BGIOSGA005260

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Revision as of 11:18, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA005260| Description = Putative eIF4E| Definition = Oryza sativa Indica Group BGIOSGA005260, complete gene.| tag = OS01G0970400| tid = BGIO...")
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Gene Name

BGIOSGA005260

Description

Putative eIF4E

Definition

Oryza sativa Indica Group BGIOSGA005260, complete gene.

LocusTag

OS01G0970400

Ensembl Transcript ID

BGIOSGA005260-TA

Ensembl Protein ID

BGIOSGA005260-PA

Length

2951

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:46846933..46849883

Sequence Coding Region

46846933..46847207,46848723..46848888,46848972..46849097,46849690..46849755,46849833..46849883

Genome Context

<gbrowseImage1> name=IndicaChromosome01:46846933..46849883 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:46846933..46849883 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGGAGGAGCACGAGACGAGGCCGCCGTCCGCCGGAAGGCCGCCGTCGTCCGGCCGCGGCAGGGCCGACGACGCTGACGAGAGGGAGGAGGGGGAGATCGCCGACGACGACTCCGGCCACGCGCCGCCGCAGGCCAACCCCGCCGCGCCGCACCCGCTCGAGCACGCCTGGACCTTCTGGTTCGACAACCCGCAGGGAAAGTCCAAGCAGGCAACCTGGGGAAGCTCCATCCGCCCCATCCACACCTTCTCCACCGTCGAGGACTTCTGGAGCCTTTATAACAATATCCATCACCCAAGCAAGTTGGTTGTGGGAGCTGACTTCCATTGCTTTAAGAATAAAATCGAGCCAAAATGGGAAGATCCTATCTGTGCTAATGGAGGTAAATGGACCTTCAGCTGTGGCAGAGGAAAGTCCGACACAATGTGGTTGCATACTTTATTGGCAATGATTGGCGAACAATTCGATTATGGGGATGAAATTTGTGGAGCAGTTGTTAGTGTGCGTGGCAAGCAGGAAAGAATAGCTATCTGGACTAAAAATGCTGCCAATGAAGCTGCTCAGATAAGCATTGGGAAGCAGTGGAAAGAATTTCTGGATTACAAGGACTCGATTGGGTTCATTGTTCATGACGATGCAAAAAAGATGGACAAAGGTCTCAAGAACCGCTACACAGTTTGA</cdnaseq>

Protein Sequence

<aaseq>MAEEHETRPPSAGRPPSSGRGRADDADEREEGEIADDDSGHAPPQANPAAPHPLEHAWTFWFDNPQGKSKQATWGSSIRPIHTFSTVEDFWSLYNNIHHPSKLVVGADFHCFKNKIEPKWEDPICANGGKWTFSCGRGKSDTMWLHTLLAMIGEQFDYGDEICGAVVSVRGKQERIAIWTKNAANEAAQISIGKQWKEFLDYKDSIGFIVHDDAKKMDKGLKNRYTV</aaseq>

Gene Sequence

<dnaseqindica>1..275#1791..1956#2040..2165#2758..2823#2901..2951#ATGGCGGAGGAGCACGAGACGAGGCCGCCGTCCGCCGGAAGGCCGCCGTCGTCCGGCCGCGGCAGGGCCGACGACGCTGACGAGAGGGAGGAGGGGGAGATCGCCGACGACGACTCCGGCCACGCGCCGCCGCAGGCCAACCCCGCCGCGCCGCACCCGCTCGAGCACGCCTGGACCTTCTGGTTCGACAACCCGCAGGGAAAGTCCAAGCAGGCAACCTGGGGAAGCTCCATCCGCCCCATCCACACCTTCTCCACCGTCGAGGACTTCTGGAGGTTTCCCACCCCCCCTCCTCTTCTTTTCCCCTCCACAACCTCTCCATCCCTTGCCTTCATGAATCAGTATTGTAGATTCCCCATCTAGCTGTTTAACCCGATTCGATTACATGCGTTAGGCTTGCCACTCATGCCCACTTTACTTTGTCCATGTCATAGGCTTCATGTGTAGGACTGAGATCTAATGTGGATCTAGTTTTTTTTTTTTTTGACTTGGTTGCAGATTAGGCAGAATTGTTTTGAGGAGGAGTACACTCTTTTCGTGAATTATAGTGTTTTTCTTTAAGCAGAATAATATTTCACATCTTCATCGATCAGTTTATGTTTCATGCTGTGGATGGATGCTTTTCTTTGTTTATCTATTTTGATGGAAACTTTACTTAGTATAGGGTGATAATCTGTATATGCTATCATCATAATGTTCTTAGATGAACAACATGTCTTGAGGAAAATTTGTCTTGAGTGATTGATACCCTGGAAGAAAACGTCTCAAGTGAGAAGTACCAAACTCAAATACTTATTCCATGGTCAACTGTAGAATTGAATTCTTAGTGCAGGCCACATGATTTGTTATGCCTTTATTTTAATAAGCCTAACTGTGGTTAAATCGGTGTGCAGAGTTTGTTTGTTGAAATGTCGGTACGCCGATTGTGATTTCTTGGCATGGTTGGGGAAATCAATATTATGTGTTATCCTACATTGTAGTGCATTACATTTGAGGTGCAGAGTTGGGTGTTCTTTGGTTTCTCTTCATGCATATGTGTTGCAAATTGTGTCCAAGTGTTCTGCTTGTTCACACTTAAGCATTTGTTTACAGTCCTGCTGTCATAATTATGCTTTTGGCACCCTTCATGTTTCATGTCAGAAATATTTGTTGATCTTGCTGTATCATTGTGCTGTTGTGCCTTTTGACATCTTTCTGGCTGCATCATAAGCCAGTTATTTATTGGCGTTCTTCTATTTTCAGTTCTAGGTTATTTTGTCTAAGTCAGATATTATATTTAATATAAACATATCTTTTTCCATTGTCATCATGAAAGGACATGAATCAGATCCTTCTAAAATGCGTATGATCCTTCTTTTTTTTTTTCTGGCCGAATATTTGTCATCTTTTACTTTCCATGTAGTATTAGAACTTGGAAGGTGATTGGCTGATGGTGTTTTGTTCTGTTTGGTGATTTTGAATTTTATGTATCTGACATTTATAAAAAGAATGTTAATTCTCTGTGGCTCTATTTTTTTATGAGTAATTTGAGCATCCTGAGTTGATACATGTTCAGAGATCTGAGATAGTCCACGTATGTTGACACATGTGTCGTCCTGAGTTCTCTCGACAGTTTATAACATGTGTCATTTGTCGCAAATTATATCAATGCATGTGCTTCAGGGCTTCTTTCTTTCTGCTAACAGCTCGCTTAAATATTATTATTTTTTGGCAATTTGCTTCAGTATTTTTTTTCCTTCTATCTTTTCATGTATTCCTTTAGTCTAATAAGGTTGAATGTGGTATTTCAGCCTTTATAACAATATCCATCACCCAAGCAAGTTGGTTGTGGGAGCTGACTTCCATTGCTTTAAGAATAAAATCGAGCCAAAATGGGAAGATCCTATCTGTGCTAATGGAGGTAAATGGACCTTCAGCTGTGGCAGAGGAAAGTCCGACACAATGTGGTTGCATACTGTAAGCATTATTTGAATCACTTATTTGCACAGTTATCCTTTATACAAATATCTCCCTAATTCTTTACCTTATCCTGTGCTTAGTTATTGGCAATGATTGGCGAACAATTCGATTATGGGGATGAAATTTGTGGAGCAGTTGTTAGTGTGCGTGGCAAGCAGGAAAGAATAGCTATCTGGACTAAAAATGCTGCCAATGAAGCTGCTCAGGTACTATTTCTAAGATATGTGCTGCTAATTTATTTGTTACCTGCAGATAATAACCACATAGTTTTCAACATCATTAAATTCAAACTTTTACATGTCATTGCTGTCAAATACCACTATGTATTAATAATGGCATGATCTGGTTATCTGGAGCTATTTATGTCTTGAGCCTGTCCAAATGTTGCTCTGTACATGTGGAATGCTCTCAATCTGCATATACACAATGCATAGCTGAAGAGATATATTCCTGAAAAGATTGCAACATTTGGGTGCACTTGCTTAAACTTCCAGGTGAAGTTTGTCATAGGGGGATTTTCATTATTTTGGCCAAGATCATGCTATATACATTGTGCAGCTATTTTAACCAAGGTTTATATTGAAACGTTAAGTTCTGTTCTATCTTGGTGTTCCTTTCGTGCTATATTGTCCGCGTTATCTCTTGTAGTATTTTCTTGCCATTTTAGCGTTTTGTATGACTGCTGCAATATATGCATCTTGTGGCAAGTTTTTTGGTTCCTCATCACATCATTATTATATTTGATTCGCCTAGGTAGGTCAGATAAGCTGAACATAATTGTTTCTCTTTCTTCATCAGATAAGCATTGGGAAGCAGTGGAAAGAATTTCTGGATTACAAGGACTCGATTGGGTTCATTGTTCATGTGAGTAGTCCTTAGCTTTGTTACATTATATGCCTGGATGAATAACTGTTTCTTATTCGTGCCCTTTTTGGTTGTAGGACGATGCAAAAAAGATGGACAAAGGTCTCAAGAACCGCTACACAGTTTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA005260