BGIOSGA020547

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Revision as of 12:47, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA020547| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA020547, complete gene.| tag = OJ1663_...")
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Gene Name

BGIOSGA020547

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA020547, complete gene.

LocusTag

OJ1663_H12.23

Ensembl Transcript ID

BGIOSGA020547-TA

Ensembl Protein ID

BGIOSGA020547-PA

Length

5421

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:31922551..31927971

Sequence Coding Region

31927761..31927971,31927545..31927663,31927356..31927462,31927179..31927266,31925080..31926133
,31924910..31924964,31924740..31924821,31924577..31924657,31924386..31924490
,31924255..31924304,31923303..31923480,31922551..31922607

Genome Context

<gbrowseImage1> name=IndicaChromosome06:31922551..31927971 source=RiceIndica06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome06:31922551..31927971 source=RiceIndica06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGTCCACCGACCAGCCTCACCTCCCGCCGCCCGCGCCCCCGCCCGGCGCCGCGGCGGCGGATCCCCCCGAGTCCACCCCCGCGCCGCCTCCGCCGCCGCCGCTCGAGCCACCCGAGGTGATGCACAAGACGAGGGCCGTCGACTTCCTCGGCCGCCGCACCCCAATCGTCTACCAGAACGACAACGGGCCGTGCCCTCTCCTCGCCATCTGTAACGTGATGCTGCTGAAGAATGTGATCAGCTTGAACCCGGACGCGGGCGAGGTGTCGCAGCAGAAGCTGCTCTCGCTCGTCGCCGAGCGCCTCATCGACTCCAACAGCAATGTGCAGGGTAAGGACGAGGAGTATGTGCGCAACCGGGAGCAGAACATCTCGGATGCGATTGACCTTTTGCCGCGCCTCGCGACCGGCATTGATGTGAATGTGATGTTCAGGAAGATCGATGACTTTGAGTTCACCCGAGAACGTGCCATATTTGACCTTCTGGATATCCCGCTGTACCATGGGTGGATAGTAGATCCCCAGGATACTGACACTGCTACTTCCATTGGATCAAAGTCTTACAATGCTCTTGCATCTGGGCTTGCTGAATTTAAGTCGGGGGAATCAACAAAAGAGAATAGACATGTACAGGAGGAAGAAACTGTTGATTTTGCTGCTGCAACTACTGCAGCACTAGGGGTTCCTTCTCCTAGTGTTTCTCGAGGTATATCATTTGATGAAAATACACTCACTGACCCAGTTGAGTTGCACATAAGACGAGGCGATCGTGAGGAAGAAGAGGAACTAAGGAGAGTCCTTAGTCTATCAAAAGCTGAAAATGCTAATGCTGTTGATGGATCTGGTTCCTTTGACACTTCACAGTCTCATTCATCCTCAAATATGGAGGAGACAGCACACACTGAGAGCTTCCAATTAGAGGCAGTCGAGGCGATGGATTCAACAAATAAGGAGGAACATGGCAACAGCCATGCTTTGAGCGATGGCCCTATGTTACAGGACAGCACAAATGCTGCTCCTAATATTAATGAAGTTGGGATGGAGGAATCCCAACAGGTTTTGACGTCTAATGAACTAGAAGACGATGGGAAAAGGAATATCTTGCCAGAGCACTCTGATATAACCATTCAACCTTCAGAGTCTGTGCTTGACTGTTCCTCTCATGAGTCTTCTGCTCCCAACCAAGCTGCTCCTGCCCTTGGGCAAGTTGATAAAGAATCCTGTGAAGAACAAGCTCCCTTGCAAATTCATGGTCAGGCTTCTGACACTGAGAAAATTCATGGTCAGGCTTCTGACACTGAGATTAGCTCTGAGCTAACAACTGCAGCTAGTCAAGATACCCCAAATCATGCTACTAAAGAGCTGAATGGGGAAGATGGCAATAGTCCTGAGCCTATCATCTTAAACCTTCAGGAAAGTGAGCCAATATATCAAGGAGAAGAGCACATACTTAGCACTGGAAATTTGGCATATGAAAATCAGGAGCCGGTTTATGAGGGAGAGGTGGTTCTTGCTGAACAAGCTGACAAGACTGAGAAAAGTAGTGAGGACATGCAAGATGGGCCTGCAGAACATCAATGGGAACTAATAGATAATTTCCTTCAGAACACTGCTAGCCAGCTAACTGTCTATGGTTTATTTTGTCTACAAGAGGGTCTTAACGAAAGAGAGCTGTGCGTCTTCTTCCGTAATAATCATTTCAACACAATGTTCAAGTACAATGGAAGCCTATATCTCTTAGCCACTGATCAGGGTTTTTTCAGCCAAAGTGATTTAGTATGGCAAAAGTTGGATGAGGTGAATGGAGATGGAGTTTTTCTGACCAGCAATTTCACACCATTTAAGGCTGAAAACCCGAGAAATGATTCTTGGAATGAACAGCAGGCTATGACAAGTACCGCTGACTATCTTGCTCAATTTGACAATACTACCCTGCAGCACTCGTCTGGAAACTCTGATCTAGAGCTAGCTATAGCACTTCAACAACAGGAGTTTGAGCGGCAACAACCTCAACGACACCAGTCGTCAACACAGCAGCAGGAGCCGGTGCCCCAGCAGCAACAGCAGACACCCAATCAATCACATGGCACAGGTCGGCCAGGATTAGTTGTTGGTCCAACAACGGCAAGGAGGCCACCTGCTCCACAGCCGACGACGCCGAAGAAAGAGAAGTGCATCGTGATGTAA</cdnaseq>

Protein Sequence

<aaseq>MSTDQPHLPPPAPPPGAAAADPPESTPAPPPPPPLEPPEVMHKTRAVDFLGRRTPIVYQNDNGPCPLLAICNVMLLKNVISLNPDAGEVSQQKLLSLVAERLIDSNSNVQGKDEEYVRNREQNISDAIDLLPRLATGIDVNVMFRKIDDFEFTRERAIFDLLDIPLYHGWIVDPQDTDTATSIGSKSYNALASGLAEFKSGESTKENRHVQEEETVDFAAATTAALGVPSPSVSRGISFDENTLTDPVELHIRRGDREEEEELRRVLSLSKAENANAVDGSGSFDTSQSHSSSNMEETAHTESFQLEAVEAMDSTNKEEHGNSHALSDGPMLQDSTNAAPNINEVGMEESQQVLTSNELEDDGKRNILPEHSDITIQPSESVLDCSSHESSAPNQAAPALGQVDKESCEEQAPLQIHGQASDTEKIHGQASDTEISSELTTAASQDTPNHATKELNGEDGNSPEPIILNLQESEPIYQGEEHILSTGNLAYENQEPVYEGEVVLAEQADKTEKSSEDMQDGPAEHQWELIDNFLQNTASQLTVYGLFCLQEGLNERELCVFFRNNHFNTMFKYNGSLYLLATDQGFFSQSDLVWQKLDEVNGDGVFLTSNFTPFKAENPRNDSWNEQQAMTSTADYLAQFDNTTLQHSSGNSDLELAIALQQQEFERQQPQRHQSSTQQQEPVPQQQQQTPNQSHGTGRPGLVVGPTTARRPPAPQPTTPKKEKCIVM</aaseq>

Gene Sequence

<dnaseqindica>1..211#309..427#510..616#706..793#1839..2892#3008..3062#3151..3232#3315..3395#3482..3586#3668..3717#4492..4669#5365..5421#ATGTCCACCGACCAGCCTCACCTCCCGCCGCCCGCGCCCCCGCCCGGCGCCGCGGCGGCGGATCCCCCCGAGTCCACCCCCGCGCCGCCTCCGCCGCCGCCGCTCGAGCCACCCGAGGTGATGCACAAGACGAGGGCCGTCGACTTCCTCGGCCGCCGCACCCCAATCGTCTACCAGAACGACAACGGGCCGTGCCCTCTCCTCGCCATCTGTGAGAATCCCCCCACCTTCTAGATTCCCTTCGGGTTTCAATTCGCCCCCGCGCGCGCGGCGTTGTGATGTGTGGGGTTTTGTTTTGGTTGCTGCAGGTAACGTGATGCTGCTGAAGAATGTGATCAGCTTGAACCCGGACGCGGGCGAGGTGTCGCAGCAGAAGCTGCTCTCGCTCGTCGCCGAGCGCCTCATCGACTCCAACAGCAATGTGCAGGTTCGATCGGTCCCCGTGGGGTTAGAGATGGGGGTTGTTTGTTGTGTTGCCTTGTGAATTGGTTGTGGGGTGTGATTCGCAGGGTAAGGACGAGGAGTATGTGCGCAACCGGGAGCAGAACATCTCGGATGCGATTGACCTTTTGCCGCGCCTCGCGACCGGCATTGATGTGAATGTGATGTTCAGGAAGTGAGTCCATGGTTCGGTTTGTCGGTTAGCGGTTTGTTGTTTATGGTGCTCTATATGTTCTGATATGATTCGGGCTGTGGGCGTTGCAGGATCGATGACTTTGAGTTCACCCGAGAACGTGCCATATTTGACCTTCTGGATATCCCGCTGTACCATGGGTGGATAGTAGATCCCCAGGTATGCATCTCCTTATGGCATGTTTGTTTGGTTTAGCCATGTTGAACTTCTGTATCTAGACAACTGGATCGGCGTGCGGGTTAGAGTTTACTGTACTTCTTTCGACATGGAATACAACAATTCTTGTGCTTGGAGATAACTTCATGTGTATACCATTCACAGTTTCTGTTATTTAGAACAGAGACCATGTGTTCATGCTTACCATCTGCAACAACACTCAATAAAAAAAAGGAAGTGTAATATGTATGCCAGTGTACTTGTCCCCCCCCCCCCCCACCCGCATATATACCTTATACGGGCAATGTTTACCATTGTTTTGAAAACTCGTTTGAAAGCTCTATCAAGTAGCTACGTGGTGATTCTATTTGATAACTGGTAGCACTCACAGCTATTGCTTGGTTTCGCAAATATGTATCACATTTAATTAAGCTAGTTTTCTACATTGTTTCCCAACTATGTACTAGTTAAGATCCTCCAATTTGCAATTCAGACAGTGCGGAACTTCCTCGTCACAAATATATGTTGTTTTCTATGTTGACGCGGTCTTCAAACTACAACTTCTGATCACTAATTTCTTTTATGAGTAAAAGCAAGACAATCACTCTACGTTGTTTTCCAACTTTTTACTAGTTAAGATGCTCCAACCTGCAATCCAGACAGTGTTGAACCTCCTCGTGTCACAAATATATGCTGTTTTCTATGTTGACATGGTCTTCAAACTACAACTTCTGATCAGTAGTTTCTTTTAGGAGTAAAAGCAAGACAGTCGGACTGGCTCTATGGTTGCGTTTTGATTTGAGTATTGTATGTGATGCTCCAACAAAAAGCGTATACTTGTGTCTAGACATGATAAGTTTCTGTAGCAACCAAAACTTAATATAGGATTTATTTATCTTGTGCAATACAATTTGTTAAGATAGCCAGAAGGATGCTCGAACAGCATAGTCAATACCTCCCTACATGCTGGATGCATAAGAGATTTCGCTTGCCTCTTACGTCTGCAATTCTCACCTGCATGCTAATTCTGATTGTTTCATATTTTTAGGATACTGACACTGCTACTTCCATTGGATCAAAGTCTTACAATGCTCTTGCATCTGGGCTTGCTGAATTTAAGTCGGGGGAATCAACAAAAGAGAATAGACATGTACAGGAGGAAGAAACTGTTGATTTTGCTGCTGCAACTACTGCAGCACTAGGGGTTCCTTCTCCTAGTGTTTCTCGAGGTATATCATTTGATGAAAATACACTCACTGACCCAGTTGAGTTGCACATAAGACGAGGCGATCGTGAGGAAGAAGAGGAACTAAGGAGAGTCCTTAGTCTATCAAAAGCTGAAAATGCTAATGCTGTTGATGGATCTGGTTCCTTTGACACTTCACAGTCTCATTCATCCTCAAATATGGAGGAGACAGCACACACTGAGAGCTTCCAATTAGAGGCAGTCGAGGCGATGGATTCAACAAATAAGGAGGAACATGGCAACAGCCATGCTTTGAGCGATGGCCCTATGTTACAGGACAGCACAAATGCTGCTCCTAATATTAATGAAGTTGGGATGGAGGAATCCCAACAGGTTTTGACGTCTAATGAACTAGAAGACGATGGGAAAAGGAATATCTTGCCAGAGCACTCTGATATAACCATTCAACCTTCAGAGTCTGTGCTTGACTGTTCCTCTCATGAGTCTTCTGCTCCCAACCAAGCTGCTCCTGCCCTTGGGCAAGTTGATAAAGAATCCTGTGAAGAACAAGCTCCCTTGCAAATTCATGGTCAGGCTTCTGACACTGAGAAAATTCATGGTCAGGCTTCTGACACTGAGATTAGCTCTGAGCTAACAACTGCAGCTAGTCAAGATACCCCAAATCATGCTACTAAAGAGCTGAATGGGGAAGATGGCAATAGTCCTGAGCCTATCATCTTAAACCTTCAGGAAAGTGAGCCAATATATCAAGGAGAAGAGCACATACTTAGCACTGGAAATTTGGCATATGAAAATCAGGAGCCGGTTTATGAGGGAGAGGTGGTTCTTGCTGAACAAGCTGACAAGACTGAGAAAAGTAGTGAGGACATGCAAGATGGGCCTGCAGAACATCAATGTGAGAATTTTGTTTGTCCTGTCATCTATTATGTATTTGTATTTGTTTGAAGATCAAACACACATGAATATCCAGTGCATAATGTTTGATATTACATTTTCTTATTTGTCTGCAGGGGAACTAATAGATAATTTCCTTCAGAACACTGCTAGCCAGCTAACTGTCTATGGGTGCGTACTTACTATATAGGTTTAAACCTCGTGTATATTTCTTATTTATACTGTTAACTAATGCCTGGGCGAAATTTCTACATTACAGTTTATTTTGTCTACAAGAGGGTCTTAACGAAAGAGAGCTGTGCGTCTTCTTCCGTAATAATCATTTCAACACAATGTTCAAGGTATGATGATTAATTAAGTTATAGTCTCCAGTTTCTTTAATAAGCCACCCAAGTTAAGTTCTTAAGTTCTTTTTTGGTGCAGTACAATGGAAGCCTATATCTCTTAGCCACTGATCAGGGTTTTTTCAGCCAAAGTGATTTAGTATGGCAAAAGTTGGATGAGGTACACCACACCATTTCCAACAGTTTGTTTGCTCGAAATAAGGGTTCTTTTACTGATTTATTCTGTTCGCAATTGATATTCATCAGGTGAATGGAGATGGAGTTTTTCTGACCAGCAATTTCACACCATTTAAGGCTGAAAACCCGAGAAATGATTCTTGGAATGAACAGCAGGCTATGACAAGTACCGCTGTATGTGCAACATCGATAAGCTGGTGTTATCTCCATTGGTTTCTATAATGTTAACTGATTCAAATTGTATTCTGTCCACAGGACTATCTTGCTCAATTTGACAATACTACCCTGCAGCACTCGTCTGGAAAGTATGCCCTTCCTACCTATGTTTTTCTTTAAGTAGTGATGTATTGGTCAGTCAGAGAGTAGGTGTTACTGGAATCGCTGTTTTGACCTCTATGGTGTTGTGCGTCTCTTGAATGACATTTTGCTTGTCAACGCAAGTACATCTATTCAGCTATATTGATGCCACTTGAACCCAGAATATCTCTCTAGCCTGTTCTCAGCTTTTATTTTATATGGTGTTCTGCTGTCTGTAGGTTCTGGATATCTGTTTTGTTTTATGATAATTTGTTGCAACCCAAGTATGATGCTATTTCCCATGGTCAGTTCCTTGGTAGTTTGTGATAGCTGGGAATCTTGAAATTCTTGTCAAACTAATCATTTACCACTCTCCTGGTGACCAATATTTAGATATGGTTCATGGAGTTCATATGCCTGCTTATTGTGAATGTATCTTTATCTTACTTGAAGTTGACATGCTCACAAATGCTCCCCGTGCATGAGGTTAATTAAGTTCAGTCTTCACTTATCTCACAAGCACATAATAGTTAATGCACAATCAGTTTGGTATGACAATCCAGTCAACAAGTTTGCTTTACATCTTAACAAAATGTGCATGACACTGGAAGAGAATTGTGCAATGCACCTGCACACTAGTACCGTGGCTAAATTTCATTTAATACTATCGACACACTTCCTATTGTTGTTTCTTTTAGGTATTATTGCTTTTGTTTCTGCACGTGTGCCTAAGGTGAGTAAGGTCTAATATATGTGTGTTGGTGTTTCTTCTGTTCTGGCAGCTCTGATCTAGAGCTAGCTATAGCACTTCAACAACAGGAGTTTGAGCGGCAACAACCTCAACGACACCAGTCGTCAACACAGCAGCAGGAGCCGGTGCCCCAGCAGCAACAGCAGACACCCAATCAATCACATGGCACAGGTCGGCCAGGATTAGTTGTTGGTCCAACAACGGCAAGGGTATGTTTTTTTGCTTTGAAGGATTCTGCCAGTAGCAAATTTCTGTTAATTAGTACAAAAAAGAATCTCATTGTTGTGCACTGCATGTTAGGATTGTTATATTTGATTTAGATGATATCTGTCATAGCTTGTAGTGCTTTGGGGGGCTTGAGGCTTTTAGTTTATAAGGTTAAACTTGCTCTGGAGTCACCAGTTTGTCGTAAGGGGCATGGGGCTTTTAGTTTATAAGGTTAAACTTGCTTTGGACTGGCATATGCAAATTGGTTTTAGGATTGCCGAATTATCCACAAATATGATTAGTCTTTTTGAAGCAGAACATATGTTCTCCGTATACTTTTATGCAAGGTTAAAAACTCATGAAACCTGCATCCTGCGGCTAAAATATCAGAAAATCACCTGTTTTGTCTCTAGTATACACCTGAACCCAACCAACAAGCTAATTTACTGCACAAACTGTCGTTATGATGTTATATCAAGAGGAAAATAGAGTTAATACTAACATGTTCTAAGGAGCAAGCAGATCATGGGGTTGAACTTTTCGTTTTCGTTCTTTTCCCCTTATTTTCATCTATTGCTTGATCCCTTGATCGTGTCAGAACCGAGGACACGTGGTTTTACTTGTTCCAATCCGTATTATACAACTAGTATACCCTGTTTGATGGATCTGAATATGGAGTGGTTTGATCTTTGTTCAGAGGCCACCTGCTCCACAGCCGACGACGCCGAAGAAAGAGAAGTGCATCGTGATGTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA020547