BGIOSGA020525

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Revision as of 12:47, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA020525| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA020525, complete gene.| tag = P0481E0...")
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Gene Name

BGIOSGA020525

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA020525, complete gene.

LocusTag

P0481E08.41

Ensembl Transcript ID

BGIOSGA020525-TA

Ensembl Protein ID

BGIOSGA020525-PA

Length

2691

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:32170336..32173026

Sequence Coding Region

32172209..32173026,32171602..32171768,32170722..32170806,32170336..32170525

Genome Context

<gbrowseImage1> name=IndicaChromosome06:32170336..32173026 source=RiceIndica06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome06:32170336..32173026 source=RiceIndica06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCTTCCTACTGCTACTACGGCAACACCTCCAGCCCTAACCCTAACCCTAACCCTAGCCCGGCTCCCTCCGCTCCGCCGCTCTACCCCACGCTCAGCATGGCCGATCTCGCGCCCGTCCAGATAGGCCCCTCCTCCCCCTCGTCGCCGATGTCCCCGGCGTCTCCGGCCACCCCCGTCGACGCCTACGCCAATGCCCCGCCACCGTCGGAGGACGTCCTGCTCCGGATCCCGGGGGCGCAGCTCCACCTCATCGACCGCCACCGCAGCTACCCGCTCGCCGCCGGCGACCTCTCGCTGCTCCGCATCCGCTCCGGCGACACCTCCCTCGCCGCCATCGCGCTCCTCCACCCCATCCAGTGGCCGCTCGCGCGCGACGTCGCCTCGGTGAAGCTCGACCCCTGCCACTACTCCTTCTCCCTCACCGTGCCGCCCTCCGCCGACGACCCCAACCCCGGCCCTCTCCATTACGGCCTCACGCTCTCCCACCCCGACCCGCGCCTCGATGGCATCCTCGCCACGTACACCAGCTTCTCCGTCCAGTCCGTGGTCGGCGGCGGGGCGTTGGCGAGCAAGGTTCGCGACGAGGTGGAGGCGGCGGCGTACTGGACGGCGGTGGCGCCCAATGTGGAGGAGTACGGCGGGAAGGTGGCAAATGCGATCGCGACGGGGGCCGGGCACCTGGCCAAGGGGATTCTGTGGTGCAGTGAACTGACGGTGGACAGGCTCCGGTGGGGAAACGAGGTCCTCAAGAGGAGGATGCAGCCCGGCGACGCCGACGCCGAGGTCAGCCCCGAGATGTTGAGGCGGATCAAAAGGGTCAAGATGGTGACAAAAATGTCTGAGAAAGTGGCAACTGGAATACTATCCGGAGTTGTAAAGGTTACTGGCTATTTTACAAACTCAATAGCTAACTCAAAAGCTGGCAAGAAGTTCTTTAATTTGTTACCTGGAGAGATTGTTCTTGCTTCGCTTGATGGATTCGGGAAGATTTGCGACGCAGTCGAAGTGGCTGGAACGAATGTTCTGTCCACATCATCAACTGTGACTACCGGTCTTGTATCCCACAAATATGGGGAGAAAGCTGCGGCTGCGACCAATGAAGGGATGGATGCAGCAGGCCACGCAATCGGGACAGCATGGGCAGTGTTCAAGATTCGGCAGGCCTTGAACCCGAAGAGCGTCCTAAAGCCAACCTCACTCGCCAAGTCTACCATCAAAGCAGCAGCTGCTGACTATCGTGCAAAGCAAAAGAAATAG</cdnaseq>

Protein Sequence

<aaseq>MASYCYYGNTSSPNPNPNPSPAPSAPPLYPTLSMADLAPVQIGPSSPSSPMSPASPATPVDAYANAPPPSEDVLLRIPGAQLHLIDRHRSYPLAAGDLSLLRIRSGDTSLAAIALLHPIQWPLARDVASVKLDPCHYSFSLTVPPSADDPNPGPLHYGLTLSHPDPRLDGILATYTSFSVQSVVGGGALASKVRDEVEAAAYWTAVAPNVEEYGGKVANAIATGAGHLAKGILWCSELTVDRLRWGNEVLKRRMQPGDADAEVSPEMLRRIKRVKMVTKMSEKVATGILSGVVKVTGYFTNSIANSKAGKKFFNLLPGEIVLASLDGFGKICDAVEVAGTNVLSTSSTVTTGLVSHKYGEKAAAATNEGMDAAGHAIGTAWAVFKIRQALNPKSVLKPTSLAKSTIKAAAADYRAKQKK</aaseq>

Gene Sequence

<dnaseqindica>1..818#1259..1425#2221..2305#2502..2691#ATGGCTTCCTACTGCTACTACGGCAACACCTCCAGCCCTAACCCTAACCCTAACCCTAGCCCGGCTCCCTCCGCTCCGCCGCTCTACCCCACGCTCAGCATGGCCGATCTCGCGCCCGTCCAGATAGGCCCCTCCTCCCCCTCGTCGCCGATGTCCCCGGCGTCTCCGGCCACCCCCGTCGACGCCTACGCCAATGCCCCGCCACCGTCGGAGGACGTCCTGCTCCGGATCCCGGGGGCGCAGCTCCACCTCATCGACCGCCACCGCAGCTACCCGCTCGCCGCCGGCGACCTCTCGCTGCTCCGCATCCGCTCCGGCGACACCTCCCTCGCCGCCATCGCGCTCCTCCACCCCATCCAGTGGCCGCTCGCGCGCGACGTCGCCTCGGTGAAGCTCGACCCCTGCCACTACTCCTTCTCCCTCACCGTGCCGCCCTCCGCCGACGACCCCAACCCCGGCCCTCTCCATTACGGCCTCACGCTCTCCCACCCCGACCCGCGCCTCGATGGCATCCTCGCCACGTACACCAGCTTCTCCGTCCAGTCCGTGGTCGGCGGCGGGGCGTTGGCGAGCAAGGTTCGCGACGAGGTGGAGGCGGCGGCGTACTGGACGGCGGTGGCGCCCAATGTGGAGGAGTACGGCGGGAAGGTGGCAAATGCGATCGCGACGGGGGCCGGGCACCTGGCCAAGGGGATTCTGTGGTGCAGTGAACTGACGGTGGACAGGCTCCGGTGGGGAAACGAGGTCCTCAAGAGGAGGATGCAGCCCGGCGACGCCGACGCCGAGGTCAGCCCCGAGATGTTGAGGCGGATCAAAAGGTAGTAACTCTATCTCACATTTTAGTTGTAATTGTGATTTGAATTAACCGATGTCAACCAAATTTATCCAGTATGATTTGGGATTTAGTTATCAGGGCATGAATGCAGTTTCAGGCTTTCAGTTCTCCATGGTTCATTAGTTTACAACTTTACATTGCTAAAGTGTGATAGTATTACCATTTCTGTATGTCTATCCAAAAAGGATGATACAATGTGCCTTCATTGTGTTTCTCTTTTATTTAAAGATTTTTGCTGGGTTACAAAACCATTTAAATAAATAGGTATGCTCCCTGCTTATTATTATTGCCATCACACCGACATCATGTTAGATTTGGATGGTTTTAGTGTCTATGAGAATAGACGTTGCAGGGAGATATTGTGTTAAATCAAGCATTAACAATTTTCCGCTTCAAGGAATTCATGCTTGTGATTGTTGCCAGGGTCAAGATGGTGACAAAAATGTCTGAGAAAGTGGCAACTGGAATACTATCCGGAGTTGTAAAGGTTACTGGCTATTTTACAAACTCAATAGCTAACTCAAAAGCTGGCAAGAAGTTCTTTAATTTGTTACCTGGAGAGATTGTTCTTGCTTCGCTTGATGGATTCGGTATGATTCTTTAACTTTTCTATTGTATCTGGTTAGTGTTACATAATGGGTCTGCTTGGCATTATTGTTTTTTTTAATGGTATAATGAGTGTTGATATGTTTGCTTTATTCAGACATGAAACCTGGTTTCATAATTTAATAAATTTATGTTATTCTTAAACTCACCTAGACAACACCTGTGTCATGACTCATGAGCAGATTGTTTTTCTGTTTCTAATTTGAATATCCCTGTGGGTTGCATTATATAAGTCATAATTATCTGACGTAGGTCAGGCTTTGCTTGGGTTTTTTGGTCGCATATATCCTGTGAATTTGCATAACTTGATGGATACAAATTTTTGCCAAATCTGAAGTTAGCATAAGAAGCATATACTCTGGTGACTTAAATTTGGAATGAAATAATGGCTTGCAATTCTTTTTCTTGGCTCTCCATTTCCTCTGTTTAATTTGGCATGCTCCTTCTGGATCAGCTCATATTAAATCAGCTGCTGCCACTTTGTACTTCCAACCACTGATTATGCTATTTTTCATTTCTGATGCTGGTTGACCTTAGCTCAACATGTTAGATACATTTAGGGACATATTCTGTTTGCCGCCGTGCTTTCCGATGAAATAGTACTTTATATCTCTTATGCGATATATCTACTTCAGTATAACAGTTAACAAAATATACAGATTTACCCGAACACATTCTTTGAAGCAGTAATTTCTTATGGTAATTTGGCTCGTTGGAGCTAATCACTTTGGATTATGGTAACATTGTCTTTCTTACATATCGTTAATTCATGCCAACAGGGAAGATTTGCGACGCAGTCGAAGTGGCTGGAACGAATGTTCTGTCCACATCATCAACTGTGACTACCGGTCTTGTATCCCACAAGTACGAGTTATTCTCCTTTCCACTCATTTCTCCTCTCTTTATATGTAGATTTCTACTACTTCTTACGTGTCCTACATCCATATCTGAAGCACATCATATGCACATCCTTTTTCTCTAATTCTTCCTTATGTAGTGGAATTGATCAAATGATCAATAGAGATTCTTCTTAAGCTCTTACATTGGGTCTGCTCTGCAGATATGGGGAGAAAGCTGCGGCTGCGACCAATGAAGGGATGGATGCAGCAGGCCACGCAATCGGGACAGCATGGGCAGTGTTCAAGATTCGGCAGGCCTTGAACCCGAAGAGCGTCCTAAAGCCAACCTCACTCGCCAAGTCTACCATCAAAGCAGCAGCTGCTGACTATCGTGCAAAGCAAAAGAAATAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA020525