BGIOSGA005276

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Revision as of 11:18, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA005276| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA005276, complete gene.| tag = P0459B0...")
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Gene Name

BGIOSGA005276

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA005276, complete gene.

LocusTag

P0459B04.5

Ensembl Transcript ID

BGIOSGA005276-TA

Ensembl Protein ID

BGIOSGA005276-PA

Length

3329

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:47063045..47066373

Sequence Coding Region

47063045..47063527,47064547..47064876,47065701..47065816,47066080..47066170,47066281..47066373

Genome Context

<gbrowseImage1> name=IndicaChromosome01:47063045..47066373 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:47063045..47066373 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCCACCACCAAATCCTTTCTCCCTCCCCCATTCATCGCCCTCTCTTCGAACCCTCGTCCCACCACCCTCGCTCCCACTCCCAATCCCAGGCCCCGCCGCCGCAATTCCCTCGCTATCTGCTCCGCCTCCGCCTCGGGCGACCCTTCTCCCCCACCCGAGGCCGAGGGCGGCAGCAACCCGCTCCTCGCGCTATGGCGCCGCACGCTCCACCCCCTGGGTGACTACGGCTTCGGCAAGCGCAGCGTCTGGGAGGGCGGCGTCGGCCTCTTCATGGTCTCCGGGGCCGCGCTGCTCGCCCTCGCCCTCGCCTGGCTCCGGGGATTCCAGCTCCGCGCCCGCTTCCGCAAGTACCAAGCCGTCTTCGAGTTCACCCAGGCCTGCGGGATTTGCGTCGGCACCCCCGTCCGCATCCGCGGTGTCACCGTCGGCAACGTCGTCCGCGTCGACTCTTCCCTCAAGAGCATCGATGCTTATGTTGAGGTTGAAGATGATAAAATTATTGTGCCCCGCAATTCAGTGGTTGAGGTGAATCAGTCTGGTCTTCTAATGGAGACACTGATTGATATAACACCAAAAGATCCACTCCCTACACCTTCAGTTGGTCCTCTTGACCCAGACTGTTCCAAAGAAGGTTTAATTCTCTGTGACAAAGAGAGGATGAAAGGACAACAAGGAGTAAGCTTAGACGCACTGGTTGGAATATTTACTCGTCTAGGAAGAGAAATGGAGGAAATTGGTGTTCACAAAAGCTACAAGTTGGCTGAAAAAGTAGCATCTATAATGGAAGAAGCGCAGCCTCTTCTTTCACGGATTGAAGCATTAGCTGAAGAAATTCAACCTCTGCTTTCTGAGGTTCGTGATAGTGATCTGGTGAAGGATGTCGAGATTATAGCTAAAGGTCTGGCTGATGCATCCGGTGATTTAAGAAGGCTGAAGTCTTCCATGCTTACCCCTGAGAACACCGATCTTATTAAGCAGTCTATTTTCACCCTTATCTTTACTCTGAAGAATATTGAGAGTATCAGCTCAGACATCTCTGGTTTCACCGGTGACGACGCGACAAGGCGGAACATCAAGCTGCTTATCAAGTCACTTAGCAGACTGTTGTGA</cdnaseq>

Protein Sequence

<aaseq>MATTKSFLPPPFIALSSNPRPTTLAPTPNPRPRRRNSLAICSASASGDPSPPPEAEGGSNPLLALWRRTLHPLGDYGFGKRSVWEGGVGLFMVSGAALLALALAWLRGFQLRARFRKYQAVFEFTQACGICVGTPVRIRGVTVGNVVRVDSSLKSIDAYVEVEDDKIIVPRNSVVEVNQSGLLMETLIDITPKDPLPTPSVGPLDPDCSKEGLILCDKERMKGQQGVSLDALVGIFTRLGREMEEIGVHKSYKLAEKVASIMEEAQPLLSRIEALAEEIQPLLSEVRDSDLVKDVEIIAKGLADASGDLRRLKSSMLTPENTDLIKQSIFTLIFTLKNIESISSDISGFTGDDATRRNIKLLIKSLSRLL</aaseq>

Gene Sequence

<dnaseqindica>1..483#1503..1832#2657..2772#3036..3126#3237..3329#ATGGCCACCACCAAATCCTTTCTCCCTCCCCCATTCATCGCCCTCTCTTCGAACCCTCGTCCCACCACCCTCGCTCCCACTCCCAATCCCAGGCCCCGCCGCCGCAATTCCCTCGCTATCTGCTCCGCCTCCGCCTCGGGCGACCCTTCTCCCCCACCCGAGGCCGAGGGCGGCAGCAACCCGCTCCTCGCGCTATGGCGCCGCACGCTCCACCCCCTGGGTGACTACGGCTTCGGCAAGCGCAGCGTCTGGGAGGGCGGCGTCGGCCTCTTCATGGTCTCCGGGGCCGCGCTGCTCGCCCTCGCCCTCGCCTGGCTCCGGGGATTCCAGCTCCGCGCCCGCTTCCGCAAGTACCAAGCCGTCTTCGAGTTCACCCAGGCCTGCGGGATTTGCGTCGGCACCCCCGTCCGCATCCGCGGTGTCACCGTCGGCAACGTCGTCCGCGTCGACTCTTCCCTCAAGAGCATCGATGCTTATGTTGAGGTACCCCCTACTTACACCATCCTCTTCCTTTTTTATGCATCCTTTTGCATTCCTTCAACAAACCAAAATGGAAGATGGCAGATCTAGTACATGCACCATAGGACTACTTCTTATCACCTTACTTATATTACTCTCTCATACAATTGGCACTCAAACCATGTAACTTGTCAAAATGGCAATGCATATTCTTGTGTTTAATTTTAACGCATTTTCTTGCTAACTGCTTCGCCTTCTTTCTAATTATCAACTGAAATTTGATGCTAACCTAATCAATCAGAATCAAATGACTGCTTCACGCATGTCAAATTCTATGCAGATATATGCCATTTCCTTCTAAAGAAGATTGCCATTGCTTACTGATGCTGAAATTAATTGCATCTAGAGTAGTTTTTTTTTTCTAAAAAAAATATTGGATCTAGAGTAGTTAGTTGCTCAAATTTTGTTCATTCGGAAAAGCTGAGATCTTTACTCTTGCTGGCTAGTTTATTTTAACCTGGCTGTGTAGCCACTCGATTTACCTAAGCTGGTAATCTGAACAGCAAATTCCTGGTATTGTAACTTGTCATGATTCATGATTCATGGATGGGAGGGGTCATGTCCTCCTTTTAGATGCTTAGAGTTTTCCACTACTCACTTACTCAGACTTCACATTTTCAATATAAAGTTGGTGTTGCAGGTGTGCGACTTATTTGAAAGCAAGACTTTGCATTGACTTTGCCCTAAATGCCTATTAATTCATAGAACAACTTTCTGAAAAGAATCCATGGTTTAGTTTGTGCAATGCAATGTGTCATTAATTTGCATTTATGCTGTTTCACTAAGCTTCAGGGCTCATTGGTTCTCTTACGGATACTTTCCAGTTACACAAATAGGTTGAGTTTACCTTTCAATCATCACTCCTTTTAGTAAGTTGGGCAACAAGAGCACCTTCATTTTGGTATTGCCTATTGTCTACATATGTGCATTTCTTACTGTATAATTCCCCCTGGGCTGAATATTTGCTATCTCTTGTATGATAGGTTGAAGATGATAAAATTATTGTGCCCCGCAATTCAGTGGTTGAGGTGAATCAGTCTGGTCTTCTAATGGAGACACTGATTGATATAACACCAAAAGATCCACTCCCTACACCTTCAGTTGGTCCTCTTGACCCAGACTGTTCCAAAGAAGGTTTAATTCTCTGTGACAAAGAGAGGATGAAAGGACAACAAGGAGTAAGCTTAGACGCACTGGTTGGAATATTTACTCGTCTAGGAAGAGAAATGGAGGAAATTGGTGTTCACAAAAGCTACAAGTTGGCTGAAAAAGTAGCATCTATAATGGAAGAAGCGCAGCCTCTTCTTTCACGGGTACATTTTTCTCACCGTTCTGCTTTTGTATATAGTTTCCATATCCGGAGAAATATTTATAATTTGTCCTATTTAGTTAATCAGATCTCTTTGCAACCTTTTTTTTTCTCACTGCCACTCAATAAGATTTCATGGTTCATATGCTTTACCCCTATGGTGAAATTTTCGTAACCATGCTTGGAAGTGCAACAGCGTTTCCTGATCCTGTGTACCTTTTAAATATTGAAAAGAGTGGTTACTCTGGCAGTTAGTACCACTGGAGTCTCATCCTTTATACCTGACAGTTTTTCCTAACATGTCAATGTATCATGCATATGAAGCCATAAATCATGTAATTATCGTGATTATTACTTGCAAATAAATTTTCAGCCTTCATTCATTTGTTTTCATGCCTTTATGTACAACTCAACTATTGGCATGTTTTTTTTTATGTCTTGTATATGGTTCAAATTGGTTGTGTACCAAAGTATATGATCTATTTGTGTATGATATACCAAGAAAAAAATGATCCATCCTGTCCATACTTAAGTCAGACGTTGGTTGACCACTGAATGTTCCAGGGTATGGTCAATTTTTGTCCTATCACATAGTTGCACTGGTTGGCATGCATGTAGCACTGTCAAGAGAGGGGACCTCCATTTAGGGGGGATATGTTGTTAGGTTTCTTGTTTATGTCACATGCTTTTGAGAAAGAAAAAAAAAAGGTTGTGGGTGGTACTTCCTCCATATGTGCAGCTCTGTCGAATCCTTTTTTTTTGGGTGCAAAATCGAAAAATGTTCCTGAATAGTAGTACTCATCCATTTTAATGTTAGTGATGGAACAGATTGAAGCATTAGCTGAAGAAATTCAACCTCTGCTTTCTGAGGTTCGTGATAGTGATCTGGTGAAGGATGTCGAGATTATAGCTAAAGGTCTGGCTGATGCATCCGGTGATTTAAGGTACTTCTGGAAAGCATTGTGGCCTAATACATATTATTTATACAACTATGAGTTATAACATCTTGCTTGAGGTAAGTCATGATAAGTAATGATATATATTGGAGAATTTGATATAAACCATCAAGCTATGACTTTCTTATTATGAAAGAGTCTACAAGATTATACTAGTATTCAAATAGACCTCTCTAAATATACACTGCATCATATTATATAATGTACCAAAGATAAATGTGATGATAAACTTTTCTTGTGCTACCCTGCAGAAGGCTGAAGTCTTCCATGCTTACCCCTGAGAACACCGATCTTATTAAGCAGTCTATTTTCACCCTTATCTTTACTCTGAAGAATATTGAGGTTTGCATATATATACTCTTTTAACTTTCTTTAGGTCAGTTTTGGTTATTTCTCAGTCAGATCATCAGACTGAAATGTATTTGCTGTACCCGTCCTTGGTTACTTCGCAGAGTATCAGCTCAGACATCTCTGGTTTCACCGGTGACGACGCGACAAGGCGGAACATCAAGCTGCTTATCAAGTCACTTAGCAGACTGTTGTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA005276