BGIOSGA020546

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Revision as of 12:47, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA020546| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA020546, complete gene.| tag = SPW1| ...")
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Gene Name

BGIOSGA020546

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA020546, complete gene.

LocusTag

SPW1

Ensembl Transcript ID

BGIOSGA020546-TA

Ensembl Protein ID

BGIOSGA020546-PA

Length

3847

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:31967739..31971585

Sequence Coding Region

31971398..31971585,31971230..31971296,31970964..31971025,31970695..31970794,31970205..31970246
,31968029..31968073,31967739..31967906

Genome Context

<gbrowseImage1> name=IndicaChromosome06:31967739..31971585 source=RiceIndica06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome06:31967739..31971585 source=RiceIndica06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGGGAGGGGCAAGATCGAGATCAAGCGGATCGAGAACGCGACCAACAGGCAGGTGACCTACTCGAAGCGCCGCACGGGGATCATGAAGAAGGCCAGGGAGCTCACCGTGCTCTGCGACGCCCAGGTCGCCATCATCATGTTCTCCTCCACCGGCAAGTACCACGAGTTCTGCAGCCCTTCCACCGACATCAAGGGGATCTTTGACCGCTACCAGCAAGCCATCGGCACCAGCCTTTGGATCGAGCAGTATGAGAATATGCAGCGCACGCTGAGCCATCTCAAGGACATCAACCGCAACCTGCGCACCGAGATCAGGCAAAGGATGGGAGAAGATCTGGACGGGCTGGAGTTCGACGAGCTGCGCGGTCTTGAGCAAAATGTCGATGCCGCCCTCAAGGAGGTTCGCCACAGGAAGTATCATGTGATCAGCACACAGACTGAAACCTACAAGAAAAAGGTGAAGCACTCCTACGAGGCGTACAAGACTCTGCAGCAGGAGCTGGGGTTGTGCGAGGAGCCGGCGTGGTTCGTGGACAACACCGGCGGCGGGTGGGACGGCGGCGCCGGCGCCGGCGCGGCGGCGGACATGTTCGCCTTCCGCGTGGTGCCCAGCCAGCCCAACCTGCACGGCATGGCCTACGGCGGCAACCACGACCTGCGCCTCGGTTGA</cdnaseq>

Protein Sequence

<aaseq>MGRGKIEIKRIENATNRQVTYSKRRTGIMKKARELTVLCDAQVAIIMFSSTGKYHEFCSPSTDIKGIFDRYQQAIGTSLWIEQYENMQRTLSHLKDINRNLRTEIRQRMGEDLDGLEFDELRGLEQNVDAALKEVRHRKYHVISTQTETYKKKVKHSYEAYKTLQQELGLCEEPAWFVDNTGGGWDGGAGAGAAADMFAFRVVPSQPNLHGMAYGGNHDLRLG</aaseq>

Gene Sequence

<dnaseqindica>1..188#290..356#561..622#792..891#1340..1381#3513..3557#3680..3847#ATGGGGAGGGGCAAGATCGAGATCAAGCGGATCGAGAACGCGACCAACAGGCAGGTGACCTACTCGAAGCGCCGCACGGGGATCATGAAGAAGGCCAGGGAGCTCACCGTGCTCTGCGACGCCCAGGTCGCCATCATCATGTTCTCCTCCACCGGCAAGTACCACGAGTTCTGCAGCCCTTCCACCGAGTCTGTATCTCCATCTCCACTTCGACTCTATGATCTTCTCCATCCTGATTATACTATATATATAACTGCATCATATCGATCTTAATTGCATCCTGCTGCAGCATCAAGGGGATCTTTGACCGCTACCAGCAAGCCATCGGCACCAGCCTTTGGATCGAGCAGTATGAGGTTGATTTGTTTAATTTCTTCCTTTCTTCCCCTCCGCTAGCTGCAACCAAGCTGCTTACTTCGATTCTCTCCTTATGATTTGTTTTCTCATCTTTTGCTCGATTCGTCTTTTCAATTTTCACTCCAGTTTCTTTCCTTTAATTCTATGTCCCAACTCTCTTCTGCTCGTTAATTGGTTTGGTTTGGTTTGTTTTCATCCATCAGAATATGCAGCGCACGCTGAGCCATCTCAAGGACATCAACCGCAACCTGCGCACCGAGATCAGGCCAGCACAAATTTCACCCCTTTAATTACTTTCCTCTCTTCTCCTTAATTAATCCCTCTTAGTATATAGTTACTGGGGGATTTTAGCTTGAACAAGAGATCCAAATTTACAACGTTTTTCAAGATATGTACTGCTGGATCTGAATATAAACAACCATACGTGTGTGCAGGCAAAGGATGGGAGAAGATCTGGACGGGCTGGAGTTCGACGAGCTGCGCGGTCTTGAGCAAAATGTCGATGCCGCCCTCAAGGAGGTTCGCCACAGGAAGGCATGCACGCACGCACGCCCTAATTAAACTACGAACCCTAATTTGTTCAATACTAAAACGTCGTTCAATTCCTTAATTCAAGGGTGGTAGATCCTTGTATTTTGTGCACACTAGATCTACGGTTCATGATCAGATCCGTGCATATTTCATGCTTCTCGCTACAGATCTACGAGTTTCTTGAACCCTTCTTGGCTTCTTGCATGTGTGGAAATTATATTGATGGTTTTTAATTTGGCCTCTGTTGCTTGCTCGTATTAAACAAGATAATTTTAAGGTTTATGCTTTATAGAAACATAATTTATGTGTACTATTGTTTTATCTTACAACTAGTAGGATGTATGCTCATTGATCTATTGGACTGTAACATATTAAACTTTCTGCTTAATGTATCCTAGCCTTTTAATTTGTTTCAGTTTTCTCATGATTAATTCGGTTTTAATTTCTGCAGTATCATGTGATCAGCACACAGACTGAAACCTACAAGAAAAAGGTCAGGAATAAGCCATGCCCATTTTCTCAGTATTTGTTTCTGGTTAAATTTATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATCTATATATATATTCCTCCCTCTATATATTGTTGTATATAGGTGTACATCTACTGTGGATTTTATTCCTTCCCTTGGAAGCTGTTGACTATGTGTGCATCTCTTGTGGATATATAGGCCGGATTTAATCAATCCATTATCTTAAAAAAAAATACTGCCAATATTATGCCTAATAATGCAGCAATATTAGTATATATATGTATGTTCTTCTGGTGCAGTAATAAGGGTATATCTAGATATCTGCACAAGCCTATATAAGTGTATATGTATCTTCCCCAATTCCTTCCTTTAATTGCTTCACTTTTATGGCCACCATCACTGCTTAAATTTGCTTAGTTTGGCCAATAAGTTCGCACTTGCAGTGTCGTCTATGTTCACATGTCTTTCTGAAGAGCTATATGCTATCCCTTTGATTGTACGTTGTTCACATTTTTCCTGACGATATTAAGTTCCTCCGGGTAAAATATACATTGATCCCGTGAAGTAAATTGCACTCACCCAATAACCTGCATTTTGCCTTATTGCGTGCTAATTTAGCCATATACATAGCCATGGATCTCCCAGTTTCTGTACTTGAACAGTCGAAGCTAGCTAAGCTAGCCCTTGAATCGATCAAAAGCCAAAATAAAAGATCTGACAAGCACCATGACGCCTCTCAACCGAAACATGCATGCTAATGTACAGTGTGCATTACCATGCGTGTCTGTGCATTTCCATACTATCTACACATCAATATTTGATCGAGGCTACCTGATCTACACATCTAGTCTAAGCTATACACATAGCCATCAGTAGATGTACATCGATGTTAATTGGAGCATGCATTGTCATGTGCATTCCTATACATTACATGATGAACAACGCACGCAATATAATGCGATCTGCGATGCAGTTTTCTGTCTTTTTTGCAAGCTAGAACTCATGACAAACAGCAAAGGACAGTAGTATGAATTGGGCATGTATCTGCATATATATGCGTATATGTATCTCCTGTTAAGCAAACAACTAAGCCAGGATCGGTAGCTATATAAACTAGCTGTACCTAGAGACGATGAAGCATGCATGCTTATTTTGGTCCCCCGGCTATTTAGGAGAGTAGCATGTCAAACACGGATTTTTATGAGAGATTGCATCGCGGCGTGATACCTTTTGGTAGATAAGGGACGGCATTGAGGCTTTATGATTTGCAAGAATTTGGAAACCAAACCATTACGGCCGCTGGCTTACTGAATCTTTAGTGGGGTGTACTACTAATTAATTACTCAGCTTGAACAACCGAGCAAAAGCGAATACTTTTGACTTTACATTCAATCGACTTTAATAGGGAGTACTCTTTGTTCATTGTTTTGTAGTTTTACCTGCGGTTAGCTGGTCAGAATTAAACATATATATATATACACACATATACATATATATATGTAGCTGAATAAGTAATTCATTGCATCGAGGGGATTGTTAACCATTCATGCATATCTAACTGTGTTGTCGGCTGAGGTGAAAATTAACCAGTTCAAGCATGCATGTTGGCATATAGTATAAGCTAGCACATCACAAATTCACAATCACCTTCAAGTGTTTAATTTCGCTGCATTAGCTACTCCTTTGGTCTTGTTACGTGAGAGAGCTGACAGAGAGTAGTGTATAAACTCTGAACAAAGAACTGCACTTTGATATGGAGCTAGCTAGAAGATGACTTTGAATCTGTATATATATCTTTGTCATTGTGATATGGGAGAGGATAACTTGCTTAAATTTTATGTGAGTGACTGTTCATAGAAATAAACTTGACGATTGTTTCTTGTGTGCTATAGCATGCTGTCCGAAGATGCACACATGTATATATACACATTGCAGTGACACTCTACTTTTACTTGCACACATATGCTGGGCCCTGTGTCTATACATGCATGCACATGATATAATTTGTCTGTCTATAGCTAATAGAGATTGGTTTCTACATTAATTGATCCGGTGTGTGCATGCATATAATGCAGGTGAAGCACTCCTACGAGGCGTACAAGACTCTGCAGCAGGAGCTGGTAACCTATCAAGCATTTTTTTTCAGTTATAGCCAGAAAATTATTTGTTAATTAGTTTCTCCAATGCAGGCTAGCTAATTTGATTGAACTCTACTGTTGGGTGAATGTTTGAATTAATTCAGGGGTTGTGCGAGGAGCCGGCGTGGTTCGTGGACAACACCGGCGGCGGGTGGGACGGCGGCGCCGGCGCCGGCGCGGCGGCGGACATGTTCGCCTTCCGCGTGGTGCCCAGCCAGCCCAACCTGCACGGCATGGCCTACGGCGGCAACCACGACCTGCGCCTCGGTTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA020546