Os11g0549620

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Revision as of 09:13, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os11g0549620| Description = Similar to Purple acid phosphatase| Version = NM_001189661.1 GI:297728452 GeneID:9266367| Length = 5854 bp| Definit...")
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Gene Name

Os11g0549620

Description

Similar to Purple acid phosphatase

Version

NM_001189661.1 GI:297728452 GeneID:9266367

Length

5854 bp

Definition

Oryza sativa Japonica Group Os11g0549620, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 11

Location

Chromosome 11:22185873..22191726

Sequence Coding Region

22186106..22186313,22186584..22186651,22186788..22186916,22187076..22187194,22187332..22187442
,22187744..22187903,22191434..22191631

Expression

GEO Profiles:Os11g0549620

Genome Context

<gbrowseImage1> name=NC_008404:22185873..22191726 source=RiceChromosome11 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008404:22185873..22191726 source=RiceChromosome11 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgatgatgaggtgtggttggtcggcggcggcggtggttgcggtggtcgtcatggttggtgtgatggtggcgtcgccggtggcgggggagctagctcgggtggagcacccgacgaaggaggacgggtcgctggcggtgctcgtcgttggcgactgggggaggaaggggcagtacaaccagacgttggttgccacccagatgggcgtgatcggggaggagttggctgccgacttcatcctctccaccggcgacaatttctacaacgatggcctcaccggcgacaacgacacggccagcttccaggagtccttcaccaacatctacaccgctgatagcctccagaagccttggtacattgttctcggcaaccatgactacactggagatgccctcgcacagcagagccccgccattcgcgccgtcgatagccgttggacctccattaacaagtccttcatcgtcgactcagatatcgcggagttcttcttggtggacacggtgccattcgtgcagaagtattggaacgagagcaagttcgactggagacaggtcgcccctcgtgacacctacctctccactctactcacagatttaggagacgcgatgtcgcagtcgaatgcgacgtggaagatcgtggttggacaccacaccatcagcagcggctgcgagcacggcaacaccaccgacctcgtcgccatgctcctccctgtcctcaagacctatggggctgacatgtacatcaacggccatgatcattgtttgcagcgcatcaccagcattgacagcccacttgaattcatcacgagcgggggcgggtcgagggcgtgggcggggaagtttaagcaaacctcggacaagctggagttcatctacgacgggcaagggttcctgtcgatgcagctgacgatggcggaggccagcttcgccttctatgacgtcaccggcgccgtcctgtacagctggcagctcgccaagtcaacctccaccaactag</cdnaseq>

Protein Sequence

<aaseq>MMMRCGWSAAAVVAVVVMVGVMVASPVAGELARVEHPTKEDGSL AVLVVGDWGRKGQYNQTLVATQMGVIGEELAADFILSTGDNFYNDGLTGDNDTASFQE SFTNIYTADSLQKPWYIVLGNHDYTGDALAQQSPAIRAVDSRWTSINKSFIVDSDIAE FFLVDTVPFVQKYWNESKFDWRQVAPRDTYLSTLLTDLGDAMSQSNATWKIVVGHHTI SSGCEHGNTTDLVAMLLPVLKTYGADMYINGHDHCLQRITSIDSPLEFITSGGGSRAW AGKFKQTSDKLEFIYDGQGFLSMQLTMAEASFAFYDVTGAVLYSWQLAKSTSTN</aaseq>

Gene Sequence

<dnaseqindica>5414..5621#5076..5143#4811..4939#4533..4651#4285..4395#3824..3983#96..293#aaaattcgaagtcgatcgccatctccaattctccatcgatcatctatctctcacgatcatctcgccggagctgtgtagtggtggtgaggaggagaatgatgatgaggtgtggttggtcggcggcggcggtggttgcggtggtcgtcatggttggtgtgatggtggcgtcgccggtggcgggggagctagctcgggtggagcacccgacgaaggaggacgggtcgctggcggtgctcgtcgttggcgactgggggaggaaggggcagtacaaccagacgttggttgccacccaggtatatacattacattgcatgtctgagacccgacttatctatttatttaacttataaatgaatttacgagctcgtgtgtgtagctgacaacgaagtaaatttaggcgccgcctctatagtttttttccggtggcggcaatgcttgatcggtcgatcaatccatcgctcacgaatgtattatgttgtcgatcaattattgctcttgtagagctacaatacaggtagtagaggactagtaggtataaccggtatgtacattgcttatttgtgatgtgagaccaactgatcgtggatcgaccacgctttcaaaccgctgcactcttttttttccccatttctttgagtaatttttaattagggctagctaatatatatacatgcatatatactccctagctccattgcaaaatatgtttattttacagttttaacaaagaataaggttgagtagaaaagattataatgcatggccctagatatgattgggatgggagagtggttagggttatatatgggaaaaatattaaatggggaatggttgataagataaatagtattttagaagtgcttatattttggtgcttaagaccacataattagaatatgcatattacatttttgtaggcggacaaaagtgattttctcaagcaaccaacttatccgtaggtttatttaataatggctttctctatatacagtcaatctgtagaaaatttgttcgtgaaatgatattattgtagaaaatttattcgtgaaaccatattattgtaggtggatgcatgattaagctgaccgcaaggcaattttgcagaataactgtataacggcctgcctatgattattcctttatatgtagagacaatattctttatattcaagcacaatattctttttttttaaaaaaaacaaaagaacatagagtactagtgtagctcgtactgattttgttggctgccatatagtgtaatagctggccgttgtagttattgttttgattatattttttgaaagtgcagtggtttatattaaaaaaaattacaagacaacagccctggaaagctataatcaggaaaagaaaataaaaccactacagatcgacaacacttgcacaagccaaagagctaacactacgtacgctgaccgctattactgtagacattaattgttttgattatagatctactagaggcaactctatgtctctatctcaaattaatattttacgtacccagctgccaggtctgtttatagagcacgagccatgaaatagcttcaactttggcagcatggtatattggggccaggagaaggctcaactgtgtggagtagaataggtgacaataactgacatcaaccttccatatatttgttttcgtgggaaaatatgaagtcatcggtgattattgtctacaaattaatactccatccgtttcaaaatataaagtgtatattgtttatttgtttgtttcggtaggacaaacctttgaccaacaaactagtaggatatataatttcttttgacaaaaaactaactaaatttatgatattcgtatttaagttacttatgattatgttttttattacataaatgatatcctaatagagcaacggatggagtacttcatctggtaaaactttctttttcaacttttggacgtgtgcacaatttatattagaataaatttataaaatacaataagtttaggagattacaaagtactttttaagatatatctgaagtcattactttttgaaactaactatattatataggctatatatggtcaaattttgcaagttaaattggatcttggcacccatcaattatttatggacaaatggagaagtacaacattaattagtctgtgaacgatatcgactctaccatactacggttgacctcaaagacttctctcaatgcctttggaggcccctattaatgagcaccaataatgaactagctaacaaattttagttattattaatgtgaatgcatgcatgtttggtgccctgaagcttatcatgcatggggtcttcatttacataagtagccgaaagtatttgttaggtaaggcatgtcactattatatagtgctatttctgaagcaaacaaacgagttcaaattaattgagatggacaatattcaaattattgttggccacaaacttaaattgattgggtgggtctccccaagagagctactactagctagctccctgcatgtgtcaacttgaactggatttttcacattttggtccttttaaaaaacttatttcgtaaatagactcctaaaaaaacttatcctaaaaatagtcctttttggggcgccagagtggctggcgccgtcgttcaacaggacggcgccagcctctttggcgccgtccccctgccgacgtggcggggcgatgctgaggtggctagggggagtgcgccagagtggctggcgccccccccccccccccccccccgaaattttttatttttgttttatttgtttgatatttttttcacgcttagggacacacaagaaccaaccatagaaaaattgaactcaaatggacgtaatatatgacatgtagaatttttcctctcctctcctctctctccgaactagtgcagaggagagagatgtgcaacttttttatttttattttatttttttgatatttttttcacacttaggaactcacaggagccaaccatgtaaaaaataaactcaaacggacgaaatatgtggcatgtggaattttcctatgtactgtttaaaaaaatataaaaaaatgaaataaaaataaaaaattgcatctctatatactgtttaacttatatatatgtcatttcatgtggttatattttgaattagattaagtaatttcatatagtggtagagtgcattatgtttaacatgctgatcaaagggttttactaaaggagttatggtctaattttagtgaaggtgcaaagtagactaagtggtatgctagatattttcagacttagctaagtggtagttcgagtttaaattttttttgtggttggttgtatcgtgatcctgagtgtgaaaaaacatccgaaaaaataaaataaaaatgacaccgttgcaactccatacagagaaacaggaatggaggcggcggcgccagccatgctggcgccctcctccctggggcggcgctagcctcctcctgccacgtcggttcgcgtgcgccacggtggcaggaggacggcgccagagaggctggcgccgtcccactctggcgccccaaaaaggactatttctgggacatgttttttcaggggtctatttgcgaaataagtttttcaaaaggaccaaaatgtgaaaaatccagtcaacttgaacctatagctaaattaattagctaatgtggatataataactagcttatcatttccctccaaatcaaaatcaaaattgattagtaatatgcatgacaattaagttgccatccagctcatgcatgcctatcaaagactggccacaatgtgtgtacttgaattgtaaatgcagatgggcgtgatcggggaggagttggctgccgacttcatcctctccaccggcgacaatttctacaacgatggcctcaccggcgacaacgacacggccagcttccaggagtccttcaccaacatctacaccgctgatagcctccagaagccttggtacattggtaataataattgcaacaataatattatgtccaccatatacatacatattgagatgtcaatgataaacaagatctcatcggttatgtgtcttgatctagattggtcttctgtagttaattttactatccttaaaaaaaaaaaataggaggtaccatatttttctaatataaaatttgatatcaggtaactcgatgtatcaaaatattttttttaaaaaaatccaaatgttttctcaagtaccgtaaaattcctcatctctcatacccacatatatttatatgcgcaattgcatgtgtatagttctcggcaaccatgactacactggagatgccctcgcacagcagagccccgccattcgcgccgtcgatagccgttggacctccattaacaagtccttcatcgtcgactcaggtatgtacttgcatatgacacatcgtcgtatcataccaaccaattcatccaaaagctttccataggacgatacgtctgaagaagaaaaagaaatatgtgtaacaattgctcattttttaaaatatatgaaattaaagatatcgcggagttcttcttggtggacacggtgccattcgtgcagaagtattggaacgagagcaagttcgactggagacaggtcgcccctcgtgacacctacctctccactctactcacagtaagttattgggtaaactaggcctttgcttaaacagaaactatacactactagaaaaatgatttttacaaacgaaagcattcttactggcgggctatatagttcatatgtacacgaactagagctgttatttaatcgcggttgcttgcacggatgcaggatttaggagacgcgatgtcgcagtcgaatgcgacgtggaagatcgtggttggacaccacaccatcagcagcggctgcgagcacggcaacaccaccgacctcgtcgccatgctcctccctgtcctcaaggtacaccctatacattgaatcatcgatcagtttaagttcacgtatgagctgagttcaaattctctggcaaaatccacacaaattaaatccaaaccctgaccgaaacactcctttttttttctttcgaaaacttcagacctatggggctgacatgtacatcaacggccatgatcattgtttgcagcgcatcaccagcattgacaggtaattataactttagcaccaaaaaagttttacgatcttgaaaggtactgggcattatattttgtatgcaaatatcatttttttatcatgtaaaatttgataggcatcaataggtgtcacatatattttgtagtgcaaaatttagtattcgagaaatgtaaaatttgtcctttagcacataccactattacattggttaccattctagctaccattggtgttaagtttaaattctttttcttatcgaattcgatgaaataaaaattatagcccacttgaattcatcacgagcgggggcgggtcgagggcgtgggcggggaagtttaagcaaacctcggacaagctggagttcatctacgacgggcaagggttcctgtcgatgcagctgacgatggcggaggccagcttcgccttctatgacgtcaccggcgccgtcctgtacagctggcagctcgccaagtcaacctccaccaactagtgatcaaagtcaacacttaattattgtgttaattagctgcttatgtgtgtgaaattggaacagtcaatgtactgcttcagttatcgatatatatactgtgacaaaagatgcacggtgtataaatagtgtgtgtgtttgtatacgtaagtatgcaagaatgttgctgtttgtaattgcatcctaagttcatgggataagttataatggctatctaaatgatattcagtgtgcgt</dnaseqindica>

External Link(s)

NCBI Gene:Os11g0549620, RefSeq:Os11g0549620