BGIOSGA020496

From RiceWiki
Revision as of 12:46, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA020496| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA020496, complete gene.| tag = OS06G07...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA020496

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA020496, complete gene.

LocusTag

OS06G0731100

Ensembl Transcript ID

BGIOSGA020496-TA

Ensembl Protein ID

BGIOSGA020496-PA

Length

6619

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:32875895..32882513

Sequence Coding Region

32882301..32882513,32881925..32881996,32881612..32881816,32881450..32881534,32881269..32881337
,32880949..32881001,32880708..32880809,32880056..32880266,32879175..32879232
,32878667..32878909,32878178..32878242,32877841..32877934,32876077..32876217
,32875895..32875981

Genome Context

<gbrowseImage1> name=IndicaChromosome06:32875895..32882513 source=RiceIndica06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome06:32875895..32882513 source=RiceIndica06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGGCGGAGGCGGCGGCGGCGGCGGAGGACAACTTCGTCCTGCGCTCCGGCGTCCGCACCGGCCTCAAGCGCGAGTTCGCCTTCGCCATCGCCTCCCAGGCCGCCCTCTCTTCCACCCTCGGCCGCACGCGCTCTTCATCCTCCGCATCTGCCACCCCCAACTCCAAGCGCCCGCGCCGCCCCCCCTGCACGCCGGAATCGGATCCCCCCCGAGCAGTGCTTCGTGGAGTCATTAAACGTGTCGGCATACTGTGCTCTTGTTCCTCCTGCAAAGGACGAACCGTTGTTTCCCCTTATTATTTCGAGGTGCATGCTGGGAGTACTAAAAAGCACCCCTCCGACTACATTTTCCTAGAAAATGGAAACAATCTGCATGATATATTGAGGGCGTGTTCTGATGCTACCTTAGACATGCTGCAATCTGCAATACAGAATGCGATTGGCCCAGCTCCTAAGAAGAGGACATTCAGATGCCAAACTTGCAAAAGTTCATTCGCTACCCTTCGCACTGGGAAATTTGCTTTGTTATGTGATTCATGTCTTGAGTCCAAGGGATCTCAAAACAGTACCAGGACATCAAAGATTGGCCGGAATCCTACTTCCTCTGCTAGGAGATCCAAGAATGAATCCCCAGGTTCAAAGTTAGCCCTTCGCAGTTTGAAGCCCATGCTGGCCGTGCTGCTCGACGCAAACCGTCGAAATATGTCAAACAGACAAAGTGATGACTTGTGCAGCATTTGTTCAGATGGTGGGGAGCTTCTCCTTTGTGATTCCTGCCCAAGAGCTTTTCACAGAGAGTGTGTTGGCTTTACTACTATCCCAAGGGGAACTTGGTGTTGTCGGTATTGTGAGAATAGACAACAGAGAGAAAGTTCTTTGGCATATAACCACAATGCAATAGCTGCTGGGAGGATCGACGGAATTGATCCAATGGAACAAATATTTACAAGGTCCATACGCATTGCCACAACACCAGTGACTGGATTTGGTGGCTGTGCACTGTGCAGGCTCCATGATTTCAGCAAAAAGAAATTCAGTGCGAGAACTGTGCTGCTCTGTGACCAAGCCTTGCCTGAGGGAGCATGGTATTGTACTGCGGACTGCGTTAGGATCAGCGAGACACTGAAGGACTTACTTAGCCGTGGAGCAGAGCCTATTTCTTCTGTAGATGTAGAAATTATAAAGAGGAAATATGAACAGAAAGCTCTAAATAAAGATGGAGATCTTGATGTTAGATGGAGGGTTTTGAAGGACAAAAGTTCAGCAGACAGTAAATTGGTTCTCTCCAAAGCAGTTGCAATTTTCCATGAATCATTTGATCCCATTATCCAAATTGCTACTGGGCGAGACCTTATTCCAGCCATGGTTTACGGCAACACTGTAGTATCTGCGGGTCTTTTCCGTGTTATGGGTAGTGAAATTGCGGAGCTACCCTTGGTTGCTACAAGTAGAGATAGTCAAGGCTTGGGGTATTTCCAAGCGCTGTTTGGCTGCATAGAACGATTGTTGGCATCTCTGAAGGTGAAACATTTTGTGCTGCCAGCTGCAGATGAAGCGGAGTCTATCTGGACACAGCGGTTTGGATTCGTGAAGATAACCCAAGACGAGCTGCGTGAGTACCTCAAGGGTGGGCGAACAACCGTGTTCCAGGGAACATCAACCCTGCACAAGCTGGTCCCAAAATTGGATGGCTAG</cdnaseq>

Protein Sequence

<aaseq>MAAEAAAAAEDNFVLRSGVRTGLKREFAFAIASQAALSSTLGRTRSSSSASATPNSKRPRRPPCTPESDPPRAVLRGVIKRVGILCSCSSCKGRTVVSPYYFEVHAGSTKKHPSDYIFLENGNNLHDILRACSDATLDMLQSAIQNAIGPAPKKRTFRCQTCKSSFATLRTGKFALLCDSCLESKGSQNSTRTSKIGRNPTSSARRSKNESPGSKLALRSLKPMLAVLLDANRRNMSNRQSDDLCSICSDGGELLLCDSCPRAFHRECVGFTTIPRGTWCCRYCENRQQRESSLAYNHNAIAAGRIDGIDPMEQIFTRSIRIATTPVTGFGGCALCRLHDFSKKKFSARTVLLCDQALPEGAWYCTADCVRISETLKDLLSRGAEPISSVDVEIIKRKYEQKALNKDGDLDVRWRVLKDKSSADSKLVLSKAVAIFHESFDPIIQIATGRDLIPAMVYGNTVVSAGLFRVMGSEIAELPLVATSRDSQGLGYFQALFGCIERLLASLKVKHFVLPAADEAESIWTQRFGFVKITQDELREYLKGGRTTVFQGTSTLHKLVPKLDG</aaseq>

Gene Sequence

<dnaseqindica>1..213#518..589#698..902#980..1064#1177..1245#1513..1565#1705..1806#2248..2458#3282..3339#3605..3847#4272..4336#4580..4673#6297..6437#6533..6619#ATGGCGGCGGAGGCGGCGGCGGCGGCGGAGGACAACTTCGTCCTGCGCTCCGGCGTCCGCACCGGCCTCAAGCGCGAGTTCGCCTTCGCCATCGCCTCCCAGGCCGCCCTCTCTTCCACCCTCGGCCGCACGCGCTCTTCATCCTCCGCATCTGCCACCCCCAACTCCAAGCGCCCGCGCCGCCCCCCCTGCACGCCGGAATCGGATCCCCCCGTTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTAGTACTATAAATACAAATACGTACAACTCTGGAAATCCAAACCTCTACATACATACACTCATTTTATTACTATATTCTCCTACTTCGCTTTTAACTTCTTGTAGCAATACTATCTGTCAATTTTTATCCCCAAAACACCAAGCTGGCTCTACGTTACCAAAACGAGGCCACTGTTTCAACTGGCTCCTGAATTTATTAGAGCATTGGGAGCTTGTTTGCAGCCATTAATTTGCTCCTCTTCTTTTTCAGCGAGCAGTGCTTCGTGGAGTCATTAAACGTGTCGGCATACTGTGCTCTTGTTCCTCCTGCAAAGGACGAACCGTGAGCCCCCTCCCTCCATCCTGCATTATTACCTTATTATACTACATTGCAACACTTATCTATGCCATCTATTCAAATTGCAACCAATAAATCTACCATGACTTGCAGGTTGTTTCCCCTTATTATTTCGAGGTGCATGCTGGGAGTACTAAAAAGCACCCCTCCGACTACATTTTCCTAGAAAATGGAAACAATCTGCATGATATATTGAGGGCGTGTTCTGATGCTACCTTAGACATGCTGCAATCTGCAATACAGAATGCGATTGGCCCAGCTCCTAAGAAGAGGACATTCAGATGCCAAACTTGCAAAAGTGAGCTGTCCTCTTGTTTGCATCAAGTGCTCTTCCATTTCACACTCCCAACTTTTACTAAATGTCTAATCTTTCAGGTTCATTCGCTACCCTTCGCACTGGGAAATTTGCTTTGTTATGTGATTCATGTCTTGAGTCCAAGGGATCTCAAAACAGTACCAGGTAAGCTTTGTCACAGTTCCACATTTTGCCAGCGACAGAAAATTTGGAGCTCTATTCCTGATGTTGCTATGGTCTCCCCACACTGGTGATCCCTTGTTATATTGTTGTTTAGGACATCAAAGATTGGCCGGAATCCTACTTCCTCTGCTAGGAGATCCAAGAATGAATCCCCAGGTTCAAAGTATTGCAATTCATCTGCTAGGGGATCCAAGAATGCATTCCCAGGAGTGAAGACTACTAGCACNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATACATGTTTTTCTAATGGATGAACCTGAAAACAACTCAACATGGACATCATCCTAGACCTTTTGTTTCTATGTTAATACATATCTGTAATCAGACATGAAAAATATCTATACTTAATCTAAACACGTTTTATACAATTGTGCATGATGAACAGGTTAGCCCTTCGCAGTTTGAAGCCCATGCTGGCCGTGCTGCTCGACGCAAACCGTGAGTTTATTCTTGTAATGTATTTTGTTGGGGCACCTTCCAAACTCTCACTCTTTTTGCTAACACTACTGCAGGTACCACAACATATATATGTCAAATGGTGTTTCATTACATGAACTGTCAGTTTCACTTTCAAAAGGTCGAAATATGTCAAACAGACAAAGTGATGACTTGTGCAGCATTTGTTCAGATGGTGGGGAGCTTCTCCTTTGTGATTCCTGCCCAAGAGCTTTTCACAGAGGTAATGGAATTATGCCTAACCAGTATGACAAGTTGCTTTTGTGCCTGGTCAAAGCTACCTTCCAGTCTTTCTGGACATGTGGTCATCCAGATATATGTTAGCAGTAGGAGCACATGGATTTACTACATCTTGATGTTTCTAATCTTAAATCAGGTGTGACGATGCCCATCCTTACAGTTGAGCTGCAACACTCTGTTTTTAGGTCTAAAATCTAAATTGTACATAGTGATTCTTCTTGGATTTATCATTTGGTCGTTTTTATGATACTGATTTTATAATTCATGTTCCGCTGTTCCTTACCATCATATTTGGAATCCATAAAGTTGTTATTTTTGCTATCTGGTGTTTATTAGAAATTATACGTCATACATCCTTTTCAATGACACTGTATAATATTGCCTAGGCCAGGTTCTCATTACCGCGCATGCCTTTATGTTGCAGAGTGTGTTGGCTTTACTACTATCCCAAGGGGAACTTGGTGTTGTCGGTATTGTGAGAATAGACAACAGAGAGAAAGTTCTTTGGCATATAACCACAATGCAATAGCTGCTGGGAGGATCGACGGAATTGATCCAATGGAACAAATATTTACAAGGTCCATACGCATTGCCACAACACCAGTGACTGGATTTGGTGGCTGTGCACTGTGCAGGTAAGTTCATCCATTGGTCTTCTATTCAGTCAGCAATATTATGCATGTTTGTCCTTTTTATGCAGTATACGTTCTGTCCATTTTCCATATAAATTATCCTCTGCCAACATATGAAATTCGGCAAGTTGTTATCAGATAACTTTGCCTATAGCATATATGACTTCTGGAGCTAGGGAAGCTCAATATCCAAATGTTTCTTTTCTTTTCTTATTTCCACTTCATTGGACGCTTCTTCATTGATCTGTATGGTGAATGCTCAGCAGTGCAAACATTCAAATTGAATAGTATGTCAGGATTCATGGACAAGCAGAGTGTATTAAGTCGAAGTAGGCCAGATTATGATGATGAGCTGGCAGTACTATACCAGTGAGCCAAATCTGCCAGTGTATTTGGAGGGTATCAGAGGGAAGTTTGTAGCAACTGATAGAACATAAAGAAAATGAAATGAAATCCTGATTCCTCTCCTGTTCTTCTACCCCCTCTCTGATTCTATCCCCTACCAAGTTTCTTGCTGATTCTTGATATCTTAGAATTGGTCAGATCAGAATGATTCCTCTGTTTCCGGTTATGGGAAGTTGTCCAGTTCACATTTTGGTGCTCATTTCTCGACTGATTGTTAAGTACTGCTACAAAAGAGGACTGTGAACACTCGTTGCACATACCAAATCAGACTTATTTGTTTTCATTGCATTCTGAGTGTCAATCTGACTGACCTAGGATACTGCTTTGTAATTTCTCTACGCTGTTAATTGGGATTTATTTCTCCAATGAGACTTTTCTTTCTTGTCCATAATATATGGAGTTTGTCCTTTTTTTTGTGCAGGCTCCATGATTTCAGCAAAAAGAAATTCAGTGCGAGAACTGTGCTGCTCTGTGACCAAGTATGTTTGCAATCTCATATATCATACTCACCAGTGTGAATTCTGATATTGATGTTGTTTTTCATGATTCATGTGTATCGTGTTATCATGATGCTTTTGAGCTGTTCCAATCATACATTGTTATTTGTCCAGTGTGGGAGGGAATTCCATATTGGTTGCCTGAAGGAACACAATATGGCTGATTTGACGGTGATATTCCTTGCCTGATATATATCAATAAGTTTTCAGCATAAACCAAGATCGATATTAATATGGGCTGTTGCAGGCCTTGCCTGAGGGAGCATGGTATTGTACTGCGGACTGCGTTAGGATCAGCGAGACACTGAAGGACTTACTTAGCCGTGGAGCAGAGCCTATTTCTTCTGTAGATGTAGAAATTATAAAGAGGAAATATGAACAGAAAGCTCTAAATAAAGATGGAGATCTTGATGTTAGATGGAGGGTTTTGAAGGACAAAAGTTCAGCAGACAGTAAATTGGTTCTCTCCAAAGCAGTTGCAATTTTCCATGTGAGTTCCATGGCTTGATACTGGGTGATAAGCACTTAGTGATTGTGTTGTCCTATAGTTGTTTTTTCATTTGTACAATTTTTAGTAAACTATGGGTAGGTTGTTGCAAAGAGTACATCAACTTATCAAAAGGATGGCATGTGTATTTTTAATTCATAACCTTGCAACTGACCTAGAAGTAGGGATAGTGACGTATGTTTGGTATGACATTATTAGTATCGGTTGCAATTTCCAACCTGTTTGGTATTTTGACACATAAAACGAACAATAATTACAAATTCTGCTTATTATATCTATATTCAGATGTCAAGCATGGAAAGTAAGAGTCGAAATTACGATGTGTGCGTGTCTGAACCAAGGCACTTCTCCTTTTATCCACAGCAGCTAATTACCTAATCTACTGTTCCACTTGGCACTTCTGCAGGAATCATTTGATCCCATTATCCAAATTGCTACTGGGCGAGACCTTATTCCAGCCATGGTTTACGGGTATGATGGACTACTGTCTACCTCATTTATGTATAATGCTGAAGACAAAAGTTTTAGACATAATAAAAAAACAAAAGTTATATGCTTCTATTTCCAGGAGGAGTGTAAGGGATCAAGATTACACAGGAATGCATTGTGCTGTATTAACTGTTGGGTAAACTTCTAGTACCTTTTTATAAAAAAAATAAATGGCATTGTCTATCAATTGGTTGCACATCTATAATTTAAGTTCTGTTGATGCAGCAACACTGTAGTATCTGCGGGTCTTTTCCGTGTTATGGGTAGTGAAATTGCGGAGCTACCCTTGGTTGCTACAAGTAGAGATAGTCAAGGCTTGGTAAGTTCGTATCTGTTTTTGTTTGAGAACTGAGATTATGAGATATGTGGGTATATATTATCAATCAAGTGGTAGTATTTCTTACCTATGTACTATGTGGCACCAAAGAAGTGCAAATTTGATTTTGAAGCTAGTGCATGGAGCCTGAACGAATTATCACTTTAGATCAGTGCATACACATACTTCGGATGTTATAGTGGACGCATCTACACCCTTTCCTTTTACACATATTTCAGTGCTATTAGATTTTTTTACTCCATCGGTGCATCCCTTAGCTCCCATCCCTTCATCCTAATTTGGCATTTCTATTATTTAAATAAAGAGTACATGATAGCAAATGAGAAAATAGAAAAGAAAACATAGCCTGTGTTAGGATTGTCAATGAGCCGAGCTCAACTGCTCAAGTGAGCTTACCCATCTAGGCTCTAGCTTGCCTGCTGAAAACAAAATGAGCTCCTAAACTTACCATGCCATGCACTGCACACCCGGCTTTCATGGGGAAAAATAATGAGCAACAATGCATTGACCCAGGCACACACTATGCCACACATGACATGCTGCTTTTGTTGGGAAGTTGTTGGATGGCTGGTCCATTGGACTAGCATGGTGCTCTGGACCAGGGTTCAAAATTTCAGTTTTGCTATTCCTATCGGGAGGCACCGATAGGACCGAAATGTCCAAAACTGCAGTCCGAAATAATTTGATTCTTTGAAAAAAAACTGGTCAATTTTGAAGTAAATTTGCTAAATTCACGAAAAAATTGAAAAATTCCAACAAATTTCGGGCGAAATAATTTCGTATTGAGGGGAGGGGGGGGGGGGGTCCGATGGACCCGAAATTTCGGAAATTTTGAACCCTGCTTTGGAATGGAAAATTTTAATGAGAGGGAAGGACCAAAGGCTGAGGCTTGCTGAGCTATCAAGCTCCGCTAGTAGGAACGCGAGCTCAGCATTCAGCTTGAGCCCAGTTTGAATCCTCGGCGAGTCAAGCTCGTGAACTAGGGGCTCCTTTGAATGAAAGGATCTATAGAGGAATTTCATAGGATTCAAATACTATAGAAAATTTTCCTATTTGGCCCTTTGATACAAAGGATTGGAACTTTTCAAATCCTATGAAATTCCTGTGGAATGTCAATTGCATGAAGATTTTGGAGGAAACTTAGCAAGAGTTTCAACTTCTTGAAAAAATTTCTCTGAGTCTCTCTCTCATCTAATTCCTATGTGTTTTCTCGTGGCCTAATCAAACGACCATTCCTATGTTTTGCAATCCTCTGTTTTGTACCTGCATTCCTATCGAAATCCTGTGTTTTCCCTATTTCTCCGTCTTTTAAATCTTGCTTTTCAAAGGAACCCTAAATAGCTTTTTCATGGCCCTAGCCTGTTTGCATTCACGAGAGCATGGCAGACATATTAACAAGCAAATTTCACAAAACCTTAGCTTTGTGATTTCACTGCCCTAGCCTGTGTGCATTCACGAGAACATGGAGAATATGCTAATTAGTAAAACATGTTGAAGTGCTATTATGGCTTCCTTAAAGTTGCACCCTTTTGTTTGCGCTTGAATTGACTTCTTTTTTGGTTGTATTGATGATTCTTTCTCCCTTGATGTCGCTGAACTGAACAGGGGTATTTCCAAGCGCTGTTTGGCTGCATAGAACGATTGTTGGCATCTCTGAAGGTGAAACATTTTGTGCTGCCAGCTGCAGATGAAGCGGAGTCTATCTGGACACAGCGGTTTGGATTCGTGAAGATAACCCAAGACGAGGTTGAAAAACGTTTTCATAGACTGTCACCGTGACGTGCGAGGCGTGTGTATCAATTGGGAGGTTGCACTGACAAATTTTGTGTTGTGCACTGCAGCTGCGTGAGTACCTCAAGGGTGGGCGAACAACCGTGTTCCAGGGAACATCAACCCTGCACAAGCTGGTCCCAAAATTGGATGGCTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA020496