BGIOSGA020522

From RiceWiki
Revision as of 12:47, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA020522| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA020522, complete gene.| tag = OsI_244...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA020522

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA020522, complete gene.

LocusTag

OsI_24486

Ensembl Transcript ID

BGIOSGA020522-TA

Ensembl Protein ID

BGIOSGA020522-PA

Length

2616

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:32274513..32277128

Sequence Coding Region

32276810..32277128,32276337..32276704,32275432..32275668,32274513..32274767

Genome Context

<gbrowseImage1> name=IndicaChromosome06:32274513..32277128 source=RiceIndica06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome06:32274513..32277128 source=RiceIndica06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGATAGTGACATTGATGAACTTGTTACGGGCATGCTGGAGACCATCATCCAACCAGCATGCCCGGGCAGGCTCAGATGTTGCCGGCAGGCAGGATGGACTTCTATGGTACAAGGACACTGGTCAGCATGTAAATGGGGAATTCTCTATGGCTGTGGTCCAGGCCAACAACTTACTTGAGGATCAGTGCCAGATTGAATCGGGTCCATTGAGCTTTCTTGACTCTGGTCCATACGGAACTTTCGTCGGGGTTTATGATGGACATGGTGGCCCAGAGACGGCTTGCTATATCAACGATCACCTATTCCACCATCTGAAAAGGTTTGCATCTGAACAGAATTCGATGTCTGCTGATGTGCTGAAGAAAGCATATGAAGCTACAGAAGATGGGTTCTTCTCTGTTGTCACTAAGCAATGGCCTGTGAAGCCTCAAATAGCTGCTGTTGGCTCGTGCTGCCTGGTTGGTGTAATCTGTGGTGGCATTCTTTATGTTGCTAATGTTGGGGATTCCCGTGTTGTTTTAGGCAGACATGTCAAAGCCACGGGAGAAGTTCTGGCTGTCCAACTCTCAGCAGAGCATAACGTAAGCATTGAGTCAGTGAGAAAAGAATTGCAGTCAATGCACCCGGAAGATAGGCATATTGTTGTTCTCAAGCACAACGTTTGGCGTGTAAAAGGTCTAATTCAGGTCTGCAGATCAATTGGTGATGCCTATCTCAAAAGATCAGAGTTCAACCGGGAACCTTTGTATGCAAAATTCCGCCTCCGGGAACCTTTTCACAAGCCCATACTAAGTTCAGAACCATCGATTAGTGTGCAACCCCTACAACCACATGATCAATTTCTCATATTTGCATCTGATGGTCTATGGGAGCACTTAACCAATCAAGAGGCCGTTGACATTGTTCACAGTAGCCCTCGCAATGGAAGTGCTAGGAGGCTCATAAAGGCAGCTTTGCAAGAAGCAGCCAAGAAAAGAGAAATGAGGTACTCAGATCTCAAGAAGATTGACCGTGGTGTTCGCCGCCACTTCCATGATGACATAACCGTCATAGTAGTCTTCCTCGACTCCAGCCTTGTCAGCAGGGCGAGCACCTACAGGGGCCCTTCTGTTTCTTTAAGAGGCGGCGGCGTGAATCTGCGTAGCAACACACTTGCACCTTATGCATCTCAAATGTAA</cdnaseq>

Protein Sequence

<aaseq>MIVTLMNLLRACWRPSSNQHARAGSDVAGRQDGLLWYKDTGQHVNGEFSMAVVQANNLLEDQCQIESGPLSFLDSGPYGTFVGVYDGHGGPETACYINDHLFHHLKRFASEQNSMSADVLKKAYEATEDGFFSVVTKQWPVKPQIAAVGSCCLVGVICGGILYVANVGDSRVVLGRHVKATGEVLAVQLSAEHNVSIESVRKELQSMHPEDRHIVVLKHNVWRVKGLIQVCRSIGDAYLKRSEFNREPLYAKFRLREPFHKPILSSEPSISVQPLQPHDQFLIFASDGLWEHLTNQEAVDIVHSSPRNGSARRLIKAALQEAAKKREMRYSDLKKIDRGVRRHFHDDITVIVVFLDSSLVSRASTYRGPSVSLRGGGVNLRSNTLAPYASQM</aaseq>

Gene Sequence

<dnaseqindica>1..319#425..792#1461..1697#2362..2616#ATGATAGTGACATTGATGAACTTGTTACGGGCATGCTGGAGACCATCATCCAACCAGCATGCCCGGGCAGGCTCAGATGTTGCCGGCAGGCAGGATGGACTTCTATGGTACAAGGACACTGGTCAGCATGTAAATGGGGAATTCTCTATGGCTGTGGTCCAGGCCAACAACTTACTTGAGGATCAGTGCCAGATTGAATCGGGTCCATTGAGCTTTCTTGACTCTGGTCCATACGGAACTTTCGTCGGGGTTTATGATGGACATGGTGGCCCAGAGACGGCTTGCTATATCAACGATCACCTATTCCACCATCTGAAAAGTAATTGATACTGACAGTATGCACTAGTGTTGTTTTGCACTACTTCCATACTGTGTTTTAGAGCAATTCCATGACCATTTCATTCTTCCATGGCTTATATTGCAGGGTTTGCATCTGAACAGAATTCGATGTCTGCTGATGTGCTGAAGAAAGCATATGAAGCTACAGAAGATGGGTTCTTCTCTGTTGTCACTAAGCAATGGCCTGTGAAGCCTCAAATAGCTGCTGTTGGCTCGTGCTGCCTGGTTGGTGTAATCTGTGGTGGCATTCTTTATGTTGCTAATGTTGGGGATTCCCGTGTTGTTTTAGGCAGACATGTCAAAGCCACGGGAGAAGTTCTGGCTGTCCAACTCTCAGCAGAGCATAACGTAAGCATTGAGTCAGTGAGAAAAGAATTGCAGTCAATGCACCCGGAAGATAGGCATATTGTTGTTCTCAAGCACAACGTTTGGCGTGTAAAAGGTCTAATTCAGGTGAGTTCTCTATCACTATGAACACAGTTTTAGCTTTGAAGAAGTTTGATTGAAGGATCATTTCATATTGCCTCCTGCATCTGCCATTATTCCCATCATCACCTTCCGGATGGTAATCGGCTTATTAAACTCATCTGCATTTGTAATGTTAAATGACAAAACCAAGTAGATTCGAGGTGGTTACACCATTGGAAATAAATGCAATAAAGTCTTCTTCTGCTCATGGATGAGAGATGTCATCTGTGATTGATGATTGTGATATCACTCCTATATTTTGTGCCAGTGAGGAGCTTGAGAATAATCGAAGGTTTTGCATTGTCTGTTGTTTAATTGCATGTTCATCTACTTAATTGAGAGATTTTTTTTTTCGTGGTACAGATAGCTGCTGGTTGAAGAAATACTTTGTTTGCTATTTATCTGTTAGGTTCATGCCATCCCTCAAATAACCATTTGTTAGTGAAAAACATTTTATGAATATCCCTCCAATCTCCACTCTTCAGAGCTTGATACACCCTTCACTAGGCTACCATGATAAGGCATCCAAATGTTTGATGAGTTTTTATTGTACAGTTTACAAATCTGGCAATACTTGCTGCTTTATTTATGTTTCTTCCAAGGTCTAAGTGAAGATTGTTGGGTTTTCCTTTAATTTGTTATATATTTTGCAGGTCTGCAGATCAATTGGTGATGCCTATCTCAAAAGATCAGAGTTCAACCGGGAACCTTTGTATGCAAAATTCCGCCTCCGGGAACCTTTTCACAAGCCCATACTAAGTTCAGAACCATCGATTAGTGTGCAACCCCTACAACCACATGATCAATTTCTCATATTTGCATCTGATGGTCTATGGGAGCACTTAACCAATCAAGAGGCCGTTGACATTGTTCACAGTAGCCCTCGCAATGTAAGTGCTTGCTCCTGCACAAATAAATTAACATGAAACATACAGATACATTGGTTGGCATTTTCCATTGCAACCATGCATGTCATTGGTTGACATATATTGCCAAATGCCAACATAAGAATTAGTGGTAGTTTACTACTACCATATTTCCTTGAGTTACTACCACATAGCTAATAAATTTTGTAGTCTCAGTGACATGATTTCTTATTGCAGCCAATCCAAAATCCTTTTGTATAGCAGCATTAAGACTAAATTGCGTAAAAGCCCAAGATGTTATTCTGAAGGTTTCAGAAAAACCCATGCACATAGCTTAAGCAATATTGCCTCTTGGAATGAAATATTAGCCTGTCACCAAAACAGCAATACAAAATATGAATATGGATGGTTCCCTTCAGTACAACAATTTGTTGCATGGCATTGGTTTATGTACATAGTCCTGGCATGGCTGCATATACAATAGAAAATAGACTCATGTGGATATATAAATCTATGATCAAGTAGAGCTGAAATTTGTAGCTACTTGCTGGCACAGAAGCTTAGCATCATTTACCTTGTTATTGTTCAGCCCTCAGTGGAAGGCAACATGCATGAAAACAAAATGGACACGCTAAGTGTTGATTGTGAAGTGAAAGAATCTGATGATTTGTGCTCTTTGATCTTTCAGGGAAGTGCTAGGAGGCTCATAAAGGCAGCTTTGCAAGAAGCAGCCAAGAAAAGAGAAATGAGGTACTCAGATCTCAAGAAGATTGACCGTGGTGTTCGCCGCCACTTCCATGATGACATAACCGTCATAGTAGTCTTCCTCGACTCCAGCCTTGTCAGCAGGGCGAGCACCTACAGGGGCCCTTCTGTTTCTTTAAGAGGCGGCGGCGTGAATCTGCGTAGCAACACACTTGCACCTTATGCATCTCAAATGTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA020522