Os11g0547000

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Revision as of 09:13, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os11g0547000| Description = Similar to FKF1| Version = NM_001074600.2 GI:297611975 GeneID:4350698| Length = 4842 bp| Definition = Oryza sativa ...")
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Gene Name

Os11g0547000

Description

Similar to FKF1

Version

NM_001074600.2 GI:297611975 GeneID:4350698

Length

4842 bp

Definition

Oryza sativa Japonica Group Os11g0547000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 11

Location

Chromosome 11:22051177..22056018

Sequence Coding Region

22051381..22052968,22055621..22055925

Expression

GEO Profiles:Os11g0547000

Genome Context

<gbrowseImage1> name=NC_008404:22051177..22056018 source=RiceChromosome11 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008404:22051177..22056018 source=RiceChromosome11 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtttgatgcgggggatcgcggcggaggcggcggggtggtggcggtgaagaggatgaagctgtgcgaggaggaggaggaggaggaggaggggatggaggtggatgaggaggaggaggaggtggggtgggtgtggaggccgccgggggggctagcgggggaggatgaggcggcggcgtgggaggggagggcggcggcgatcgtggtgtcggacgcggtggaggtggatttcccggtcatctacgtcaacgccgccttcgaggccgccacggggtaccgcgccgacgaggtcctcggccgcaactgccgattcttacaattccgggatccacgtgcccaaagacgacatccgcttgttgatcccatggttgtttcagagatccggcgatgcttgaatgagggaattgagttccaaggtgagctattgaattttcggaaggacggtgctccactgtacaacaggctaaggctcattccaatgcatggggatgatggttttgtgactcacgtcattggaatccagttgttctctgaagctaacattgatcttagcaatgtatcatatccagtgtataaacaacagtccaaccacagacccaacattcaagagatcaaccctgcttctcatgaacatattcctaagattcaaagttccgagtactgctgcatcctccagctctcagatgaagttctggcgcacaacatattgtctcgcttatcgccaagagatgttgcatccatcggatcagtctgcactagaatgcatgagttgaccaagaatgatcacctgagaaagatggtatgtcaaaacgcgtggggaagagacgtcactgtgaggcttgagatgagcaccaagatgttaggatggggtcgtcttgcaagagagcttacaacccttgaggcagcttcatggaggaagtttacagttggaggtcgtgttgagccttcccgttgcaacttcagtgcctgtgctgttggtaatcgccttgtcctgtttggaggtgaaggagtcaacatgcagccaatggatgatacctttgtgctcaacctggaatctgcaaagcctgaatggcgccgtgtcaaagtttcagcttctccacccggccggtgggggcacactctctcatggctgaatggctcatggctagtggtctttggaggctgtggacagcaaggtttgctcaatgatgtctttgtccttgaccttgatgccaagcagcccacctggagggaggttgcaagcgagggcccaccattgccgaggtcatggcacagttcatgtaccctggatggatcaaagcttgttgtctcaggggggtgcactgaatccggtgtgctcctcagtgacacattcctgcttgacctcaccaaggaaaaaccagcatggaaggagatcccaacatcctggtcaccaccatcccgcctcggccacaccttgtccgtctttggtaagaccaaactcttcatgtttggtgggttggcaaagagcggctctctccggctacgctcctgtgatgcctacactatggacgctggtgaagacagcccacaatggaggcaactggcgacaaccgggttcccgagcatcggtccacctccgaggctcgatcatgtcgcggtcagcctcccctgtggacggataatcatattcggtggctccatcgctgggctgcactcgccctcacagctgttcctcctcgacccagcggaggagaagccgacatggaggattttgaacgtccctggccagccacccaagttcgcctggggtcatagcacatgcgtggttggcggcaccagggttcttgtcctgggtggccacactggggaggagtggattctcaatgagctccatgagctgtgcctcgcgagcaggcccgacgaagatgagtga</cdnaseq>

Protein Sequence

<aaseq>MFDAGDRGGGGGVVAVKRMKLCEEEEEEEEGMEVDEEEEEVGWV WRPPGGLAGEDEAAAWEGRAAAIVVSDAVEVDFPVIYVNAAFEAATGYRADEVLGRNC RFLQFRDPRAQRRHPLVDPMVVSEIRRCLNEGIEFQGELLNFRKDGAPLYNRLRLIPM HGDDGFVTHVIGIQLFSEANIDLSNVSYPVYKQQSNHRPNIQEINPASHEHIPKIQSS EYCCILQLSDEVLAHNILSRLSPRDVASIGSVCTRMHELTKNDHLRKMVCQNAWGRDV TVRLEMSTKMLGWGRLARELTTLEAASWRKFTVGGRVEPSRCNFSACAVGNRLVLFGG EGVNMQPMDDTFVLNLESAKPEWRRVKVSASPPGRWGHTLSWLNGSWLVVFGGCGQQG LLNDVFVLDLDAKQPTWREVASEGPPLPRSWHSSCTLDGSKLVVSGGCTESGVLLSDT FLLDLTKEKPAWKEIPTSWSPPSRLGHTLSVFGKTKLFMFGGLAKSGSLRLRSCDAYT MDAGEDSPQWRQLATTGFPSIGPPPRLDHVAVSLPCGRIIIFGGSIAGLHSPSQLFLL DPAEEKPTWRILNVPGQPPKFAWGHSTCVVGGTRVLVLGGHTGEEWILNELHELCLAS RPDEDE</aaseq>

Gene Sequence

<dnaseqindica>3051..4638#94..398#accgtctcatcccagctcagctcagctctgcctccgccatttcgaagcacatcgaggagagagaaagttctagagagagaggagagaggagagatgtttgatgcgggggatcgcggcggaggcggcggggtggtggcggtgaagaggatgaagctgtgcgaggaggaggaggaggaggaggaggggatggaggtggatgaggaggaggaggaggtggggtgggtgtggaggccgccgggggggctagcgggggaggatgaggcggcggcgtgggaggggagggcggcggcgatcgtggtgtcggacgcggtggaggtggatttcccggtcatctacgtcaacgccgccttcgaggccgccacggggtaccgcgccgacgaggtcctcggccgcaactggtgagccctcgtgcgcgccctgctcttagctgttccccgatcgatgccgctctgctctgatctggtgtggttggatggggatggcgaaatgctgcttgttttttttttttggtgctctcgattcgattccagctcgatatgttggcgagattgatggtggttgtggatggctgtgttgttgaatttaatgagcttttgccgtgcagtcaaaccttgagattttaatgcgcatttgttagaattagggggttcctgtacaggcgtacggtgcagagtgcgcaccactctgtctctgccttaatgcttgcaattgcggcgatgatgcgtgattcctgactagttgctgtaaattttagcattttatcctcacttttgattggttgttttttttttttttgaaatttatagatgggtatcatgccagtatgagatttagccagaatttgaagtgtactgtttctgttagaccatctgtattttagagccaatctctgagtaatggtgacattgttgatttttaatctacacattaagcacagcacgagcaagccaacaatcgaagtaaattgtagataatgttgttcaagtacagtaaaagcctgaaaggtgcttacgcgatctagtttggatatattcatgttattgctaaatttatgaaatggcttttgaaacaaattttgtgtatggaagttctatatcgcatatttgcattggaccttagaggcgaacaacgaaatgttcatatattctttctggctctgggtcatttttgttttctggtgggaagaggctgggcaagcaagggtgatggctacccgttagatattttcccctgatatatcttctcttctcttgctctactaaagtagccacttgcacatagaaaaagggatgatggaagaataaactgtagcatatattgtgaatataaaatgagatgggtaggccattaattggaatatagcacagttgtctgtagcatgtgggtacaaaaatttacaacagggagcatcacggttttagccaggcctttttattttttaccaccgggctaccaattaatacttagtaactttagtcttccattggcatatatcatatttagtggtcgcctgctagtgctctaggaggatatattatactggattagtaagactttttcctcctctcttggatggtactggaaaataattaactatgaatgtattcacatgacaaattaacattgaatttggacaccaactgtgaaatttgatccgtattaacaatatggaaagctattattggtgacaaccttataagtgtactacagtactacacctgcaagggttttcagttgacaagtagctgattatggtcagtttcagaattcggaactcaattttgagcataaatggaagttctggatgtaatatgaagataaactttgagaaatttgacttgggttgtaaatgtttgaacttgattttcgtgctgtactgcttaaggctgtcttcaggaggcaaggtttacctcctgacacggaaaacaatgtaagcgattagagcgagattagttaagtactagcctaaaaaaaattaaaaaatggattaatatgattttttttaaagcaactttcctataggaaaattttgcaaagaacacaccgtttagcagtttgaaaagcgtgcgcgcagaaaacgagagatgtgagttgggaaagaaggggaaagtcttttagggactcattccgtaaatgtcgttttaccattttgtggtgatttgctctaatcgtccacgtcgaatggtaaatattcttgtgtgcagtctgcacaattagcctctcttttgtcagattatgaaaattcttgaaaaacaatttattgaattgcttacatgatgcaagaacttgtctcttatattacattttgacatatcatgccatcacaaacaattccaaacatattaattttatttccaaaagattcattggatgagtttagttaaacctgtgttccatcataagtactccctccttccctaaatgtttgacacggttgacttttttaaacatgtttgaccgttcgtcttattcaaaaacttttgtgaaatgtgtaaaactatatgtatacataaaagtatatttaacaataaatcaaatgataggaaaagaattaataattacttaaattttttgaataagacgaacggtcaaacatttttaaaaaagtcaacggcgtcaaacattttgggatggagggagtagtttggacattcagcaatcagcataagctctaggcattggctaacataattaagtattcaatgtagggttttttttttttttttgcatttcgactaaagtccaacaaagcataaaaaaaatagctggactagtttctgcctaatgtttagcaatgttagcaattagcactaggttaacagaatacatttgaaaccaaacaaaaagccacattcttcttcgttgtctgcgacaaagctaatagacaaatgcatgttctctatgcttgaattgctgttattctactatcatttttcatttatacgagttgttcaactgtatcatatttgcatcaagctaacagtgacataacttgacagagggcctagagaagcttctcacattactctgttgactcaaacttgtttcagccgattcttacaattccgggatccacgtgcccaaagacgacatccgcttgttgatcccatggttgtttcagagatccggcgatgcttgaatgagggaattgagttccaaggtgagctattgaattttcggaaggacggtgctccactgtacaacaggctaaggctcattccaatgcatggggatgatggttttgtgactcacgtcattggaatccagttgttctctgaagctaacattgatcttagcaatgtatcatatccagtgtataaacaacagtccaaccacagacccaacattcaagagatcaaccctgcttctcatgaacatattcctaagattcaaagttccgagtactgctgcatcctccagctctcagatgaagttctggcgcacaacatattgtctcgcttatcgccaagagatgttgcatccatcggatcagtctgcactagaatgcatgagttgaccaagaatgatcacctgagaaagatggtatgtcaaaacgcgtggggaagagacgtcactgtgaggcttgagatgagcaccaagatgttaggatggggtcgtcttgcaagagagcttacaacccttgaggcagcttcatggaggaagtttacagttggaggtcgtgttgagccttcccgttgcaacttcagtgcctgtgctgttggtaatcgccttgtcctgtttggaggtgaaggagtcaacatgcagccaatggatgatacctttgtgctcaacctggaatctgcaaagcctgaatggcgccgtgtcaaagtttcagcttctccacccggccggtgggggcacactctctcatggctgaatggctcatggctagtggtctttggaggctgtggacagcaaggtttgctcaatgatgtctttgtccttgaccttgatgccaagcagcccacctggagggaggttgcaagcgagggcccaccattgccgaggtcatggcacagttcatgtaccctggatggatcaaagcttgttgtctcaggggggtgcactgaatccggtgtgctcctcagtgacacattcctgcttgacctcaccaaggaaaaaccagcatggaaggagatcccaacatcctggtcaccaccatcccgcctcggccacaccttgtccgtctttggtaagaccaaactcttcatgtttggtgggttggcaaagagcggctctctccggctacgctcctgtgatgcctacactatggacgctggtgaagacagcccacaatggaggcaactggcgacaaccgggttcccgagcatcggtccacctccgaggctcgatcatgtcgcggtcagcctcccctgtggacggataatcatattcggtggctccatcgctgggctgcactcgccctcacagctgttcctcctcgacccagcggaggagaagccgacatggaggattttgaacgtccctggccagccacccaagttcgcctggggtcatagcacatgcgtggttggcggcaccagggttcttgtcctgggtggccacactggggaggagtggattctcaatgagctccatgagctgtgcctcgcgagcaggcccgacgaagatgagtgattcccaactccattgcttgttcttatttatttagatcctatgattattactgatatctgttgttgtcacaaccctatgtaatagtagtaaaaaagaaacaaaaagaggattactggtagttttcatccttagaagttaggaaaaagatctgaaaaaaaagttatgaaataaaggtttgttctagtttttttttttgttttcttc</dnaseqindica>

External Link(s)

NCBI Gene:Os11g0547000, RefSeq:Os11g0547000