BGIOSGA020495

From RiceWiki
Revision as of 12:46, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA020495| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA020495, complete gene.| tag = OsJ_227...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA020495

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA020495, complete gene.

LocusTag

OsJ_22749

Ensembl Transcript ID

BGIOSGA020495-TA

Ensembl Protein ID

BGIOSGA020495-PA

Length

4928

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:32883039..32887966

Sequence Coding Region

32887746..32887966,32887571..32887647,32887158..32887430,32886769..32886832,32886330..32886352
,32885977..32886050,32885395..32885884,32885036..32885231,32884640..32884936
,32884078..32884554,32883835..32883983,32883414..32883703,32883039..32883317

Genome Context

<gbrowseImage1> name=IndicaChromosome06:32883039..32887966 source=RiceIndica06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome06:32883039..32887966 source=RiceIndica06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGGCCGTCCTGCTCCTCTCCTTTCTCCTCTTGGCCGCCCCCGCCGCGGCCATCGATATCCTCCGGCGCTCCCTCGCCGCGCAGACCAAAGGAGACCTCGCCTCCATCACCGCTGGGAACCCCCTCGTCGCCAATGCCATGAACGACCGCCTCAAGAACCTCACCGACGCATTTGCTCAGCAGATGGGCAAGGAGTTCCACTACTGCATCAAGGACACGGACGACGAGTGGAATATCGCCTTCAATTTCTCCACTGATCCCACCTTCCTCTCCAACTGCATGCAGGCCACCGATGGAGACGTACCGCAGCGTGTGTGCACCGCCGCTGAGATGAAGTTCTACTTTGAAAGCTTCCTCGACAGCAATGGAAGAAAGAACTACGTGAGGCCCAACAAGAACTGCAACCTCACATCATGGATGGATGGCTGTGAGGCTGGCTGGGCATGCAGTGCAGGCCCGGACCAGAATATCAACTTGCAGGATGCCGTCAACTTCCCTTCCAGAACACTTGATTGCCGAGGCTGCTGTGCTGGATTCTTCTGCCCTCACGGCCTCACTTGCATGATACCTTGCCCTTTGGGAGCATACTGTCCAGAATCTACCTTAAACAAAACCACCGGGATCTGTGACCCGAAGGGATCAACTTCCCAAACCAAATGCTTCCACAAGGGCAGCTGTAAACCAAACTCTGTAAATCAGGACATTACAATATTTGGTGCATTGCTTGTGGGTGCCTTGAGTTTAGTACTGTTGATCATTTACAACTTCTCAGGGCAACTTCTGACCAACCGAGAGAAAAAGCAAGCAAAATCTAGGGAGGCTGCAGCAAGACACGCAAAAGAGACTGCCATGGCTCGTGAAAGGTGGAAATCAGCTAAAGATGTTGCCAAGAAGCACGCCGTTGGGCTGCAGTCATCGCTGTCCCGCACATTCTCGCGCAAGAAAACTCTTAGGACACACGAGCCATCCAAAGGAGCGGTTGAAACTGATGTGGAGCCATCGAAAGGATCAGGAGAAAAGAAGAGTAATCTTACTGACATGATGCGCTCGCTTGAAGAGAACCCGGAAAAAGGAGAAGGCTTCAATGTGGAAATAGGAGAAAAAAAGAAAACTAAAGGGAGGCATGCACACACTCAGAGCCAAATTTTCAAGTATGCATATGGACAGATTGAGAAGGAAAAGGCAATGGAACAGCAGAATAAAAATCTGACCTTTTCAGGTGCAGGGAAGACCACATTCTTGAGTGCAATTGCAGGTAAGGCAACTGGATGCGAGACAACAGGTATGGTACTTATCAATGGGAAAATGGAACCCATCCGTGCGTACAAGAAAATCATTGGCTTTGTCCCACAAGATGACATTGTCCATGGGAACTTGACTGTTCAGGAGAATCTTTGGTTTAATGCACGATGCAGGCTTTCTGCTGACATGTCAAAAGCTGACAAGGTTCTTGTTGTGGAAAGAGTTATCGAGGCTTTGGGACTGCAAGCAGTTCGTGATTCTTTGGTTGGAACTGTCGAACAGCGTGGCATCTCTGGTGGCCAGCGTAAACGAGTAAATGTTGGGCTAGAAATGGTCATGGAACCCTCTGTGTTGATTTTAGATGAGCCAACGTCTGGTTTGGACAGCTCTTCGTCTCTGCTTTTACTTCGTGCACTACGGCGGGAAGCTCTTGAAGGTGTGAACATCTCTATGGTGGTTCATCAACCCAGCTATACATTGTATAAGATGTTTGATGATTTGATACTTCTCGCGAAAGGTGGCTTGACGGTTTACCATGGACCTGTGAAGAAAGTGGAGGAATACTTTTCAGGATTGGGGATTGTTGTCCCAGATCGTGTGAACCCGCCAGACTACTACATAGACATCTTGGAGGGAATTGTGAAGCCAAACGCAAATGTTGCAGTTAATGCCAAAGATCTCCCTCTGCGATGGATGCTGCACAATGGGTATGAAGTTCCACGGGATATGCTGCAGAGTGGTTCTGATGCAGAATCGTCGTTTAGGGGAGGAGGGGATCTTACCCCTGGCGGTGACACTGGGCAGTCTATTGCTGGTGAAGTGTGGGGCAATGTCAAGGACATAGTTGGGCAGAAGAAGGATGAGTATGATTACAACAAATCTTCTCAAAACTTATCTAATCGATGCACTCCTGGCATTCTCAGGCAGTACAAGTACTACCTGGGGAGGTGTGGCAAGCAAAGGCTCCGTGAAGCTAGAATACAAGGCGTTGACTATCTGATCCTGGGCCTTGCTGGTATATGTCTAGGGACATTAGCTAAAGTGAGCGACGAGACGTTTGGAGCACTCGGTTACACATACACTGTCATTGCCGTCTCTCTGCTGTGCAAGATTGGAGCGCTGAGATCATTCTCTCTGGAGAAGATACACTACTGGAGGGAGAGAGCATCTGGAATGAGCTCGTTGGCGTACTTCATGTCGAAAGACACAATAGATCACTTCAACACGATCATCAAGCCGATCGTTTACCTGTCCATGTTCTACTTCTTCAACAACCCAAGGTCGTCGATATGGGAGAACTACGTAGTTCTTGTGGCGCTGGTGTACTGCGTGACAGGGATCGGCTACACATTTGCGATATTCTTCCAGCCAGGATCGGCACAGCTGTGGTCAGCGCTGCTTCCGGTAGTGCTGACTCTGATAGCAACGCAGCAGAAGGACACCTTCTTCGCGAACCTGTGCTACACCAAGTGGGCGCTGGAAGGGTTCGTGATCGCGAATGCGCAGAGGTACTCGGGCGTGTGGCTCATAACGCGATGCGGCTCCCTCCTCAAGAGCGGCTACGACATCAACGACAGGTTCCTCTGCATTCTCGTCCTCGCCGCCAACGGTGTCCTCTTCCGCGGCGTCGCCTTCTTCTGCATGGTCATCTTCCAGAAGCACTGA</cdnaseq>

Protein Sequence

<aaseq>MAAVLLLSFLLLAAPAAAIDILRRSLAAQTKGDLASITAGNPLVANAMNDRLKNLTDAFAQQMGKEFHYCIKDTDDEWNIAFNFSTDPTFLSNCMQATDGDVPQRVCTAAEMKFYFESFLDSNGRKNYVRPNKNCNLTSWMDGCEAGWACSAGPDQNINLQDAVNFPSRTLDCRGCCAGFFCPHGLTCMIPCPLGAYCPESTLNKTTGICDPKGSTSQTKCFHKGSCKPNSVNQDITIFGALLVGALSLVLLIIYNFSGQLLTNREKKQAKSREAAARHAKETAMARERWKSAKDVAKKHAVGLQSSLSRTFSRKKTLRTHEPSKGAVETDVEPSKGSGEKKSNLTDMMRSLEENPEKGEGFNVEIGEKKKTKGRHAHTQSQIFKYAYGQIEKEKAMEQQNKNLTFSGAGKTTFLSAIAGKATGCETTGMVLINGKMEPIRAYKKIIGFVPQDDIVHGNLTVQENLWFNARCRLSADMSKADKVLVVERVIEALGLQAVRDSLVGTVEQRGISGGQRKRVNVGLEMVMEPSVLILDEPTSGLDSSSSLLLLRALRREALEGVNISMVVHQPSYTLYKMFDDLILLAKGGLTVYHGPVKKVEEYFSGLGIVVPDRVNPPDYYIDILEGIVKPNANVAVNAKDLPLRWMLHNGYEVPRDMLQSGSDAESSFRGGGDLTPGGDTGQSIAGEVWGNVKDIVGQKKDEYDYNKSSQNLSNRCTPGILRQYKYYLGRCGKQRLREARIQGVDYLILGLAGICLGTLAKVSDETFGALGYTYTVIAVSLLCKIGALRSFSLEKIHYWRERASGMSSLAYFMSKDTIDHFNTIIKPIVYLSMFYFFNNPRSSIWENYVVLVALVYCVTGIGYTFAIFFQPGSAQLWSALLPVVLTLIATQQKDTFFANLCYTKWALEGFVIANAQRYSGVWLITRCGSLLKSGYDINDRFLCILVLAANGVLFRGVAFFCMVIFQKH</aaseq>

Gene Sequence

<dnaseqindica>1..221#320..396#537..809#1135..1198#1615..1637#1917..1990#2083..2572#2736..2931#3031..3327#3413..3889#3984..4132#4264..4553#4650..4928#ATGGCGGCCGTCCTGCTCCTCTCCTTTCTCCTCTTGGCCGCCCCCGCCGCGGCCATCGATATCCTCCGGCGCTCCCTCGCCGCGCAGACCAAAGGAGACCTCGCCTCCATCACCGCTGGGAACCCCCTCGTCGCCAATGCCATGAACGACCGCCTCAAGAACCTCACCGACGCATTTGCTCAGCAGATGGGCAAGGAGTTCCACTACTGCATCAAGGACACGTACGTACGATCATTCATTCATTTACCCGCTCCCATCTCCATGCATCTTCCAATTGTTTTTCTTTTCTTTCTTCTCTACATACATACATACATTACAGGGACGACGAGTGGAATATCGCCTTCAATTTCTCCACTGATCCCACCTTCCTCTCCAACTGCATGCAGGCCACCGATGGTACGGTACTTCATTTCAATCCATTATTATATTCCTCCTTCCCTCCCTCCGTCTTATATATTGAGATGAGTATTATATATTATACTCCATTGATTATTAATTTCTCGATTAATATATATATTCGATCGATCGGTCAACAGGAGACGTACCGCAGCGTGTGTGCACCGCCGCTGAGATGAAGTTCTACTTTGAAAGCTTCCTCGACAGCAATGGAAGAAAGAACTACGTGAGGCCCAACAAGAACTGCAACCTCACATCATGGATGGATGGCTGTGAGGCTGGCTGGGCATGCAGTGCAGGCCCGGACCAGAATATCAACTTGCAGGATGCCGTCAACTTCCCTTCCAGAACACTTGATTGCCGAGGCTGCTGTGCTGGATTCTTCTGCCCTCACGGCCTCACTTGCATGATACGTACGCATTCTACTAGTCTACTCTATCATCCATGCATCATCATATCCTGTCAATTAAAAAAATTGCGTACATGTATGTAATACCAAGAGTATTAATTAATTGATCAACGGCTATCTACATATATACATAATGAGTACATGAGGTAGATAGCACAATACCTTACTGCAAATAACACAAATATGGTCCTCTCTCTATACACACACACATAAGATCTTCAAGGGAGACCTTCTCTGGCTTGTTATATTCAGGAGTTGAGACTTAATTTCAAGATTTACTTCTTGCAGTATACAAACATTCTGATTAGCTACATCCACTATGCATGCAGCTTGCCCTTTGGGAGCATACTGTCCAGAATCTACCTTAAACAAAACCACCGGGATCTGTGACCCGTAAGTACATACTTGCATTTCTCTCCACTCTCCAGTATGTGGAAAGACTCTGGATTGTTTTACCAATATTAAATACTTGGTGCAGATACAACTATCAGCCACCTCCTGGGAAGCCGAATCATACTTGTGGTGGTGCTGATAGATGGGCAGATGTTGTTAGCACCGATGATGTTTTCTGCCCAGCCGGCTTCTACTGTCCAAGCACTATAAAGAAACTCTCTTGTAGTAGTGGGTAATCCTATCTAACAAATGCTTCAATTGTAAACTGACCAACCTCCTATAGAATGGTTCTCATGCTATTACATATGCTACTAATTTTTTAGTTGCTTTAGGTGACAGGAAGCATTTTAAGATTTATGTCCTCGCCAAATACTGACAGATTTATGTTGCTTGCACCTTTGCAGTTTCTATTGCAGGAAGGGATCAACTTCCCAAACCAGTAAGTTATATATATGCCAGACCCAATGGCTACTTCTCTACTTTAACCATGTGACAATGTATGTGTGTGAATCGGAATGACACATATCTAATACAATAAATTTGTACATACTCCCCATCTTAATGAAATTTGATCGGCCTTTCCTTCGGCCGACCCGGCAAAAATAAATAAATGTAACCACATACTTCACTGTTTTTTTTGGTATACATCTCCTGGGTGTTACCTGCTTCTTGAAATTGCCAGCTTCTGAGAGTAGTTGCTTTATTTTCTTAACTGCAGAATGCTTCCACAAGGGCAGCTGTAAACCAAACTCTGTAAATCAGGACATTACAATATTTGGTGCATTGCTTGTGGTAAAGTACAACTGTAGTGTGCTCAATAGTACTATGATTGTTCCAATCTAGCTATGAAGTTGAGCTTACTCTGCTCTTTTACGACTCTGTAGGGTGCCTTGAGTTTAGTACTGTTGATCATTTACAACTTCTCAGGGCAACTTCTGACCAACCGAGAGAAAAAGCAAGCAAAATCTAGGGAGGCTGCAGCAAGACACGCAAAAGAGACTGCCATGGCTCGTGAAAGGTGGAAATCAGCTAAAGATGTTGCCAAGAAGCACGCCGTTGGGCTGCAGTCATCGCTGTCCCGCACATTCTCGCGCAAGAAAACTCTTAGGACACACGAGCCATCCAAAGGAGCGGTTGAAACTGATGTGGAGCCATCGAAAGGATCAGGAGAAAAGAAGAGTAATCTTACTGACATGATGCGCTCGCTTGAAGAGAACCCGGAAAAAGGAGAAGGCTTCAATGTGGAAATAGGAGAAAAAAAGAAAACTAAAGGGAGGCATGCACACACTCAGAGCCAAATTTTCAAGTATGCATATGGACAGATTGAGAAGGAAAAGGCAATGGAACAGCAGAATAAAAATCTGACCTTTTCAGGTGTGATATCTATGGCCACCGATGAAGATATCAGGACCAGACCTAGAATTGAGATTGCTTTCAAAGACCTTACTCTAACTAAAGGGGAGTAAGAAAAAACTGTTAAGGTCTGTGACCGGAAAGCTTATGCCTGGTCGGGTAGCTGCTGTGATGGGCCCATCAGGTGCAGGGAAGACCACATTCTTGAGTGCAATTGCAGGTAAGGCAACTGGATGCGAGACAACAGGTATGGTACTTATCAATGGGAAAATGGAACCCATCCGTGCGTACAAGAAAATCATTGGCTTTGTCCCACAAGATGACATTGTCCATGGGAACTTGACTGTTCAGGAGAATCTTTGGTTTAATGCACGATGCAGGTACTATTTTTGTAGTAGTAGTATATTTCAATAGATCCTGTGATGGATTCACTAGTGGCTAGGGAACTTGGACTGATGAATATATTTTATCTTGCACAGGCTTTCTGCTGACATGTCAAAAGCTGACAAGGTTCTTGTTGTGGAAAGAGTTATCGAGGCTTTGGGACTGCAAGCAGTTCGTGATTCTTTGGTTGGAACTGTCGAACAGCGTGGCATCTCTGGTGGCCAGCGTAAACGAGTAAATGTTGGGCTAGAAATGGTCATGGAACCCTCTGTGTTGATTTTAGATGAGCCAACGTCTGGTTTGGACAGCTCTTCGTCTCTGCTTTTACTTCGTGCACTACGGCGGGAAGCTCTTGAAGGTGTGAACATCTCTATGGTGGTTCATCAACCCAGGTAAGGTTGTTTGCTCTTTTTCTCCACAACTTTATATGCACCACTCACTCATGCAACTTTATGCTGAGTTTATTTTCTTTTGCAGCTATACATTGTATAAGATGTTTGATGATTTGATACTTCTCGCGAAAGGTGGCTTGACGGTTTACCATGGACCTGTGAAGAAAGTGGAGGAATACTTTTCAGGATTGGGGATTGTTGTCCCAGATCGTGTGAACCCGCCAGACTACTACATAGACATCTTGGAGGGAATTGTGAAGCCAAACGCAAATGTTGCAGTTAATGCCAAAGATCTCCCTCTGCGATGGATGCTGCACAATGGGTATGAAGTTCCACGGGATATGCTGCAGAGTGGTTCTGATGCAGAATCGTCGTTTAGGGGAGGAGGGGATCTTACCCCTGGCGGTGACACTGGGCAGTCTATTGCTGGTGAAGTGTGGGGCAATGTCAAGGACATAGTTGGGCAGAAGAAGGATGAGTATGATTACAACAAATCTTCTCAAAACTTATCTAATCGATGCACTCCTGGCATTCTCAGGCAGTACAAGTACTACCTGGGGAGGTAAAAGAATGGAGTATTTTTTCTTACTATATATCACTGCCATTCTTAAATATGTATATATAAGCATTACTCTTGTTTTCTTCATTCTGTTCAGGTGTGGCAAGCAAAGGCTCCGTGAAGCTAGAATACAAGGCGTTGACTATCTGATCCTGGGCCTTGCTGGTATATGTCTAGGGACATTAGCTAAAGTGAGCGACGAGACGTTTGGAGCACTCGGTTACACATACACTGTCATTGCCGTCTGTAAGTTTCTCAGCCCATCCTGGAAAGGAGTCATGAATTATTTTCAGAGAAATAATGTTTATATAATACGTAATGAGAAAATAAGTAAGTAGTAAAAATAAGGTAATAAGCGTGGGATATATTAATTGCAGCTCTGCTGTGCAAGATTGGAGCGCTGAGATCATTCTCTCTGGAGAAGATACACTACTGGAGGGAGAGAGCATCTGGAATGAGCTCGTTGGCGTACTTCATGTCGAAAGACACAATAGATCACTTCAACACGATCATCAAGCCGATCGTTTACCTGTCCATGTTCTACTTCTTCAACAACCCAAGGTCGTCGATATGGGAGAACTACGTAGTTCTTGTGGCGCTGGTGTACTGCGTGACAGGGATCGGCTACACATTTGCGATATTCTTCCAGCCAGGATCGGCACAGCTGGTAAGGTAGTACGTACTGTTGAATTAGTACGTAGTATAGATGATGGATGATGAATGATTAATTGATTAAGCAATTAAAATGATGGGGATGGATCAGTGGTCAGCGCTGCTTCCGGTAGTGCTGACTCTGATAGCAACGCAGCAGAAGGACACCTTCTTCGCGAACCTGTGCTACACCAAGTGGGCGCTGGAAGGGTTCGTGATCGCGAATGCGCAGAGGTACTCGGGCGTGTGGCTCATAACGCGATGCGGCTCCCTCCTCAAGAGCGGCTACGACATCAACGACAGGTTCCTCTGCATTCTCGTCCTCGCCGCCAACGGTGTCCTCTTCCGCGGCGTCGCCTTCTTCTGCATGGTCATCTTCCAGAAGCACTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA020495