BGIOSGA005273

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Revision as of 11:18, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA005273| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA005273, complete gene.| tag = OsI_054...")
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Gene Name

BGIOSGA005273

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA005273, complete gene.

LocusTag

OsI_05405

Ensembl Transcript ID

BGIOSGA005273-TA

Ensembl Protein ID

BGIOSGA005273-PA

Length

6441

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:47028586..47035026

Sequence Coding Region

47028586..47028789,47028885..47028961,47029393..47029639,47029729..47030298,47030821..47030994
,47031337..47031463,47031542..47031651,47032530..47032730,47032822..47033389
,47033813..47033885,47034029..47034277,47034681..47035026

Genome Context

<gbrowseImage1> name=IndicaChromosome01:47028586..47035026 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:47028586..47035026 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGTTTGGGCTGCAGGCGAGCGGCGCCGCGGCGTCGTGGGTGGTGGGGCGGATGGGCACCGACGCCCACCTCTACGACGACCCCGACGACGCCTCCATCCCCACCCTGCTCGACTCCCGCTTCGATGCCGACAAGCTCGACGCCCTCAAGCGCCTCCTCGCCCTCATCGCCCAGGGCGTCGATGTCGCCCACTTCTTCCCGCAGGTTGTCAAGAACGTGGCCTCGCAATCGCTGGAGGTCAAGAAGCTCGTCTATCTATACCTCCTCCACTACGCTGAGAAGCGCCAAAATGAAGCTCTTCTTTCAATTAACATATTTCAGAAGGACTTATCTGATATAAACCCATTAGTGAGGGCCTGGGCACTACGAACTATGGCTGGCATTAGACTACACGTCGTTGCTCCACTTGTGTTAGTGGCTGTAAAGAAATGTGCCAGGGATCCATCAGCATACGTTCGAAAATGTGCTGCCTATGCACTTTGTAAGCTGCACGACTTACTTCCAGATGAAACTACATCTTTGGAGGACACGGTAGATGTTTTGTTCAGTGACAATTCCCCGGGAGTAGTGGGAGCTACTGCTGTTGCCTTTAACTCAGTTTGCCCAAATTGTTTACCCTTGATATCAAAGCATTTCCAAAGGCTATGTGAGACACTCCCAGATATTGAAGAATGGGCTCAGATTCTTCTAATCGATATCATCTTGCGATATGTAATAGCTAGACATGGATTGGTGAAGGATTCTTCAATTTTTGCTTCAAATTTGACTTTGAAGAGCCAGGGCAGTGGAGATTCAGCCCTTATTGGCAATGAAACTTGTGGCACTACATCAACCATCACATTGTTCCGACATTACATTGAAGAATATTCGGAATGTTTAGAAGGTGACATAATCAACTGTTCATCCGTGACCAGTAGCACAAACAATGATGTTGCACTACTTTTGAAATGTACATCGCCTCTTCTGTGGAGCCGAAACAGTGGAGTCATACTTGCAGCAGCAAGTGTTCATTGGATCATGGCTCCAGTTGATCAACTGAATAGAGTTGTTGGGCCAATTTTATTTACTCTACGCTCATCTCCTGATGCAACATATGTGATGCTTGGCAACATACTAGTTTTTGCCAAGACAGCCCCACAATTGTTTGCTCCGTTCTATGAAGATTTCTTCATATGCACTTCAGATCCATATCAAACTAAGGCTTTGAAGCTTGAAATACTGACCACCATAGCCACAGAGTCCTCTATTCCAGCAATTTTTGAAGAATTTCAGGATTATATTAAAGAACCGGATAGGAGATTTGTCGCAGATACAGTTGCTGCTATTGCGCTGTGTGCCCAGAAGCTTCCCTCTATCACTACCAGTTGCCTTGGTGGGCTTTTGGCACTAGTATTTTATGAATCATCTATAAGTGATTCTGCTAACTTTGATGGAGAAGCTGCTGTTTTAGTTCAAGCAATTTTGTCTATCAAAGCAATAGTGAGAACAGATCCAGCATCTCATGAAAAGGTGATTGTACGCTTGGTCCGCAGCCTGGACAAAATTAAGGAGCCTGCAGCACGATCCCTGATTATTTGGATATTTGGAGAGTATAGTTCCATAGGAAATATCATTCCAAAGATAACTCCTGCTGTTCTCAAGTATCTTGCATGGTCCTTTGCTGCTGAAATGCTTGAGACAAAGCTTCAGATCTTAAATGCTGCTGCAAAGGTTATCATACATTCTCCTGAAGAACACTTAGAAGAATTCAAAAAGATAATGGCCCATGTCATTAAGCTAGCAACATGTGATTTGAGTTATGACGTCCGTGATCGTGCCCGTTTTATATCAAGACTTTTGCCATACAGCACAACCTATTTAAATGGAAACAACTCCTCATGTCAATCACATAATGAAGATATGTTTAAGGAACTGGCTAATCATATATTTGATGGGAAGATGCCATCAATATTCCATCCAACCAATAACTACCGGATTTATCTTCCTGGTTCCTTGTCACAGGTGGTTCTTCATGCAGCTCCTGGTTACGCACCACTTCCAAAGCCTCAGAGTATGGAATTAATTCATAAGACCATGGAACCAACCAGAGGAGTAGGCAATTCTTCTGAAAGCATTAATTCTGATGCTGAATCTGGATCTTCAACATATGATAGTGGTTCTGTTTATGATTCAGAGAGTGAAGTTGATGGCTCATCTGACAGGAATGCTGCTGATTCTAACACAAAAGATAATCAAGAAGATCCCCTGGTCCATGTTTATGATGCAAGTGTAGATCAAGATATAACAATTAAATCCGAGGAGGCTTCTGGTAGTGAGGATGGCTTGGACCAAACATTACAAGGATCTGCAAGTGTTCCAACTATTGTTCTTGATAAAGAGATACAATTATTGGCTCCCGAACAAACGGAAAAGATGGTTCTTCAGGTTCACTTCCATCACCATCTATTGCCCCTTAAGTTGTCTGTGCTCTGCAATGGGAAAAGGCATCCAGCAAAACTTCATCCTGACATTGCTTATTTTGTGCGGCCACTGCCCATGGACCTAAATGCTTTTCTATGCAAGGAAAACCAACTGAGGGGAATGTTTGAGTATGCTAGAAGGTGCACTTTCAAAGATCATCTTCAGAAGCTTGAGCACAACGATGATAGTGAAGAGCACACTGATAAGAACCTTCTGATAGCCCAGAGCCTCGCGTCAAAAATACTCAGCAATGCCAACTTCCACTTGGTTTCAATGGATATGCCAGTGACCTTCAGCATTGAGGATGCTTCTGGCTTATGCTGGCGATTCAGCAGTGAGATCCTGAGCACTTCAAACCCTTGCCTAATTACCATCCTCGCGGAAGGGCATATCTCGGAACCACTTGACCTCACTGCTAAGGTGAACTCTGAAGATACAGCGTTTGGCCTAAACCTCCTAAACAGAGTTGTAGCAATCATAGAATGA</cdnaseq>

Protein Sequence

<aaseq>MFGLQASGAAASWVVGRMGTDAHLYDDPDDASIPTLLDSRFDADKLDALKRLLALIAQGVDVAHFFPQVVKNVASQSLEVKKLVYLYLLHYAEKRQNEALLSINIFQKDLSDINPLVRAWALRTMAGIRLHVVAPLVLVAVKKCARDPSAYVRKCAAYALCKLHDLLPDETTSLEDTVDVLFSDNSPGVVGATAVAFNSVCPNCLPLISKHFQRLCETLPDIEEWAQILLIDIILRYVIARHGLVKDSSIFASNLTLKSQGSGDSALIGNETCGTTSTITLFRHYIEEYSECLEGDIINCSSVTSSTNNDVALLLKCTSPLLWSRNSGVILAAASVHWIMAPVDQLNRVVGPILFTLRSSPDATYVMLGNILVFAKTAPQLFAPFYEDFFICTSDPYQTKALKLEILTTIATESSIPAIFEEFQDYIKEPDRRFVADTVAAIALCAQKLPSITTSCLGGLLALVFYESSISDSANFDGEAAVLVQAILSIKAIVRTDPASHEKVIVRLVRSLDKIKEPAARSLIIWIFGEYSSIGNIIPKITPAVLKYLAWSFAAEMLETKLQILNAAAKVIIHSPEEHLEEFKKIMAHVIKLATCDLSYDVRDRARFISRLLPYSTTYLNGNNSSCQSHNEDMFKELANHIFDGKMPSIFHPTNNYRIYLPGSLSQVVLHAAPGYAPLPKPQSMELIHKTMEPTRGVGNSSESINSDAESGSSTYDSGSVYDSESEVDGSSDRNAADSNTKDNQEDPLVHVYDASVDQDITIKSEEASGSEDGLDQTLQGSASVPTIVLDKEIQLLAPEQTEKMVLQVHFHHHLLPLKLSVLCNGKRHPAKLHPDIAYFVRPLPMDLNAFLCKENQLRGMFEYARRCTFKDHLQKLEHNDDSEEHTDKNLLIAQSLASKILSNANFHLVSMDMPVTFSIEDASGLCWRFSSEILSTSNPCLITILAEGHISEPLDLTAKVNSEDTAFGLNLLNRVVAIIE</aaseq>

Gene Sequence

<dnaseqindica>1..204#300..376#808..1054#1144..1713#2236..2409#2752..2878#2957..3066#3945..4145#4237..4804#5228..5300#5444..5692#6096..6441#ATGTTTGGGCTGCAGGCGAGCGGCGCCGCGGCGTCGTGGGTGGTGGGGCGGATGGGCACCGACGCCCACCTCTACGACGACCCCGACGACGCCTCCATCCCCACCCTGCTCGACTCCCGCTTCGATGCCGACAAGCTCGACGCCCTCAAGCGCCTCCTCGCCCTCATCGCCCAGGGCGTCGATGTCGCCCACTTCTTCCCGCAGGTTATTCTCCTCCTCCTCCTCCTCCTCGCTTCTTCCCCTTCTTTCCTTCCTTCCTACCGGCCTGCACTGCACCTTGCTAATTGCTTTGTTTGCAGGTTGTCAAGAACGTGGCCTCGCAATCGCTGGAGGTCAAGAAGCTCGTCTATCTATACCTCCTCCACTACGCTGAGAAGTAAGCTAGTACCTCACATGCATTCATCTTGCTTGCAATCCGTTGCAGTTATTAGGGAACAGCTCCTTTTATTTACCTTTGTGTGCTTTATACCAGACTAGCTGTGCCTCTTATCGTTGTTTCAAATGCCTAAATTTGGCTCATGACTGCCATCGATGCTCTTGTAATTCTTTCCATTTCCAAAAAGGCACGCTCTGAGTTACAGCCATACAACACTTGTGCTCTAGCTATGATGTAGTGATGCAGAAAGTATCTAGTACTAATCAATTAGGCAACTGTAATGATAGAAAATCTGATGACTAAAATTTATATATTCGTTCTATTAACTGTAATTTTGAGTAACAAATTCAAACTGTGACTCCCCGTGATCTTGACTTGCTGTTGGAAGTAATTTCACCCTCTCTTTTTTTTATTGCTTGATGTTACTACAGGCGCCAAAATGAAGCTCTTCTTTCAATTAACATATTTCAGAAGGACTTATCTGATATAAACCCATTAGTGAGGGCCTGGGCACTACGAACTATGGCTGGCATTAGACTACACGTCGTTGCTCCACTTGTGTTAGTGGCTGTAAAGAAATGTGCCAGGGATCCATCAGCATACGTTCGAAAATGTGCTGCCTATGCACTTTGTAAGCTGCACGACTTACTTCCAGATGAAACTACATCTTTGGAGGACGTATGTCTAGTATGACCTTTTTTTCCTCGTGCATTGATGTTGAAGATTCATATGTATCTGAATTATGAAGTATGCTAATATGGTTGCAGACGGTAGATGTTTTGTTCAGTGACAATTCCCCGGGAGTAGTGGGAGCTACTGCTGTTGCCTTTAACTCAGTTTGCCCAAATTGTTTACCCTTGATATCAAAGCATTTCCAAAGGCTATGTGAGACACTCCCAGATATTGAAGAATGGGCTCAGATTCTTCTAATCGATATCATCTTGCGATATGTAATAGCTAGACATGGATTGGTGAAGGATTCTTCAATTTTTGCTTCAAATTTGACTTTGAAGAGCCAGGGCAGTGGAGATTCAGCCCTTATTGGCAATGAAACTTGTGGCACTACATCAACCATCACATTGTTCCGACATTACATTGAAGAATATTCGGAATGTTTAGAAGGTGACATAATCAACTGTTCATCCGTGACCAGTAGCACAAACAATGATGTTGCACTACTTTTGAAATGTACATCGCCTCTTCTGTGGAGCCGAAACAGTGGAGTCATACTTGCAGCAGCAAGTGTTCATTGGATCATGGCTCCAGTTGATCAACTGAATAGAGTTGTTGGGCCAATTTTATTTACTCTACGCTCATCTCCTGATGCAACATATGTGGTAATCCCAAAATTTCTTTTTCCTGGTCCATTGGTACTGTATCCTGGATTTCAACTAAGAAGAAATATGGAGCCAAAGCATGTTTTACACTTTTACTCACTTGATCCGTTGTAAATACTCCCATAGACTTTTGATAATGTCATTTCAACAATTTTTAGGTGTAGGCTTGATGTGCTTGACTGCTTTTATAACTTTATGTAAATAAATATTCTATTCAAACCAACTTTTGACCATGCTATGTCTTTCTGGTGCCAAATTAAATCCTTCAGAGCCCAAATGCTTCTGGGACACTGTCAGCCTTGATTTCTGTTTGTACTGATGTTTTGAACTCAATAACTCATTATAGAAGACAAGCCTATGGTGCATAAGCATTCACAACTTTGTGTTGGATGAAGCTAGCAAGTTGATCGTTAATTTTAATTTTATTTTGAGAATCAAATATTGAGATATATTTCTTTGAAATGTTCATGTTCTCTCACTTAAATTTTTACTTGATCTGACAATCCTTTTTAATTCTTGCAGATGCTTGGCAACATACTAGTTTTTGCCAAGACAGCCCCACAATTGTTTGCTCCGTTCTATGAAGATTTCTTCATATGCACTTCAGATCCATATCAAACTAAGGCTTTGAAGCTTGAAATACTGACCACCATAGCCACAGAGTCCTCTATTCCAGCAATTTTTGAAGAATTTCAGGTACTTGTTTGTAAAAGCAATGTACACTCTATATTTGACTTGTCTCAGTGACCTGATAATGTTCTATATGATTCTCAAATGAAGGTTCATTTGAAGTTCATCTTGTGATTATTGGTAACCATATTCATAATATACTGAGGCAATATATTTTTTGAAAACAAATTACCTTTGCTTTGTTGAATTTTATGCATAACAAACAGCATCTTTCTGAATTTCTTCTTGACATTGTTGTCCACTCCCTAATGTGATAAGTAATATCTATCTTAAACAAAAACTGGTATAGTTAGTTGTTGTTAACTCATCCTGTTTGTGCATGTTTATTGTACTTCTTATTCCTGCCAGGATTATATTAAAGAACCGGATAGGAGATTTGTCGCAGATACAGTTGCTGCTATTGCGCTGTGTGCCCAGAAGCTTCCCTCTATCACTACCAGTTGCCTTGGTGGGCTTTTGGCACTAGTATTTTATGGTAATACTGCTACTTCTGCATATTTTTGCGGTAAATGATTCTTCTTGAATATAAAGTTTGATTCTAATTATTTTACAGAATCATCTATAAGTGATTCTGCTAACTTTGATGGAGAAGCTGCTGTTTTAGTTCAAGCAATTTTGTCTATCAAAGCAATAGTGAGAACAGATCCAGCATCTCATGAAAAGGTATTTGTTTTAAATAAGCTTAGCAATCTTGTAACTCCATAGGTGTGTCTCATTTGTATACTTCTCAATATATGGATGATGCATACTTGATTTGACCTCATGATGCCCAACCAGTAATTTAGTACGAAATGCATGAAACCTCTGTTGTATTATACAACTTATGGTTTTTCCTTCATCTCCTTGGATTGAAACAGTTTGTTTTGCTCTTTTGTTAGTCATAACTCATAACTTGGCTACTGAAGGGTGCAAGAATTTTAAGATGATACAATGTAGTTTATTTTATTCTCTCATTTTAAATAGAAAAGGATAGTCCATCAGACTCCCTTTATGTCACCTTTCAATGTGCCTCCCATATTTCATTTTTGTTTACTTAGGCCCCCCATAAGTTAACCAGTCTTGAAAATACCCCTCAATGAGGCATGTTACACTATTTCTGGTAGTTCTATTATCTTTTCTATTTATTAACTTATGTAAGGGCATGTTTAATTATTTCAATAGTTGTTTCAACGGTTTGAGTGCCTTTGGTACTTGTCAGTTCTAGCACAGAATTTCTTGAACTTACAGAGGTACTGAAATCGTGTGATAAGCCACACATTCTAGTAAGAATTTAGTTTTTTTTGGGGAGCAGGGGTGTATTACACAAATATGAACATATATGTGCAAAGTAAACGAAAATGGGATATTGGGAACAATTTGAACAATTGTTTGACATTCAGTGTTTCTTTTTCTGTTTGCAGTCTGGTTGTGTATTTATTGAAAACATGTGCAATAGTAAATATTGAATATTGTGTGCTACTTTGCTCTATTGTTTGAATGTATTTGTTCCTTAATTATACATTAATTTGATATTTTGCTATTTTGCTATTCTTTTCCTGAAGGTGATTGTACGCTTGGTCCGCAGCCTGGACAAAATTAAGGAGCCTGCAGCACGATCCCTGATTATTTGGATATTTGGAGAGTATAGTTCCATAGGAAATATCATTCCAAAGATAACTCCTGCTGTTCTCAAGTATCTTGCATGGTCCTTTGCTGCTGAAATGCTTGAGACAAAGCTTCAGATCTTAAATGCTGCTGCAAAGGTCCCTCCATCCTCCATCTCTCCCTCTCTGTAAGAATTCAAAAGGTTCCTTTTCTCTTCTGTGGGGATCGCTAATTGTTTTTCCTTTACAGGTTATCATACATTCTCCTGAAGAACACTTAGAAGAATTCAAAAAGATAATGGCCCATGTCATTAAGCTAGCAACATGTGATTTGAGTTATGACGTCCGTGATCGTGCCCGTTTTATATCAAGACTTTTGCCATACAGCACAACCTATTTAAATGGAAACAACTCCTCATGTCAATCACATAATGAAGATATGTTTAAGGAACTGGCTAATCATATATTTGATGGGAAGATGCCATCAATATTCCATCCAACCAATAACTACCGGATTTATCTTCCTGGTTCCTTGTCACAGGTGGTTCTTCATGCAGCTCCTGGTTACGCACCACTTCCAAAGCCTCAGAGTATGGAATTAATTCATAAGACCATGGAACCAACCAGAGGAGTAGGCAATTCTTCTGAAAGCATTAATTCTGATGCTGAATCTGGATCTTCAACATATGATAGTGGTTCTGTTTATGATTCAGAGAGTGAAGTTGATGGCTCATCTGACAGGAATGCTGCTGATTCTAACACAAAAGATAATCAAGAAGATCCCCTGGTCCATGTTTATGATGCAAGTGTAGATCAAGGTCAGACGGCTAGGGATGTCGAGGATAATTTTGTATCTCTCATCACTACTGATTTGACTGANCATTACATGGTCTACAGGNTCAGNNCCTTGNGNANAAANCNANTTTTGGGNGNNCCCCCNNTTGTGGTTGACCTTGAAANAACGNCNTTCCNCCNTNGTNGCNNTGNNANANCNCNANGNNNTNNTCAGAGNGTGNTTCNTANCNANCNAANGNGCANTCTCTNNNCTGGCTAGNAAGGTGGTCTTTTACGCAANTNNCGGAGCTTTGAGCGAAAACCTAAATTGCACATGTTGTTAGACCCATCAAATAGTAATGGTCTAAGTGTTCTTTATGCCTTTTCATCTGAGGTTTCACCCGTATCACGCTTGCTAGTGTGTGTAGACTTGTTATTTGAGAATGTTTCAACAAACCAACTGGCAGATATAACAATTAAATCCGAGGAGGCTTCTGGTAGTGAGGATGGCTTGGACCAAACATTACAAGGATCTGCAAGGTACTATCCATCTTTAATTGGTTCATTTTAATGTCATTTCATTTGTGTCGTCAGAATGCTTGCAGTGGCATTCTGTTATCTGTTTGTGTTTATTAACTTATTTTAATTACTGTCTCATTTATTGTAATCATTTTGGCCTGCAGTGTTCCAACTATTGTTCTTGATAAAGAGATACAATTATTGGCTCCCGAACAAACGGAAAAGATGGTTCTTCAGGTTCACTTCCATCACCATCTATTGCCCCTTAAGTTGTCTGTGCTCTGCAATGGGAAAAGGCATCCAGCAAAACTTCATCCTGACATTGCTTATTTTGTGCGGCCACTGCCCATGGACCTAAATGCTTTTCTATGCAAGGAAAACCAACTGAGGGGAATGTTTGAGTATGCTAGAAGGTCAGTAAATCCCCACCAGTCTCCACTATGTTATACTTCTGGTCGTGTTACGGACTTCCACCAGTCTCCACTATGTTATACTTCTGGTCATGTTACGAGACTTCCACCAGTCTCCACTATGTTATAATGCTAGCTTTATTTGCACATATTGGTTTCTCTGAAGTTTCAGCATTTAGGGCTTATCCTAATAATGCCATAACACCACCTTAAGCTTTTCATATTTGCATATTTGCAATTTCTTGCTATTGCTTATGGGTTTTATTACTTACCAAAAAGGCAATCAGAACAAAAAAAAAAACAAAGGAAGAGTTTCTTGGTTGTTTTCTGTACTATATCAAATTAGGCTTCATGATCACTTCTATCGACTATATATGCTAGAACTAATATGAAGACATCACCACAGGTGCACTTTCAAAGATCATCTTCAGAAGCTTGAGCACAACGATGATAGTGAAGAGCACACTGATAAGAACCTTCTGATAGCCCAGAGCCTCGCGTCAAAAATACTCAGCAATGCCAACTTCCACTTGGTTTCAATGGATATGCCAGTGACCTTCAGCATTGAGGATGCTTCTGGCTTATGCTGGCGATTCAGCAGTGAGATCCTGAGCACTTCAAACCCTTGCCTAATTACCATCCTCGCGGAAGGGCATATCTCGGAACCACTTGACCTCACTGCTAAGGTGAACTCTGAAGATACAGCGTTTGGCCTAAACCTCCTAAACAGAGTTGTAGCAATCATAGAATGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA005273