BGIOSGA020567

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Revision as of 12:48, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA020567| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA020567, complete gene.| tag = OsI_244...")
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Gene Name

BGIOSGA020567

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA020567, complete gene.

LocusTag

OsI_24400

Ensembl Transcript ID

BGIOSGA020567-TA

Ensembl Protein ID

BGIOSGA020567-PA

Length

5171

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:31708287..31713457

Sequence Coding Region

31713221..31713457,31712226..31712907,31710457..31710669,31709530..31709744,31708287..31708745

Genome Context

<gbrowseImage1> name=IndicaChromosome06:31708287..31713457 source=RiceIndica06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome06:31708287..31713457 source=RiceIndica06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGACGAAGCATCATCCAATGCTGCTCTTCCTTGGCCTAGCTGTGCTCGCCCTGCAGCCTCTGGTCGCGGCCGCATCACGGCGGCCGCCGCCGTCGCCGCTGTGTCCGAAGAAGTGCGGCAACGTCGACATCGAGTACCCGTTCGGCATCGGGCCAAACTGCTCGCTGTCCGACGATTTCAGCCTCGAGTGCGTCCACGACACCCCGCAGCTTCGCCTCGGCACCGATCGGCAGCAGGTGGTGGCCGTGCTCGACATCAACCTGCTCCACGGCAAGATCCGGATTGCCAACAGCATCTCCTGGCAGTGCAAGGACGAGAACGACCCAACCGGCGCCCCGTTGAAGAACAGCTCGTGGACGGGCCTCGACGTGACGGAGCTGCCGTACCGCTTCTCCTACGAGGACAACCAATTCGTCACCGTCGGCTGCAACGTGCTCGTCTTGCTATCCGGAGAGGAGGCGTCAGTCGACCCGATCCTGAACGTCTGCATGTCCACATGCTTCGGCAACGGGAGCAACATCAGGAACGGCTACTGCTCTGGCGCGGGATGCTGCGAGATGGCCATCCCCGTGGGACTCAAATCCTACCGGCTTGAATTCAGCGGGCCATTATTATTTAATAACAGCTGGTCGCCGGACAATTACACCTGGCGCAGCCACGCCGTGTTGATGGAGGCTAAAAGCTTCAGCTTCGAGAGGGACTACGCGACAACCGATAAGTTTTTCAGAAACAAGAACGGCACGGTCCCCGTCGTGCTCAACTTCGCGGCGGGCAGCGAGAAGTGCAAGGAAGCAAGAATGAAAGATACCTACGCGTGCGTCAGCGACCACAGCGCGTGCGTCGGCACGGCTGATGGCTACGTGTGCAACTGCACGAGTGGGTACAAGGGCAACCCCTACCTCCCCGGCGGATGCACAGATATTGACGTATGTGCTCCTGGAAATGACGGGTGTCCGGACGGGATGATTTGCAGTAATTTTCCCGGCGGACACAACTGCTCGTGTCCAGAAGGAGAGCACAAGAGCAACAAGAGTGGAGTACTCATCTGCGAGCCGGACCTGAAACGATCTTTGCCGGACCTGAAATTTAAACAATCTTACCGGCTCCCGGTCTCAGCGATCATAGCTATCGGCGTCACCGGTGGCATCGCTATCATCGTGATGAGCATCCTGAGTTCATACCTAGTACACCAGCGAAGAGCGCTTGCCGACATCAAGCGCAGCTACTTCAAGCGACATGGCGGCCTGCTTCTGTACGAGGAGCTGAACGCGAGGAAGAGCAACGCGTTCACCATATACACCGAGGAGCAGCTCGAGCATGCGACCAACGGCTTCGACGAGAGCAACGGGACGTGCGGTTACCTCGACCCAGAGTACATGCAGACATGCCAGCTCACGGAGAAGAGCGACGTGTACAGCTTCGGCGTTGTCCTGCTCGAGCTGCTCACCGGCAAGAAGCCGCTCTGCCTCGACGGGCCGGATGAGGGGCGAAGCTTGTCGGCGAGGTTCTTGGCCGCCATGAGGGAGAACAGAGCCGATTTGATACTGGATGAGCAGGTGAAGAGCGAGGCGAGCGGTGAGTTGCTGGAGGAGATCACGCTGCTGGCTCTGGAGTGCCTGCAGATGTGCGGCGGCGACAGGCCGGCGATGAAGGAGGTCGCCGAGAGGCTGGGCGGACTGCGGAAGCTGCACCAGCATCCATGGACGCAGGACGTCGTCGAGCTCGACGAGGTGCGGTGTTTGCTCAGCGACTCGCCGGAAAGTATCAGTTTTGAAGTGGACGCCACCAGTAGTAGCGGATACTGA</cdnaseq>

Protein Sequence

<aaseq>MTKHHPMLLFLGLAVLALQPLVAAASRRPPPSPLCPKKCGNVDIEYPFGIGPNCSLSDDFSLECVHDTPQLRLGTDRQQVVAVLDINLLHGKIRIANSISWQCKDENDPTGAPLKNSSWTGLDVTELPYRFSYEDNQFVTVGCNVLVLLSGEEASVDPILNVCMSTCFGNGSNIRNGYCSGAGCCEMAIPVGLKSYRLEFSGPLLFNNSWSPDNYTWRSHAVLMEAKSFSFERDYATTDKFFRNKNGTVPVVLNFAAGSEKCKEARMKDTYACVSDHSACVGTADGYVCNCTSGYKGNPYLPGGCTDIDVCAPGNDGCPDGMICSNFPGGHNCSCPEGEHKSNKSGVLICEPDLKRSLPDLKFKQSYRLPVSAIIAIGVTGGIAIIVMSILSSYLVHQRRALADIKRSYFKRHGGLLLYEELNARKSNAFTIYTEEQLEHATNGFDESNGTCGYLDPEYMQTCQLTEKSDVYSFGVVLLELLTGKKPLCLDGPDEGRSLSARFLAAMRENRADLILDEQVKSEASGELLEEITLLALECLQMCGGDRPAMKEVAERLGGLRKLHQHPWTQDVVELDEVRCLLSDSPESISFEVDATSSSGY</aaseq>

Gene Sequence

<dnaseqindica>1..237#551..1232#2789..3001#3714..3928#4713..5171#ATGACGAAGCATCATCCAATGCTGCTCTTCCTTGGCCTAGCTGTGCTCGCCCTGCAGCCTCTGGTCGCGGCCGCATCACGGCGGCCGCCGCCGTCGCCGCTGTGTCCGAAGAAGTGCGGCAACGTCGACATCGAGTACCCGTTCGGCATCGGGCCAAACTGCTCGCTGTCCGACGATTTCAGCCTCGAGTGCGTCCACGACACCCCGCAGCTTCGCCTCGGCACCGATCGGCAGCAGGTGGTGCCAGAAACACCAAGGGGTATTTCGGCTAGCTTCATAAAGTAGTGGGCTAGACGATCTGGGTTCGAAGTCTCACCCCTTCTAATTATATTTGATATTAGGTCTTTCGGGGGCGGAGACAGGCCTAGAGCAGCTAAGGCTTGAGCCCTAGGCCTGTCTCCAAAAACTTGCTTAAATTTTGTTGATTCATCATGTAAATTTTTCAGAAAACTGAAACTCCATTAGTCGAACCCTATCTTATCCTTAGTATTATATAATTTTTGGCTCCGCCACTGGTCTTTCCCTAATATTCTCGTGTTCTTTTTAGCAGGTGGTGGCCGTGCTCGACATCAACCTGCTCCACGGCAAGATCCGGATTGCCAACAGCATCTCCTGGCAGTGCAAGGACGAGAACGACCCAACCGGCGCCCCGTTGAAGAACAGCTCGTGGACGGGCCTCGACGTGACGGAGCTGCCGTACCGCTTCTCCTACGAGGACAACCAATTCGTCACCGTCGGCTGCAACGTGCTCGTCTTGCTATCCGGAGAGGAGGCGTCAGTCGACCCGATCCTGAACGTCTGCATGTCCACATGCTTCGGCAACGGGAGCAACATCAGGAACGGCTACTGCTCTGGCGCGGGATGCTGCGAGATGGCCATCCCCGTGGGACTCAAATCCTACCGGCTTGAATTCAGCGGGCCATTATTATTTAATAACAGCTGGTCGCCGGACAATTACACCTGGCGCAGCCACGCCGTGTTGATGGAGGCTAAAAGCTTCAGCTTCGAGAGGGACTACGCGACAACCGATAAGTTTTTCAGAAACAAGAACGGCACGGTCCCCGTCGTGCTCAACTTCGCGGCGGGCAGCGAGAAGTGCAAGGAAGCAAGAATGAAAGATACCTACGCGTGCGTCAGCGACCACAGCGCGTGCGTCGGCACGGCTGATGGCTACGTGTGCAACTGCACGAGTGGGTACAAGGGCAACCCCTACCTCCCCGGCGGATGCACAGGTACGTCCGTCCGTCTCCAATTCCACTGATTTGAGTTCCCGGATTTGTGGAGAGTTTTTTTTTTAGAATGATTTGTGGGGAGTTGCACGTGATTTTTTATTTTAATAATGAAAATCGGTACTAAGTATATCTTTTAGTCCTACTGAAGCTTGTTTAGTTCACGAAAAGAAAATTTTTGGATGTCACATCGGATGTTTGACCGGATGTCGGAAGGGGTTTTCGGATACGAATGAAAAAACTAATTTCATAACTCGTCTGGAAACCGCGAGACGAATCTTTTGAGCCTAATTAATCCGTCATTAGGGCATGTACAATGGTGTTTATTAATGGTCTCTCTCTATTGCCATGCAAGTAAATTTGATGACATGGAAGAAAGAGAAAGGAGTACGGTTGTTATGTATGACAACGGCTCAGAGTCGATTCTTAGCATTTATTAGAGCAAATTTTGTTGCATGGTGTTGAAAGAAAGGAAAGAAGAGTAAGAAAAAGTATTTTGATACATTAATTATTAGAGACTATAATGTCTCTAACTGTTGTAGGATGCTAGTCTCTAAATAACGTAGAGTCATATCTGACTCTATCTTTGTACATGCCCTTAGCATATATGTGTTACTGTAGCACTTATGGCTAATTATGGACTAATTAGATTGAAAAGATTCGTCTCGCGATTTAACCCATAACTATATAATTAGTTTTTTAATTTATATTTAATGCTCCATACAAGATTCGATGTGATGTTTCTTGGGGAAAAAAATTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNACATGATACCTTACGAGTATCACACGATACGTGGTAGAAATCGTCTGATACCTGACAGGTATCACATGATACCTCGCGAGTATTACACGATACGTGGTAGAAATCGCATGATACCTGATAAGTATCACATGATACTTTGCAAGTGTCACCTAAAACATGTGTAGAATCGTCTGATACCTGATAGGTATCACACCTGATACCTACTCGGAATCATCCCGTTTGAAAACGGAATTCCGTTATACAGCAGTCCTTTTTTAAGAAACAAAGAAAAACGCAAACAAAACACTCACCATGTGCACGTATTTATCCCTGTGAACTTATATGAATGCACACGTAACATGCATCTAACTGTATTATATAGTGTCATCTAGATTTCAAAAAATTTTCAATATGCTTAGGACTTATTCGTTTCAAAGGAATTGTAAAGGAAAAGTATAGGAATAGGCAATCCTTTGAAATGGACACTATACTGTCATTCGTTTCAAAGGAATGCACCAAAGGAAAAATTCCTATCCCTCCACTTTTTTAGGGAAAACAAAGGAAAAAAATAATCCACTCCAACCCAATGTTTTCAATCCTTTGGATTGTTTGCTACACAACCATAGAAAATTTTTTTATGTTTTTCAATCCTTAAGTTTATACATGTATTTCTATACTATTTCTATGTTTTCTTTATTCCTATGTTTTAAAAATCCTATAAACCGAATAAGCTATTAATTTGGTCTGGTTCCAATGCCATCCTATATGCAGATATTGACGTATGTGCTCCTGGAAATGACGGGTGTCCGGACGGGATGATTTGCAGTAATTTTCCCGGCGGACACAACTGCTCGTGTCCAGAAGGAGAGCACAAGAGCAACAAGAGTGGAGTACTCATCTGCGAGCCGGACCTGAAACGATCTTTGCCGGACCTGAAATTTAAACAATCTTACCGGCTCCCGGTCTCAGCGATCATAGCTATCGGTACGTAACAAAAATGCAATTGAGCAAATTTTTTTTTTCAGAGATGGGTATATTTTTTACCCGGCCTCTATATTCAGCCGGATATATGCAGTCATTTAAATTAGAAATTTAGCCTATCGAATATAAAACTTAGCCCTTAAATAAAAATTTGCTCCCATAGAGATTTGACTCAGAATCTTAGGGTGCTACTCATATCACTATAACCATTAGGCTACATGCACTTTCACAAATACAATTGAGCATGCCCCGTCATCATCTACTCTAATATATGCACGCACAGCTAGCACGCATGGACTTCAATAAGTTCGATAATTTTTATATGCTTAATTCAATATAGAATATATTGTGGTCAAATTTGTATTTTGAAAAGCGCAAAAAAAGTCAAACATGATGTATATACATATAAAGTATTTCAAGCGTAACTTAGAGCAAGTTTAACAGTATAGCCAACCACTAACTTCAAATTATCTATAGTCAATTTAATAGCTAACTCATACACATAGTTACCAATAAATATATACTGCATTAGTAATATGTGGTTCCACCTATCATATACATATTGTATCTTGTAGTTTGTGATACAGCTGACTATAAATCTGTAACCCGCTACTTTCTCTTCTTATTTCTCTTCTCGATATATGTTTATAGCTACTATTTTATAGTCTGCTATTGTACTTGCTCTTAGACTATCATATTTTTCCCTCGTAAACAGGCGTCACCGGTGGCATCGCTATCATCGTGATGAGCATCCTGAGTTCATACCTAGTACACCAGCGAAGAGCGCTTGCCGACATCAAGCGCAGCTACTTCAAGCGACATGGCGGCCTGCTTCTGTACGAGGAGCTGAACGCGAGGAAGAGCAACGCGTTCACCATATACACCGAGGAGCAGCTCGAGCATGCGACCAACGGCTTCGACGAGAGCAACGTCCTCGGCCGCGGCGGCCACGGCACCGTGTACAAGGGGTGGGTGGCTGCAGCCTCCGATGACCTCGTCGTCGCCATCAAGCGGTGCAAGCTAATGGACGAGAGGAACAAGAAGGAATTCGGGAAGGAGATGCTGATCCTCTCCCAGGTCAACCACAAGAACATCGTCAAGCTACTCGGCTGCTGCCTCGAGGTCGACGTCCCCATGTTGGTCTACGAGTACGTCCCCAATGGCACCTTGTACCAGCTCATCCATGGCGGATCTGCCGGCGCCATCTCCTTCGCTTCCCGTCTCCGGATCGCCCACGAGTCGGCGGAGTCACTCTCGTACCTGCACTCCTTCGCGTCGCCGCCGATCCTCCATGGCGATGTCAAGACCTCCAACATCCTCCTCGACGAGAGCTTCATGGCGAAGGTGTCCGACTTCGGCGCCTCCATCTTGGCTCCCACTGACGAAGCCCAAATGATGACCATGGTGCAGGTGAGAAACGCCCAAAGGTTTTTCGGCTAGCTCCACAAGGTGGTGGGTTAGACGACCTGAGTTCAAAGCCTCACCCTTTCTAATTACTCCCTCCGTTTCAAAATGTTTGACACCGTTGACTTTTTAGCATATGTTTGACCGTTCGTCTTATTCAAAAAATTTTGTGAAATATGTAAAACTATATATGTACATGAAAGTATATTTAACAATAAATCAAATGATATGAAAAGAATAAATAATTACTTAATTTTTTTAACATTAGGTTCTTTCCTAATATTCGTGTCATTTTTTTACCATGGTGCAGGGGACGTGCGGTTACCTCGACCCAGAGTACATGCAGACATGCCAGCTCACGGAGAAGAGCGACGTGTACAGCTTCGGCGTTGTCCTGCTCGAGCTGCTCACCGGCAAGAAGCCGCTCTGCCTCGACGGGCCGGATGAGGGGCGAAGCTTGTCGGCGAGGTTCTTGGCCGCCATGAGGGAGAACAGAGCCGATTTGATACTGGATGAGCAGGTGAAGAGCGAGGCGAGCGGTGAGTTGCTGGAGGAGATCACGCTGCTGGCTCTGGAGTGCCTGCAGATGTGCGGCGGCGACAGGCCGGCGATGAAGGAGGTCGCCGAGAGGCTGGGCGGACTGCGGAAGCTGCACCAGCATCCATGGACGCAGGACGTCGTCGAGCTCGACGAGGTGCGGTGTTTGCTCAGCGACTCGCCGGAAAGTATCAGTTTTGAAGTGGACGCCACCAGTAGTAGCGGATACTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA020567