BGIOSGA020544

From RiceWiki
Revision as of 12:47, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA020544| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA020544, complete gene.| tag = P0712G0...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA020544

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA020544, complete gene.

LocusTag

P0712G01.11

Ensembl Transcript ID

BGIOSGA020544-TA

Ensembl Protein ID

BGIOSGA020544-PA

Length

1735

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:31981237..31982971

Sequence Coding Region

31982630..31982971,31982178..31982284,31981237..31981978

Genome Context

<gbrowseImage1> name=IndicaChromosome06:31981237..31982971 source=RiceIndica06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome06:31981237..31982971 source=RiceIndica06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGTCACCGCCGGCCGCCGCCCACCTCGCCACCGCCTCCGATCCCGACGAGGACCTCTGCTTCACCACCGAATCGGTCGCGCCCGCGGAGGAGATCGCCCCGCCCTTGCCCGCCCCTCCGCCGCCGGTGTCCGCGGAGGAGAGGGTGGAGCGCGCGTGGGCGCACTGGAGGCGGCTGGGCTCCCCGAAGATGGTGGTGGCGCCCATGGTGGACAACTCGGAGCTCCCCTTCCGCATGCTGTGCCGCCGCTACGGGGCGACCGGGGCATACACGCCCATGCTCCACTCCCGCATCTTCTCCGAGAACGAGAAGCACAGGGCCATGGAGTTCACCACATGCAAGGAGGACCGTCCACTTTTTGTTCAGTTTTGTGCAAATGATCCTGACATTTTGTTACAAGCAGCAAAGATTGTGGAACCGTACTGCGACTATGTCGATATCAATTTTGGATGCCCACAGCGCATTGCTAGAAGGGGGTACTATGGTGCGTTTCTCATGGACAACCTTCCTCTCATAAAATCCCTTGTACAGAATCTATCAGCAAACCTCCATGTTCCAGTATCATGCAAGATTCGCATATTCCCGCGACTGGAGGACACACTGGCCTACGCAAAGATGCTTGAAGAAGCTGGTGCTTCTCTGGTAGCTGTGCATGGGCGGACTAGAGATGAGAAGGATGGGAAGAAATTTCGAGCTGACTGGGATGCCATTAAAGCTGTCAAAGATGCTCTTAGGATACCTGTACTTGCAAATGGAAACATTCGCCATTTGGATGATGTGAAGGATTGCCTTGAACATACTGGTGCTGATGGTGTGCTTTCAGCTGAAACTCTTCTAGAAAATCCAGCATTGTTTGCTGGTTTCCGGACAAAGGAATGGAAAGAAAATGGTGATGAAGATGAAGCTAGTGGCTTAGACCAGGCTGATCTAGTCATTGAGTATTTGAAACTGTGCGAGCAGTACCCTGTTCCATGGAGAATGGTTCGATCCCATGTTCACAAGATGCTAGGGGACTGGTTTAGGGTGCATCCTCAAGTGAGGGAGGAACTCAATGCTCAGTCCAAGCTCACTTTCGAGTGGTTGCATGATATGGTAAAGAGGCTGAAGGATCTTGGTGGAGGAATACCGCTTTACAGAAACAATAATGCTTTACAGACTACATCAAATGGGCTAGCTGCAAGCAACGCCTGA</cdnaseq>

Protein Sequence

<aaseq>MSPPAAAHLATASDPDEDLCFTTESVAPAEEIAPPLPAPPPPVSAEERVERAWAHWRRLGSPKMVVAPMVDNSELPFRMLCRRYGATGAYTPMLHSRIFSENEKHRAMEFTTCKEDRPLFVQFCANDPDILLQAAKIVEPYCDYVDINFGCPQRIARRGYYGAFLMDNLPLIKSLVQNLSANLHVPVSCKIRIFPRLEDTLAYAKMLEEAGASLVAVHGRTRDEKDGKKFRADWDAIKAVKDALRIPVLANGNIRHLDDVKDCLEHTGADGVLSAETLLENPALFAGFRTKEWKENGDEDEASGLDQADLVIEYLKLCEQYPVPWRMVRSHVHKMLGDWFRVHPQVREELNAQSKLTFEWLHDMVKRLKDLGGGIPLYRNNNALQTTSNGLAASNA</aaseq>

Gene Sequence

<dnaseqindica>1..342#688..794#994..1735#ATGTCACCGCCGGCCGCCGCCCACCTCGCCACCGCCTCCGATCCCGACGAGGACCTCTGCTTCACCACCGAATCGGTCGCGCCCGCGGAGGAGATCGCCCCGCCCTTGCCCGCCCCTCCGCCGCCGGTGTCCGCGGAGGAGAGGGTGGAGCGCGCGTGGGCGCACTGGAGGCGGCTGGGCTCCCCGAAGATGGTGGTGGCGCCCATGGTGGACAACTCGGAGCTCCCCTTCCGCATGCTGTGCCGCCGCTACGGGGCGACCGGGGCATACACGCCCATGCTCCACTCCCGCATCTTCTCCGAGAACGAGAAGCACAGGGCCATGGAGTTCACCACATGCAAGGTAAATTCTCCTTGATGGTTGGTTTATACGATTTCTTTTCTATTCAATTCTTGGATCCTTCAATTAGAGCGCCCGGAGTAGTTTAAGCTAATTCTTCACTGGAGTAATAATTTTGATGATGCTTTGATAATTCGTAGTTACCGAGAAAATTCCGAGCGATACATCTGTCATATCACTACACAAAGGATTAGATAGTAGTTTGATAATTAGCTTTTATTTTAGATAGTAGTTTGATAATTACTAGCTTTTATTGTCCTGTTACCTCTGTAATCCATTAATCGTTCTTTGTATTGGTTATGGAACATACTGAAAATAGAATGTGACAATTGGTGGTATGTTATACAGGAGGACCGTCCACTTTTTGTTCAGTTTTGTGCAAATGATCCTGACATTTTGTTACAAGCAGCAAAGATTGTGGAACCGTACTGCGACTATGTCGATATCAATTTTGGGTAATGTTGTATTCCCTACTCTATGCTGAAAATTTCCTCTGCTCTGACTTATTTGGCATTTTACTGTTTAGTAGATCTCCCCCTTTTCTGCTCAGTTAATTGAAATGTCAGTTCCCCCGAAAAATAAGCATTACTTCATACCATGTTTTGTTCTGGATGCTCTTCTAAATGGCAATACCACCTCTCTGAAATCTTGCAGATGCCCACAGCGCATTGCTAGAAGGGGGTACTATGGTGCGTTTCTCATGGACAACCTTCCTCTCATAAAATCCCTTGTACAGAATCTATCAGCAAACCTCCATGTTCCAGTATCATGCAAGATTCGCATATTCCCGCGACTGGAGGACACACTGGCCTACGCAAAGATGCTTGAAGAAGCTGGTGCTTCTCTGGTAGCTGTGCATGGGCGGACTAGAGATGAGAAGGATGGGAAGAAATTTCGAGCTGACTGGGATGCCATTAAAGCTGTCAAAGATGCTCTTAGGATACCTGTACTTGCAAATGGAAACATTCGCCATTTGGATGATGTGAAGGATTGCCTTGAACATACTGGTGCTGATGGTGTGCTTTCAGCTGAAACTCTTCTAGAAAATCCAGCATTGTTTGCTGGTTTCCGGACAAAGGAATGGAAAGAAAATGGTGATGAAGATGAAGCTAGTGGCTTAGACCAGGCTGATCTAGTCATTGAGTATTTGAAACTGTGCGAGCAGTACCCTGTTCCATGGAGAATGGTTCGATCCCATGTTCACAAGATGCTAGGGGACTGGTTTAGGGTGCATCCTCAAGTGAGGGAGGAACTCAATGCTCAGTCCAAGCTCACTTTCGAGTGGTTGCATGATATGGTAAAGAGGCTGAAGGATCTTGGTGGAGGAATACCGCTTTACAGAAACAATAATGCTTTACAGACTACATCAAATGGGCTAGCTGCAAGCAACGCCTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA020544