCCCCTGCGGCGACGCGGAGCAAGACCAGATCAAAGCGCAAGACCAGCAGCAACAGCGCCGCCGCCTCGCCGAGCGCCAGGTCCAGCGCCATCGCCGCCAGGAAGAAGAACAACGCCACAGCGACCGGCACGACGGCGACACCACCACCACCGGCGGCGAAGAAGCACACCGTGCTGACCTGGCTGATAGACACCGGCTTCCTCAAGGACAAAGCGAAGGTGTTCTACGTGCCGGGCGACGCCGGCGCCGCCGAGAAGGTCATCTCCGGCATGGTCACCAAGACGGGAATCCGCTGCCGCTGCTGCAACACCGTCGTCCCCGTGGCTGTGTTCGAAACCCACGCCAGGTGCGAGCGGCCAGGGCAGCCATGGGAGAAGCTGCTGCTCATGTCCGGGAAGCCGCTGTCGAAGTGCATGCAGGAGGCGTGGGCGCAGGAGCGGGTGACCGCCATGCGCGCCCGGGAGAAGGCCATGGCGTCGCTGGAGCAGGAGAAGGAGAAGAGCTCGCAGGCCAAGAGGAAGCTCGCGAAGACGAAGAAGATGCAGCTCCTCGACGGCGTCGTCGTCGTCTCCACCTCTTCTCCTCGTCATCAGGTGAAGAAGAACGGCGGCGGCAAGGATTGCAGCGACGACGCCTGCGGCGTCTGCGCCGACGGCGGCCAGCTGCTCTGCTGCGACACCTGCCCCTCCACCTTCCATCCAGATTGCCTCGCCATCCAGTTCATGATCAAATCTTGGTTACTGTTTGACAGACAGCAACTGACAACAATTTACGGCCAGCAACCGTGGCTCCAGACGGCTCCTGGAGCTGCCATTTCTGCCGATCATCAGTACTGCCGTCCTTTGCAAAGCCCTGGGTTCGAGATCGGCGCATACTGCAGCGAAACCTGCAAAAAGATGTCCTCTCATCTATCAGATATGATAGGAGTCATGAACCATACTGAAGATGGCTTTTCTTGGGCCCTCCTGAAGATTCAGAAGGATGAGCTAGTCACTTCTGAGGACATGCCTGTCATTCTTGAGAGCAATGTGAAGCTTGCAGTAGCTCTGGGTGTACTCAATGAATGCTTTAATCCTGTGCAAGATCGAAGGACTAAGATCGATATGCTCCACCAAGCTGTCTACAGTCTAGGATCAGAGTTCAAACGAGTAAACTATGAGGGATTCTACACCATGGTTCTTGAGAAGGATGGAGAAATCATTTCAGTAGCCTTGCTGAGGTTCCATGGCAGGAAACTGGCTGAGATGCCTTTCGCAGGCACGCTGCCAGCTTACCAGAAACAAGGAATGATGCGTCGCCTTGTCAAGGCTGTTGAAAAGGTGTTGGCGTCGTTGCAAGTGGAAAATCTAGTGATCCCGGCCGTCGCTGATCTAGTGGAAACCTGGAAGAGATCCTTCTCCTTCAGGCCAATGCAGGCAGAGGTCAGGGACGAAGCCAAGAAGCTGAGCTTGGTCGCCATCACCGGGACGACGCTGCTGCAGAAACCCATCTCTGCTCATCAGCAGCAACCAGTTCCATCCCTGAAAGGTAGCAGCAGCAGCAGAAGCAAGCGCGCGTCTGCTCCGGCGACGGTCACCGGCAGCAGCAAGGAAGAGGAGGAGCAGATGACGACGACGGCGGCTCGCCTGACCGACGACGAGCTGGCATTCCTGGAGATGGCACCCTTGTGCAGCTTCACCGACCTGTTGGCCGGAGGCGTCTACCCGACGGGTCTCCAGCTTCTCCGCGGCATGAAGTGA</cdnaseq>

Protein Sequence

<aaseq>MSSSAAPARKENGTVAAPAASSAAASNTFHVLNSGSAAAAVAAGRAYVQSPRATALRSPQVRAITNYGMFPTTGASAARTAMAGRTINGGASMLTTTTTTTTPPHLIQQLMVLAGWTTRSPWLQNHASMSPRGSPSSFSSGRFSDPRGMPSTFAYRTPGASSGRVIDNGAVAGRGKQMAGTSRSLEIIAVDTGAGSSKNASPAGGHANAGVVVKRLAPVLAMPSAGAAGKGKEEAAAAAPSPNGRGRKRAPPKVSNDPAAGSDKKPRKRAKKAPAAGSKVTVPADVIIVDDDVNQPSSNTDAQSNADDDLKKAAVASPAATRSKTRSKRKTSSNSAAASPSARSSAIAARKKNNATATGTTATPPPPAAKKHTVLTWLIDTGFLKDKAKVFYVPGDAGAAEKVISGMVTKTGIRCRCCNTVVPVAVFETHARCERPGQPWEKLLLMSGKPLSKCMQEAWAQERVTAMRAREKAMASLEQEKEKSSQAKRKLAKTKKMQLLDGVVVVSTSSPRHQVKKNGGGKDCSDDACGVCADGGQLLCCDTCPSTFHPDCLAIQFMIKSWLLFDRQQLTTIYGQQPWLQTAPGAAISADHQYCRPLQSPGFEIGAYCSETCKKMSSHLSDMIGVMNHTEDGFSWALLKIQKDELVTSEDMPVILESNVKLAVALGVLNECFNPVQDRRTKIDMLHQAVYSLGSEFKRVNYEGFYTMVLEKDGEIISVALLRFHGRKLAEMPFAGTLPAYQKQGMMRRLVKAVEKVLASLQVENLVIPAVADLVETWKRSFSFRPMQAEVRDEAKKLSLVAITGTTLLQKPISAHQQQPVPSLKGSSSSRSKRASAPATVTGSSKEEEEQMTTTAARLTDDELAFLEMAPLCSFTDLLAGGVYPTGLQLLRGMK</aaseq>

Gene Sequence

<dnaseqindica>1..1668#1948..2015#2080..2114#2283..2356#2786..3021#3253..3339#3651..3750#3879..4298#ATGTCGTCGTCGGCGGCGCCGGCGAGGAAAGAGAATGGCACCGTCGCCGCCCCCGCCGCCTCATCCGCCGCCGCCAGCAACACGTTCCACGTGCTCAACTCCGGCAGCGCCGCCGCCGCCGTCGCAGCCGGACGTGCGTATGTTCAGTCGCCGCGAGCGACGGCGCTGCGGTCGCCGCAGGTGCGAGCCATCACCAACTACGGCATGTTCCCGACCACCGGCGCTTCGGCGGCGAGGACGGCCATGGCGGGGCGAACGATCAATGGTGGCGCGTCGATGCTGACGACGACGACGACGACGACGACGCCACCGCACCTGATCCAGCAGCTCATGGTGTTGGCTGGCTGGACCACCCGGAGTCCGTGGCTCCAGAACCACGCGTCCATGTCGCCGCGGGGCTCGCCGTCGTCGTTCTCCTCCGGGAGATTCTCCGACCCCCGTGGGATGCCGTCGACGTTCGCTTACCGAACACCCGGAGCTAGTAGCGGCCGCGTTATCGACAACGGCGCCGTCGCCGGCCGTGGCAAGCAGATGGCCGGAACTAGCCGCTCACTTGAGATTATCGCCGTTGATACCGGCGCCGGAAGCAGCAAGAACGCGTCGCCGGCCGGCGGCCATGCAAATGCCGGCGTGGTGGTGAAACGTTTGGCCCCTGTGCTCGCGATGCCGAGTGCCGGAGCCGCCGGCAAAGGGAAGGAGGAGGCGGCGGCGGCGGCTCCGTCGCCAAATGGCCGCGGCCGTAAGCGCGCGCCGCCCAAGGTGAGCAATGATCCGGCGGCGGGATCCGACAAGAAGCCGAGGAAGAGGGCCAAGAAGGCGCCGGCCGCTGGCAGCAAGGTGACCGTCCCGGCTGACGTGATCATCGTCGACGACGACGTCAACCAGCCGAGCTCGAACACCGACGCGCAAAGCAACGCCGACGACGATCTGAAGAAGGCGGCCGTCGCTTCCCCTGCGGCGACGCGGAGCAAGACCAGATCAAAGCGCAAGACCAGCAGCAACAGCGCCGCCGCCTCGCCGAGCGCCAGGTCCAGCGCCATCGCCGCCAGGAAGAAGAACAACGCCACAGCGACCGGCACGACGGCGACACCACCACCACCGGCGGCGAAGAAGCACACCGTGCTGACCTGGCTGATAGACACCGGCTTCCTCAAGGACAAAGCGAAGGTGTTCTACGTGCCGGGCGACGCCGGCGCCGCCGAGAAGGTCATCTCCGGCATGGTCACCAAGACGGGAATCCGCTGCCGCTGCTGCAACACCGTCGTCCCCGTGGCTGTGTTCGAAACCCACGCCAGGTGCGAGCGGCCAGGGCAGCCATGGGAGAAGCTGCTGCTCATGTCCGGGAAGCCGCTGTCGAAGTGCATGCAGGAGGCGTGGGCGCAGGAGCGGGTGACCGCCATGCGCGCCCGGGAGAAGGCCATGGCGTCGCTGGAGCAGGAGAAGGAGAAGAGCTCGCAGGCCAAGAGGAAGCTCGCGAAGACGAAGAAGATGCAGCTCCTCGACGGCGTCGTCGTCGTCTCCACCTCTTCTCCTCGTCATCAGGTGAAGAAGAACGGCGGCGGCAAGGATTGCAGCGACGACGCCTGCGGCGTCTGCGCCGACGGCGGCCAGCTGCTCTGCTGCGACACCTGCCCCTCCACCTTCCATCCAGATTGCCTCGCCATCCAGGTCACAAGACTGAACAATTTTCAGACAGAAACTGTGATTGATTTTGTAGCATGTTCAGTTCATGATCAAATCCTGGTTACTGTTTTACATTTTTCAGTTCATGGTCAAGATTATCTTGGTTACTGTTTTACTTTTTTCGGTTCATGTCCAGTTCATGATTAAATCTTGGTTACTGTTTTACAATTTTCAGTTCATGGTCAAATCCTGGTTACTATTTTACATTTTTCAGTTCATGGTCAAACCTTGGTTACTATTTTACATTTTTTGGTTCATGTCCAGTTCATGATCAAATCTTGGTTACTGTTTGACAGACAGCAACTGACAACAATTTACGGCCAGCAACCGTGGTTTTTGCGGCATTTTGAATTCATGATGAAATCTTGGTTGGGTGTTTTGTTTGCTTGATTTCAGGCTCCAGACGGCTCCTGGAGCTGCCATTTCTGCCGGTGCGTGCTCTGCATGTCACATGATGTTCAGGGTTTATCAACATGCCAACAGTGTACACGAAAATGTAATTAATCTCATTGTACATGTCCCTTCATTTTAGCATCTGATCAACCTTGTGTTTCCGAATAGTAACTGATGAGCTTCACTGGAAACACATTAATCTGCAGATCATCAGTACTGCCGTCCTTTGCAAAGCCCTGGGTTCGAGATCGGCGCATACTGCAGCGAAACCTGCAAAAAGGTGAAAATTAGTTATTGATATTTTTTTCCCATAGCATATGCTAGCTCAGCAATAGTCCAACACTAACCGATTTTCCTTAAAATTAGTGCGGAGTACTGTATTTGCTACGCAACTATTGTGTTTATTTATGGAGACACAACTGTATTTCTAATATGGTTGTAGAAGTGTGCCCTAATCTAAAGAAAATTAATCTACACCACTATAATTTAGACCTCCGATGATCGGGAGGTGTAGTTTTTTTTCTATATAATTAATGTCGTAATTTTCTAATAGATGCAATGGTCCTTTTAGTACTGTTTTCAAAATATAAATGTCTGATAGATAGACTCCAAATTCTGTACATTATGCGGTACAAATACAGAGCTTCTGAAATTCTGCTTTATTAATGGAGCACATCTCAGTTATGCTTGTTCTGAATCCGTTTTTCAGATGTCCTCTCATCTATCAGATATGATAGGAGTCATGAACCATACTGAAGATGGCTTTTCTTGGGCCCTCCTGAAGATTCAGAAGGATGAGCTAGTCACTTCTGAGGACATGCCTGTCATTCTTGAGAGCAATGTGAAGCTTGCAGTAGCTCTGGGTGTACTCAATGAATGCTTTAATCCTGTGCAAGATCGAAGGACTAAGATCGATATGCTCCACCAAGCTGTCTACAGTCTAGGGTATGTGCTGCTAGGCATCAAATTGCTAATTCAACTGCTTCAATGTTTCATCCTAAAATATGCAAACCCTGATATGTACGTGTCATATATTTAGTAATTTTGTATGGTTTAGCACTGAACATCAGTTATATGTTTCTCTGGCAAAATATATGTAAGAGCAAGAAGATAACTTCAGAAACATATGAGATAGATTTGTACATTGTCACACAACTTTCATTTGTACTCGAACAGATCAGAGTTCAAACGAGTAAACTATGAGGGATTCTACACCATGGTTCTTGAGAAGGATGGAGAAATCATTTCAGTAGCCTTGCTGAGGTTTGGATCCATTCTCTCTTCAGTTTTTTTTCTCTTAGCGATAGTTCATGTCTTATATTTATTTTCTGATTACTTTGCTCTAGCTTACTTCAGTCAGTATCAGTGTCTTTCACTTTTGACACTTTACTGTTAGCGTCAGTGCTGCTGTTTTTCATAGTTTAGGATTTCTGCATGGCAAGAGAATAACCAGTATAGTTGCAATTATAAAGTTCAGAATTTGTGATACTCGAATGCCTTGGTAAAAATGCCTTTTTGTACCTTTTTCAGCTACTACTATCAAACCAATGTCCTGCCCTGTTTTTCTGTTACAGGTTCCATGGCAGGAAACTGGCTGAGATGCCTTTCGCAGGCACGCTGCCAGCTTACCAGAAACAAGGAATGATGCGTCGCCTTGTCAAGGCTGTTGAAAAGGTGCATAACCTACTGAATCACCAATCCTCCATCCATTTATCATTCATTCAGTTAATTTTTCACTGCAAAGAGATTCAGCAATTGTTGGTGCCGCTTGTCAGACTCATACTGTACATTGAATTTGATAGGTGTTGGCGTCGTTGCAAGTGGAAAATCTAGTGATCCCGGCCGTCGCTGATCTAGTGGAAACCTGGAAGAGATCCTTCTCCTTCAGGCCAATGCAGGCAGAGGTCAGGGACGAAGCCAAGAAGCTGAGCTTGGTCGCCATCACCGGGACGACGCTGCTGCAGAAACCCATCTCTGCTCATCAGCAGCAACCAGTTCCATCCCTGAAAGGTAGCAGCAGCAGCAGAAGCAAGCGCGCGTCTGCTCCGGCGACGGTCACCGGCAGCAGCAAGGAAGAGGAGGAGCAGATGACGACGACGGCGGCTCGCCTGACCGACGACGAGCTGGCATTCCTGGAGATGGCACCCTTGTGCAGCTTCACCGACCTGTTGGCCGGAGGCGTCTACCCGACGGGTCTCCAGCTTCTCCGCGGCATGAAGTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA005242