BGIOSGA020527

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Revision as of 12:47, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA020527| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA020527, complete gene.| tag = P0481E0...")
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Gene Name

BGIOSGA020527

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA020527, complete gene.

LocusTag

P0481E08.35

Ensembl Transcript ID

BGIOSGA020527-TA

Ensembl Protein ID

BGIOSGA020527-PA

Length

5668

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:32155836..32161503

Sequence Coding Region

32161402..32161503,32161050..32161092,32160616..32160736,32160377..32160530,32159751..32159831
,32159548..32159659,32159274..32159400,32159021..32159159,32158459..32158585
,32158189..32158370,32157873..32158088,32157625..32157790,32157410..32157548
,32157177..32157327,32156192..32156596,32155836..32156084

Genome Context

<gbrowseImage1> name=IndicaChromosome06:32155836..32161503 source=RiceIndica06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome06:32155836..32161503 source=RiceIndica06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGCGCAAGTGGGCGCTCTCCTCCGCGCTCCTCCTCCTCCTCCTCCTCACCACACTCCCCGATCCAGGCATGTCTCTGTCTGCCCCCGCCGCCGGAGGCGTTATCTCGCTTGTTGGGTTCGCGGCCACTTCGATCTGTTGTAATGCTAAGAAGCTCCAAGTCAATGCTGATGACAGCACTGATGAGTTAGTTGATCCGCCGAAGGTAGAGGAGAAGATTGGTGGTGTTCCCCATGGCCTGTCCACGGACTCTGAGGTTGTTCAGAGGGAGGCTGAGTCAATCTCGAGGAAGACCCTCAGGAGCTCAGCGGAGAAATTTGAGTTCCAGGCTGAGGTGTCCAGACTCATGGACATCATCATCAACTCACTCTACAGCAACAAGGACATTTTCCTGAGGGAGCTCATCTCCAATGCTTCTGATGCTTTGGACAAGATTAGGTTCCTGGCTCTCACTGATAAGGAGGTTTTGGGCGAAGGTGACACTGCTAAGCTTGAAATCCAGATTAAGCTGGATAAGGAGAAGAAGATTCTCTCCATTCGGGATAGGGGTATTGGTATGACCAAGGAAGATCTCATTAAGAACCTTGGGACCATTGCCAAATCTGGAACTTCAGCTTTTGTGGAAAAGATGCAGACTGGGGGTGACCTCAATCTCATTGGGCAATTCGGTGTTGGTTTCTATTCAGTATACTTGGTTGCTGACTATGTTGAAGTGATCAGCAAGCACAATGACGACAAACAGCACGTCTGGGAGTCCAAAGCTGATGGATCATTCGCTATCTCTGAGGATACATGGAATGAACCCCTGGGCCGTGGAACTGAAATAAGACTGCACCTCCGAGATGAAGCCAAGGAGTACGTGGAAGAAGACAAGCTAAAGGATTTGGTGAAGAAGTACTCTGAGTTCATCAATTTCCCCATTTACTTGTGGGCAACCAAGGAGGTTGATGTGGAAGTGCCAGCTGATGAGGATGAGTCAAGTGAATCAAGTGAAGAAGAGGAATCATCCCCTGAGTCTACAGAGGAAGAAGAGACAGAAGAGAGTGAAGAGAAGAAGCCCAAGACAAAGACAGTAAAGGAAACCACTACTGAGTGGGAGCTTCTGAATGATGTGAAGGCTATATGGCTTCGTAGCCCTAAGGAGGTTACTGAAGAAGAATACACAAAGTTTTACCACTCACTTGCTAAGGACTTTGGTGATGACAAGCCCTTGTCTTGGAGCCACTTCACTGCTGAGGGAGATGTTGAGTTCAAAGCTTTGCTCTTTGTTCCTCCCAAGGCTCCACATGATCTCTATGAGAGTTACTACAACTCTAACAAGTCAAACCTTAAGTTGTATGTTAGAAGGGTTTTCATCTCTGATGAATTTGATGAGCTTCTTCCGAAGTATCTCAGCTTTTTGAAGGGTCTCGTCGACTCGGACACATTGCCTCTCAATGTATCACGAGAAATGCTCCAACAACATAGCAGCCTGAAGACCATCAAGAAGAAACTAATCCGCAAAGCTCTTGACATGATTAGAAAACTTGCTGAGGAAGATCCTGATGAGTACAGCAACAAAGATAAGACAGATGAAGAAAAAAGTGCAATGGAGGAGAAAAAGGGCCAGTATGCCAAGTTCTGGAATGAGTTTGGAAAATCAGTCAAGTTGGGCATCATTGAAGACGCAACTAACAGGAACCGTCTTGCAAAGCTTCTGAGATTTGAAAGTACCAAGTCGGAAGGCAAACTTGCCTCTCTTGATGAGTACATTTCAAGGATGAAGCCAGGGCAGAAGGACATCTTTTACATTACCGGAAGCAGCAAGGAACAATTAGAGAAATCACCGTTCCTTGAGAGGCTAACCAAAAAGAACTACGAGGTTATCTACTTCACTGACCCTGTTGACGAGTACTTGATGCAATACCTCATGGACTACGAGGACAAGAAGTTCCAGAACGTCTCCAAGGAGGGTCTCAAACTCGGCAAGGACTCTAAGCTCAAGGACCTCAAGGAGTCCTTCAAGGAGCTGACCGACTGGTGGAAGAAGGCTCTTGACACCGAGAGCGTGGACTCGGTGAAGATCAGCAACCGGCTGAGCGACACCCCCTGCGTGGTGGTGACATCCAAGTACGGGTGGAGCGCCAACATGGAGAAGATCATGCAGTCACAGACCCTCTCGGATGCCAGCAAGCAGGCGTACATGCGCGGCAAGAGGGTACTCGAGATCAACCCCAGGCACCCCATCATCAAGGAACTCCGTGACAAGGTCGCCCAGGACAGCGAGAGCGAGAGCTTGAAGCAGACGGCGAAGCTGGTGTACCAGACGGCCCTCATGGAGAGCGGCTTCAACCTTCCTGATCCCAAGGACTTCGCCTCCAGCATCTACAGGTCGGTGCAGAAGAGCCTTGACCTGAGCCCCGACGCGGCCGTGGAAGAGGAAGAGGAGGTCGAGGAGGCCGAGGTTGAAGAGAAGGAATCATCCAACATCAAGGAGGAGGCGGAGCCGTCGTCGTATGATAAGGACGAGCTGTAG</cdnaseq>

Protein Sequence

<aaseq>MRKWALSSALLLLLLLTTLPDPGMSLSAPAAGGVISLVGFAATSICCNAKKLQVNADDSTDELVDPPKVEEKIGGVPHGLSTDSEVVQREAESISRKTLRSSAEKFEFQAEVSRLMDIIINSLYSNKDIFLRELISNASDALDKIRFLALTDKEVLGEGDTAKLEIQIKLDKEKKILSIRDRGIGMTKEDLIKNLGTIAKSGTSAFVEKMQTGGDLNLIGQFGVGFYSVYLVADYVEVISKHNDDKQHVWESKADGSFAISEDTWNEPLGRGTEIRLHLRDEAKEYVEEDKLKDLVKKYSEFINFPIYLWATKEVDVEVPADEDESSESSEEEESSPESTEEEETEESEEKKPKTKTVKETTTEWELLNDVKAIWLRSPKEVTEEEYTKFYHSLAKDFGDDKPLSWSHFTAEGDVEFKALLFVPPKAPHDLYESYYNSNKSNLKLYVRRVFISDEFDELLPKYLSFLKGLVDSDTLPLNVSREMLQQHSSLKTIKKKLIRKALDMIRKLAEEDPDEYSNKDKTDEEKSAMEEKKGQYAKFWNEFGKSVKLGIIEDATNRNRLAKLLRFESTKSEGKLASLDEYISRMKPGQKDIFYITGSSKEQLEKSPFLERLTKKNYEVIYFTDPVDEYLMQYLMDYEDKKFQNVSKEGLKLGKDSKLKDLKESFKELTDWWKKALDTESVDSVKISNRLSDTPCVVVTSKYGWSANMEKIMQSQTLSDASKQAYMRGKRVLEINPRHPIIKELRDKVAQDSESESLKQTAKLVYQTALMESGFNLPDPKDFASSIYRSVQKSLDLSPDAAVEEEEEVEEAEVEEKESSNIKEEAEPSSYDKDEL</aaseq>

Gene Sequence

<dnaseqindica>1..102#412..454#768..888#974..1127#1673..1753#1845..1956#2104..2230#2345..2483#2919..3045#3134..3315#3416..3631#3714..3879#3956..4094#4177..4327#4908..5312#5420..5668#ATGCGCAAGTGGGCGCTCTCCTCCGCGCTCCTCCTCCTCCTCCTCCTCACCACACTCCCCGATCCAGGCATGTCTCTGTCTGCCCCCGCCGCCGGAGGCGTTGTCTGATTTTTCGCGATTTTTTGGGTGTTTTTCTGTGGGAGTATAGTGAATTTTAGGTTGGAACTCTGTGATCCGTTAGCTCCGGAGGCGACCAGTACAGATTCGATCTCACTTGGTCACCCTTTGATTGACTCTGCTGTGATTATTTGGTGCCACTACTTCGAGTAAGGGAGTGAGATGTGATGACTGATGAATTGGTAGTTTTTTTTTTTTTGAAATAGTGCTCATAGTTGTCTGATCCGTTTGTGTGGACGTGACTTGTGCTTTGTGCGATCTCTGGTGGTGATTCTAGTCTGATTTTTGTTTTAGATCTCGCTTGTTGGGTTCGCGGCCACTTCGATCTGTTGTAATGGTAGGGTTTATTGCGATTTCGAGATTTAGCTAGTTCTAGATCCGTAATCTGCTATTGCGCACCGTAATTTTGTCCGCAATAGGGCTCATTATATGCGGGGTTTAAATAGGGTTTAGTCCTGAGAGTAATAATACATCTGTATCAAGTCAGTTCAGTGTAAATCTAGTGCTGATTGTTGTTGATCTAGCGCCCCCAACTTACTGATCTTAGTGATTTTTAAAGGCTTCTCAAGTCTAATTCACACACATTGCTCTACCGCAAGTCAACACATGATTCAAATTATTATTCGGTTCTGACCCTTCCTGTACTGCAGCTAAGAAGCTCCAAGTCAATGCTGATGACAGCACTGATGAGTTAGTTGATCCGCCGAAGGTAGAGGAGAAGATTGGTGGTGTTCCCCATGGCCTGTCCACGGACTCTGAGGTTGTTCAGAGGTGTGCACGATCTTCTGATCAATGCTGATCGTTTCCATCTTATTGTGTTGTTGATATCTGTATGAGCAATATGGAATGTGTGCAGGGAGGCTGAGTCAATCTCGAGGAAGACCCTCAGGAGCTCAGCGGAGAAATTTGAGTTCCAGGCTGAGGTGTCCAGACTCATGGACATCATCATCAACTCACTCTACAGCAACAAGGACATTTTCCTGAGGGAGCTCATCTCCAATGCTTCTGATGTATGTAGTTGTATTGCATTTTGACTCCCTTTTTAGGGCCTATTCGGAACACAGGAAAAGGAAAAACACAGGATAGGAAAAACGTAGGAATATGAAAGGAAATCACGTTGAAAACATAGGATTGAAAAACGCAGGAATATAAAAGTTGAGAGCATTCGGTTTACAGGAAAGGAAATAAAAAGTAATCGAGGAGTAATCTGTATACTGTATTTATTATCTACCGCTATCTTGCTTATCCCGTCTGTCTTGCTTATTATCTAGTGGCTGTTTTATTGCTTGATTGGCTTGATTCTGTCAAAGGGAATGAAACAAGAGATTGGAGTGGATGGAATTTTCCTCCGTTTTTCCTGTGGAATCAGCAGCAAAGGATTTTTTCCTACAGTTTTCCCATAACCACTTTTTACGATCCGAACGATAGGATAGGAAAAAATCCCATGTGAACAGTATTCCTATGAAATTCCCGGGAAAAGCCTCCAATCTGAATGAGCCCTAAGGTTATTAGTAGATGCTAGGAATTTAATGTGTGCTTTTTTTTTTATGTGTAGGCTTTGGACAAGATTAGGTTCCTGGCTCTCACTGATAAGGAGGTTTTGGGCGAAGGTGACACTGCTAAGCTTGAAATCCAGGTATATTAAACTTCGTAGCTGATAGTCTTTTTTGTGTGGTATATCTTGCTTTGGAAATTGACTTCATGGCATCTGCTGTGGGCACGTGTAGATTAAGCTGGATAAGGAGAAGAAGATTCTCTCCATTCGGGATAGGGGTATTGGTATGACCAAGGAAGATCTCATTAAGAACCTTGGGACCATTGCCAAATCTGGAACTTCAGGTATTACTCCTTTGTACTGATTTCTCTTAAAGTTATGTGTATTCTCTTGCTAAAACTTTAGTATTATCTATTTGTTTGTAAAGAGAATTTTACCAAGTGCCATTTAACTTAAACTTGAGTGATACCAATTCCTTGAAATTTTTGCAGCTTTTGTGGAAAAGATGCAGACTGGGGGTGACCTCAATCTCATTGGGCAATTCGGTGTTGGTTTCTATTCAGTATACTTGGTTGCTGACTATGTTGAAGTGATCAGCAAGCACAATGACGACAAACAGTAAGACACCACTGAAATACAGCGGCTACATATTGTGTTTTTGGTTCATCTTCTTTTCCTTCACTGGCATGACAACCTACTTCATGTTCTGCTGTTGCACTTTTTCTCTGATAGGCACGTCTGGGAGTCCAAAGCTGATGGATCATTCGCTATCTCTGAGGATACATGGAATGAACCCCTGGGCCGTGGAACTGAAATAAGACTGCACCTCCGAGATGAAGCCAAGGAGTACGTGGAAGAAGACAAGCTAAAGGTATTACCATCATTACTGTCAATTGGCTTCATGCTGTGACATCAAATATGCGATATGCACATGATAGTGGTACTTGGTGTCTGCATTGTCTCTGTGCTTTATGCTTGTCACCTCGGAATGTGGATGTAGCTTTGCTGCAAGCTTCGGATAGGAATTGTCATTTCGCTTGTTTGCATATATGGCTTATGGTTAGGGTTGTTCAACAGCTTTTTTAGCATGAATTGCTGCCTTTGGTTGAAACCTAGTCTGTATAACTAGTAGGGACAAGAGACCTTTTCATTAGCCCTGAATGTCATTGCTTACAAGGAAGTTTAGCATTACCTTTTTGTAAATTCATTTCGCTGCATAGTCTGGCAAATTTCTGTTGAATAGCTGCTATTGAGACATTATACAAAGAAAATAACTTACTATCTTGAACATTTCATGGTCTTGCAGGATTTGGTGAAGAAGTACTCTGAGTTCATCAATTTCCCCATTTACTTGTGGGCAACCAAGGAGGTTGATGTGGAAGTGCCAGCTGATGAGGATGAGTCAAGTGAATCAAGTGAAGAAGAGGAATCATGTAAGTTTTCAGTCTATGTTTTTATATCTTTTAGATGATACGTAAGTTATTTGCACATAAGTGCTAACATATTAGCTTTTCTTGGCAGCCCCTGAGTCTACAGAGGAAGAAGAGACAGAAGAGAGTGAAGAGAAGAAGCCCAAGACAAAGACAGTAAAGGAAACCACTACTGAGTGGGAGCTTCTGAATGATGTGAAGGCTATATGGCTTCGTAGCCCTAAGGAGGTTACTGAAGAAGAATACACAAAGTTTTACCACTCACTTGCTAAGGTACACAGACTGCAGTGATGAATTTACAGGAGCATAACATTTTATGTAAGCCTTGCAGAAGAAAGCAAGTAACCTCATTTAATATCAAATTATTTTGTAGGACTTTGGTGATGACAAGCCCTTGTCTTGGAGCCACTTCACTGCTGAGGGAGATGTTGAGTTCAAAGCTTTGCTCTTTGTTCCTCCCAAGGCTCCACATGATCTCTATGAGAGTTACTACAACTCTAACAAGTCAAACCTTAAGTTGTATGTTAGAAGGGTTTTCATCTCTGATGAATTTGATGAGCTTCTTCCGAAGTATCTCAGCTTTTTGAAGGTACTAGATTACTATTTCATGAACGACACGGTATTCCATTCATTGACTTATGCAGCCTAAACCTATAAGCTATTATCTGTAGGGTCTCGTCGACTCGGACACATTGCCTCTCAATGTATCACGAGAAATGCTCCAACAACATAGCAGCCTGAAGACCATCAAGAAGAAACTAATCCGCAAAGCTCTTGACATGATTAGAAAACTTGCTGAGGAAGATCCTGATGAGTACAGCAACAAAGATAAGACAGGTAACAAGTTCTCTGTGGATCACAGGTCATATACTGTTATTTATGATGTAATTCTCACATAATCTTCTGTACTCAGATGAAGAAAAAAGTGCAATGGAGGAGAAAAAGGGCCAGTATGCCAAGTTCTGGAATGAGTTTGGAAAATCAGTCAAGTTGGGCATCATTGAAGACGCAACTAACAGGAACCGTCTTGCAAAGCTTCTGAGATTTGAAAGGTTTGTCTTCTATTCTAATGTCCACTAATTGCTGTAGTTATATATGCGAGGGATAATAGAACTGAGTTTTTATCTGTTTCAGTACCAAGTCGGAAGGCAAACTTGCCTCTCTTGATGAGTACATTTCAAGGATGAAGCCAGGGCAGAAGGACATCTTTTACATTACCGGAAGCAGCAAGGAACAATTAGAGAAATCACCGTTCCTTGAGAGGCTAACCAAAAAGAACTACGAGGTGTGTTACCGAGAGGCCTCATTTTTTTACAGTATCTTATGTCATGCATTCTATGTTTTTTTTTTTTTTGAAAAGAATGTATTCTATGGTTTCTCCTTATGGTTTTTAATATTACACATTCATCGCATTGTTGTACTGTGGTATTTCTACTCATGTCTATTTACTCCCTCAAAAATAAGTAGGTTGATTTCTGGAATTGTTAGGCTTAGTGTTAGATTTACCCATTCAAGATTGCATAGGTCTATATGCCAAAGATTTTTGACTCAGGAATCATGAATCTAATGGACCATAACCCTGCACCGAGGTCACTGTACTATGTTTCAATACGTGTAATGGTACATATTATTTCTGATGTACCTTAGTTTTACCATCCTCTATATCGTTGATAAACCTCCACACTCCTCCGCTTTTAACCTAAAAATTGCTATGTAGTATGAATGAAGGTAAAATCACAGGTTTGCAGAACTTCATTCAGAAGCCGGGTACTGCACCACATTTATTGCTTTTTTATGAGCTCCTCCAATAGAATTACTCTGGATCCTTGGAGCTTAACTAATACTTTTGTTATCTTTTGTTGCAGGTTATCTACTTCACTGACCCTGTTGACGAGTACTTGATGCAATACCTCATGGACTACGAGGACAAGAAGTTCCAGAACGTCTCCAAGGAGGGTCTCAAACTCGGCAAGGACTCTAAGCTCAAGGACCTCAAGGAGTCCTTCAAGGAGCTGACCGACTGGTGGAAGAAGGCTCTTGACACCGAGAGCGTGGACTCGGTGAAGATCAGCAACCGGCTGAGCGACACCCCCTGCGTGGTGGTGACATCCAAGTACGGGTGGAGCGCCAACATGGAGAAGATCATGCAGTCACAGACCCTCTCGGATGCCAGCAAGCAGGCGTACATGCGCGGCAAGAGGGTACTCGAGATCAACCCCAGGCACCCCATCATCAAGGAACTCCGTGACAAGGTCGCCCAGGACAGCGAGGTACTGAAGCTTATTAGATCGACAAAAACCTCACTAATATTTATCATTTCTTTGCTTCCAAATACGTCGAAAAAAAAAACTTATGGTTTTGTGCAATCTTGATGCAGAGCGAGAGCTTGAAGCAGACGGCGAAGCTGGTGTACCAGACGGCCCTCATGGAGAGCGGCTTCAACCTTCCTGATCCCAAGGACTTCGCCTCCAGCATCTACAGGTCGGTGCAGAAGAGCCTTGACCTGAGCCCCGACGCGGCCGTGGAAGAGGAAGAGGAGGTCGAGGAGGCCGAGGTTGAAGAGAAGGAATCATCCAACATCAAGGAGGAGGCGGAGCCGTCGTCGTATGATAAGGACGAGCTGTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA020527