BGIOSGA020569

From RiceWiki
Revision as of 12:48, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA020569| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA020569, complete gene.| tag = OsI_243...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA020569

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA020569, complete gene.

LocusTag

OsI_24392

Ensembl Transcript ID

BGIOSGA020569-TA

Ensembl Protein ID

BGIOSGA020569-PA

Length

4880

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:31656535..31661414

Sequence Coding Region

31659306..31661414,31658729..31658874,31656535..31658329

Genome Context

<gbrowseImage1> name=IndicaChromosome06:31656535..31661414 source=RiceIndica06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome06:31656535..31661414 source=RiceIndica06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGCCGCCGGTGCCATGGCCGACGCCGCGCACCGTCCGGCAAGCCGCCGAGCTCCACGCCCACCTCACCACCTCCGGCCGCCTCCTCCACCCGCCATCCGCCCACCACCTCCTCAACTCCCTCGTCAACTGCCTGCCCCCATCCGATCCCCTCCACCTCCGCTACGCCCTCCACCTGTTCGACCGAATGCCCGCCTCCACCTTCCTCTTCGACACCGCCCTCCGCGCCTGCTTCCGTGCCGGGACCTCGTCGGGAGACCCGGACATCCCCTTCGTCCTCTTCCGCCGGATGCGCCGCGCGGCCGTCCGACCAGACGGGTTCACGTTCCACTTCCTTTTCAAGTGCTCCTCCTCCTCCCGCCCCCGCGCCCTCCTGTGCACGATGCTGCACGCCGCCTGCCTGCGGACCATGCTACCGTCTGCCGCGCCGTTCGTCGCGAATTCTCTCATCCATATGTACACTGAGCTTGGGCTTGCTGGCGATGTTCGACGGGCTTTTGACGAGATCCCTGTGAAGGACGCGGTTTCCTGGACAATGGTGATCAGTGGGCTGGCCAAAATGGGCATGCTTTCTGATGCGCGGCTCCTTCTGGCTCAGGCTCCAGTGAGGGATGTGATCTCGTGGACAAGTTTGATTGCTGCCTATTCTCGTGCTGATCGGGCCAAAGAGGCTGTTGATTGCTTCAAGAACATGCTTTCTGAAGGCATTGCACCGGATGATGTTACTGTTATTGGCGTGCTCTCAGCATGCTCACAGCTCAAGGATTTGGAGCTGGGCTGTTCACTGCACTCGCTTGTTAAGGAGAAGGGGATGTCGATGAGTGAAAATCTTGTCGTTGCGCTCATTGACATGTATGCGAAGTGTGGTGACTTTGGTCATGCACGAGAGGTTTTTGATGCTGTGGGTAGAGGCCGAAGACCTCAGTCATGGAATGCTATAATTGATGGATACTGCAAGCATGGCCATGTTGATGTTGCACGGTCTCTGTTTGATCAAATGGAGGTCCGTGATATCATCACATTCAACTCAATGATCACTGGGTACATCCACAGCGGCCAGCTTAGAGAGGCGTTGCTATTGTTCATGAATATGAGGAGACATGATCTGCGTGTTGACAACTTTACGGTGGTGAGCCTTCTATCTGCTTGTGCAAGCTTAGGTGCATTACCACAGGGCAGGGCATTACATGCTTGCATTGAGCTGAGGCTGGTGGAAACAGACATATACATTGGTACTGCACTGCTGGACATGTACATGAAATGTGGGAGGGTCAATGAGGCAACCATTGTTTTCCAACGTATGGGCAAGAGAGATGTTCACGCTTGGACTGCTATGATCGCAGGTCTCGCATTCAATGGGATGGGTAAGGCTGGTCTGGAATATTTCTACCAGATGAGGTGTGACGGCTTCCAGCCTAATCCAGTTAGCTACATTGCTGTTTTGACTGCATGCAGCCACTCATGTCTATTGAACGAAGGCCGCCTGTACTTTGATGAGATGAGAATCTTGTACAACATACATCCTCAGATTGAGCACTATGGCTGCATGATTGATTTGCTGGGACGCAGTGGGCTTTTGGATGAAGCAATGGATCTTGTTAAGACCATGCCCATGCAACCGAATTCTGTCATATGGGCATCCATCTTGAGTGCTTGCAGAGTCCATAAACGCATAGACTTAGCTCAATGTGCCGCTGAGCATCTTCTGAAGATAGAACCTGACGAGGATGCTGTCTATGTCCAGTTATATAACATATGCATAGACTCTAGAAAATGGGAAGATGCGTCAAAGATAAGGATGTTGATGGAAGAAAGGCAAGTTAAGAAAACTGCAGGTTATAGTTCTGTTACTGTGGCTGGGCAGGTGCACAAGTTTGTAGTTAGTGACAAATCACATCCACGGATATTGGAGATCATCGCAATGCTAGAGGAGATCTCACACAGGTTAAAGTCAGCAGGCTATTCGCCGATTACATCACAGGTAACAGTGGATGTCGATGAGGAAGAGAAAGAACAGACACTGCTAGCACACAGTGAGAAGCTAGCCATTGCTTTTGGCCTCGTTAGTCTAGCACCAAACTTGCCGGTTCATATCATAAAGAATCTCAGGCCAACTATCTTCAGGCCTTTAGGGGCAGACGACGGAAAGCAAAAGCAGCCAGACAGAAGGGTCGTCTTCCTCCTGCCGCCCAGCCGCCGTGATGCTCCTGTGCTCGTACGCCCAATCCCGTCGTCCCCGGCTCCCTTCTCACTGAGATCGTCTGTGACCATGGCTGTCCGAGACGTCGCGTCCTTGAACCGTATGATCACAGGCTTCATCAGGGACGGCCTTGCTGATCGGGCCCGTGCTGTCTACAGGTGGATGGTCGCTTCAGGCATCAGGGAGACCCCTCATACCTTCTCTACAATCCTGGGAGTGTGCAGCACTTACGAGGCACTGCAACTCCATGGCCGGGTGCTGGCCCTAGGCTTGTGTTGCAATCCATTTGTTGGATCTGCGCTTGTTAATCACTATATGCATGTCGAATCACCACATGCTTCCCTCTCATTGTTCCGGGAACTGCCGCTGCAGAACACAGCCATGTGCAATGTGGTACTGCGTGGCTTGGGCAACCTGAAGCTGACTGAAGAACTTATCTGCTGCTTTCTTGATATGAGACGGCAGTATTTGGAGCTGAATGGCTTATCCTATTGTTATGCCATGAAAGGGTGCTATCAAAATGGTGAATGGCTAGAACAAGGCAGGCAACTCCATGGAGTTGTTCTCAAGGCTGGGTGGATTCCATCCAACATTTTCCTGTCAAATTCTCTTGTAGATCTTTACTCTGCAATTGGAGATTCAGTGGACACAGTGAAGGCACTGAATGATATCCTGTCTGAGGATGTCATCTCATGGAACTCCATTTTATCAATGTACGCTGACAGAGGACATATGAAGGAAGCAGTTTATTACTTGAAACAGATGCTTTGGCATGGCAAGATGCCTTCAATTCGCTCATTTGTTTCGCTCCTTGCTTTGTCTGGCAAAACGGGGGACTGGCAACTCGGAGTTCAGATACATGGCATTGTTCATAAGCTTGGATTCAGTTGTAGTAGTGTGCATGTTCAGACTACGCTCATTGATATGTATGGGAAGTGTTGCTGTTTTGATCATTCATTAGCAATATTCAATGAAATTCCAAGTATTGCACTGGAGTGCTGCAATTCTCTGATCACATCATCGCTTCGCTGCAACATGTTTGATGCTGCTTTAGAGATATTGCATTGTATGATTGTAGAGGGAGTGACACCTGATGATGTGACTTTCTCTGCAACTATGAAAGCCATATCTTTGTCAGCTTCACCAAGTTTAACCAGTTGTCAAATGCTACATTCTTGTCTTGTTAAATTGGGATTTGAAATGGACATGGCTGTGTGCTCCTCCTTGATCACTGCTTATGCCTGCGCTGGTCAACTGAGCAGTTCACACTTGATATTTGAAGGATTGTTGGATCCAAATGTGATATGCTTCACTGCTATAATATCTGCCTGTGCTCGATATGGAGATGGAGCACGAGCAATGGAGCTATTCGATCAGATGGTTTCTAGTGGCCTGAAGCCTGACAATGTTACCTTTCTATGTGCAATTGCAGGATGTGATCAGGCAGGAATGTTTGAAGAAGGACGGCTGGTGATTGAACTCATGAGAGCTAGCCGTGAGCTGGATCCTGATGAAAGACATTTTGCTTGTATGGTCAACCTTCTCAGTCGAGATGGTTTTGTGAAGGAAGCAATGGAAATGATGGAACAGTCCCCATTGAGACACTACACCAAGGCATGGAGCTCACTTCTTCAGAGCTGCAAAGCACATGGTGAAAATGTGCTGGGAAAGAGAGCTGCCAACATGCTGATAGATGTAGGGAGAAAAGATCCAGCCACCACTTTGCAGGTATCAAATTTTTTCAATGATATTGGGGACAGAGAAACTGCTTTAAGGATTAAAGAGATGACAAATGTGAAGGAAGTGAAGAAGAGCGGTCACAGCTTAATTGAGGTCAGTCACCGAGCTTAG</cdnaseq>

Protein Sequence

<aaseq>MPPVPWPTPRTVRQAAELHAHLTTSGRLLHPPSAHHLLNSLVNCLPPSDPLHLRYALHLFDRMPASTFLFDTALRACFRAGTSSGDPDIPFVLFRRMRRAAVRPDGFTFHFLFKCSSSSRPRALLCTMLHAACLRTMLPSAAPFVANSLIHMYTELGLAGDVRRAFDEIPVKDAVSWTMVISGLAKMGMLSDARLLLAQAPVRDVISWTSLIAAYSRADRAKEAVDCFKNMLSEGIAPDDVTVIGVLSACSQLKDLELGCSLHSLVKEKGMSMSENLVVALIDMYAKCGDFGHAREVFDAVGRGRRPQSWNAIIDGYCKHGHVDVARSLFDQMEVRDIITFNSMITGYIHSGQLREALLLFMNMRRHDLRVDNFTVVSLLSACASLGALPQGRALHACIELRLVETDIYIGTALLDMYMKCGRVNEATIVFQRMGKRDVHAWTAMIAGLAFNGMGKAGLEYFYQMRCDGFQPNPVSYIAVLTACSHSCLLNEGRLYFDEMRILYNIHPQIEHYGCMIDLLGRSGLLDEAMDLVKTMPMQPNSVIWASILSACRVHKRIDLAQCAAEHLLKIEPDEDAVYVQLYNICIDSRKWEDASKIRMLMEERQVKKTAGYSSVTVAGQVHKFVVSDKSHPRILEIIAMLEEISHRLKSAGYSPITSQVTVDVDEEEKEQTLLAHSEKLAIAFGLVSLAPNLPVHIIKNLRPTIFRPLGADDGKQKQPDRRVVFLLPPSRRDAPVLVRPIPSSPAPFSLRSSVTMAVRDVASLNRMITGFIRDGLADRARAVYRWMVASGIRETPHTFSTILGVCSTYEALQLHGRVLALGLCCNPFVGSALVNHYMHVESPHASLSLFRELPLQNTAMCNVVLRGLGNLKLTEELICCFLDMRRQYLELNGLSYCYAMKGCYQNGEWLEQGRQLHGVVLKAGWIPSNIFLSNSLVDLYSAIGDSVDTVKALNDILSEDVISWNSILSMYADRGHMKEAVYYLKQMLWHGKMPSIRSFVSLLALSGKTGDWQLGVQIHGIVHKLGFSCSSVHVQTTLIDMYGKCCCFDHSLAIFNEIPSIALECCNSLITSSLRCNMFDAALEILHCMIVEGVTPDDVTFSATMKAISLSASPSLTSCQMLHSCLVKLGFEMDMAVCSSLITAYACAGQLSSSHLIFEGLLDPNVICFTAIISACARYGDGARAMELFDQMVSSGLKPDNVTFLCAIAGCDQAGMFEEGRLVIELMRASRELDPDERHFACMVNLLSRDGFVKEAMEMMEQSPLRHYTKAWSSLLQSCKAHGENVLGKRAANMLIDVGRKDPATTLQVSNFFNDIGDRETALRIKEMTNVKEVKKSGHSLIEVSHRA</aaseq>

Gene Sequence

<dnaseqindica>1..2109#2541..2686#3086..4880#ATGCCGCCGGTGCCATGGCCGACGCCGCGCACCGTCCGGCAAGCCGCCGAGCTCCACGCCCACCTCACCACCTCCGGCCGCCTCCTCCACCCGCCATCCGCCCACCACCTCCTCAACTCCCTCGTCAACTGCCTGCCCCCATCCGATCCCCTCCACCTCCGCTACGCCCTCCACCTGTTCGACCGAATGCCCGCCTCCACCTTCCTCTTCGACACCGCCCTCCGCGCCTGCTTCCGTGCCGGGACCTCGTCGGGAGACCCGGACATCCCCTTCGTCCTCTTCCGCCGGATGCGCCGCGCGGCCGTCCGACCAGACGGGTTCACGTTCCACTTCCTTTTCAAGTGCTCCTCCTCCTCCCGCCCCCGCGCCCTCCTGTGCACGATGCTGCACGCCGCCTGCCTGCGGACCATGCTACCGTCTGCCGCGCCGTTCGTCGCGAATTCTCTCATCCATATGTACACTGAGCTTGGGCTTGCTGGCGATGTTCGACGGGCTTTTGACGAGATCCCTGTGAAGGACGCGGTTTCCTGGACAATGGTGATCAGTGGGCTGGCCAAAATGGGCATGCTTTCTGATGCGCGGCTCCTTCTGGCTCAGGCTCCAGTGAGGGATGTGATCTCGTGGACAAGTTTGATTGCTGCCTATTCTCGTGCTGATCGGGCCAAAGAGGCTGTTGATTGCTTCAAGAACATGCTTTCTGAAGGCATTGCACCGGATGATGTTACTGTTATTGGCGTGCTCTCAGCATGCTCACAGCTCAAGGATTTGGAGCTGGGCTGTTCACTGCACTCGCTTGTTAAGGAGAAGGGGATGTCGATGAGTGAAAATCTTGTCGTTGCGCTCATTGACATGTATGCGAAGTGTGGTGACTTTGGTCATGCACGAGAGGTTTTTGATGCTGTGGGTAGAGGCCGAAGACCTCAGTCATGGAATGCTATAATTGATGGATACTGCAAGCATGGCCATGTTGATGTTGCACGGTCTCTGTTTGATCAAATGGAGGTCCGTGATATCATCACATTCAACTCAATGATCACTGGGTACATCCACAGCGGCCAGCTTAGAGAGGCGTTGCTATTGTTCATGAATATGAGGAGACATGATCTGCGTGTTGACAACTTTACGGTGGTGAGCCTTCTATCTGCTTGTGCAAGCTTAGGTGCATTACCACAGGGCAGGGCATTACATGCTTGCATTGAGCTGAGGCTGGTGGAAACAGACATATACATTGGTACTGCACTGCTGGACATGTACATGAAATGTGGGAGGGTCAATGAGGCAACCATTGTTTTCCAACGTATGGGCAAGAGAGATGTTCACGCTTGGACTGCTATGATCGCAGGTCTCGCATTCAATGGGATGGGTAAGGCTGGTCTGGAATATTTCTACCAGATGAGGTGTGACGGCTTCCAGCCTAATCCAGTTAGCTACATTGCTGTTTTGACTGCATGCAGCCACTCATGTCTATTGAACGAAGGCCGCCTGTACTTTGATGAGATGAGAATCTTGTACAACATACATCCTCAGATTGAGCACTATGGCTGCATGATTGATTTGCTGGGACGCAGTGGGCTTTTGGATGAAGCAATGGATCTTGTTAAGACCATGCCCATGCAACCGAATTCTGTCATATGGGCATCCATCTTGAGTGCTTGCAGAGTCCATAAACGCATAGACTTAGCTCAATGTGCCGCTGAGCATCTTCTGAAGATAGAACCTGACGAGGATGCTGTCTATGTCCAGTTATATAACATATGCATAGACTCTAGAAAATGGGAAGATGCGTCAAAGATAAGGATGTTGATGGAAGAAAGGCAAGTTAAGAAAACTGCAGGTTATAGTTCTGTTACTGTGGCTGGGCAGGTGCACAAGTTTGTAGTTAGTGACAAATCACATCCACGGATATTGGAGATCATCGCAATGCTAGAGGAGATCTCACACAGGTTAAAGTCAGCAGGCTATTCGCCGATTACATCACAGGTAACAGTGGATGTCGATGAGGAAGAGAAAGAACAGACACTGCTAGCACACAGTGAGAAGCTAGCCATTGCTTTTGGCCTCGTTAGTCTAGCACCAAACTTGCCGGTTCATATCATAAAGAATCTCAGGGTATGTGAGGACTGCCACTCTGCAATCAAGTTGATCTCCAGGCTTTGGAATCGGGAAATCATAGTCAGAGACCGGAGTAGGTTCCACCACTTCAGAGAGGGGGCATGTTCTTGCAACGATTTTTGGTAAATACCATTTTATAGTACTCCATGTTTTTGGTGAAAAAGCTGAGGTTTAGGAACATTGTAAACTGGAGTTGTTCGCATTAGTTTGGAATTGCACTTGAATTTCTGATCAACAAAGGTACTCTTTCTTCTCCTTAATTACACTCTGGTTGTCATGTTGATACTCTGTTACCAGTAATATGCGTTTTCAGGAAAAAGAGGTCGGCTGTGTGCCTGTGTCACTGAAAGCTTCACAGCAGTGCTGCTCTCAGTTCAATCCTCAGGGTTGGTAGTTGATGGGCTTTGTGGGCTTTTTGGATGGGCCAGCCAACTATCTTCAGGCCTTTAGGGGCAGACGACGGAAAGCAAAAGCAGCCAGACAGAAGGGTCGTCTTCCTCCTGCCGCCCAGCCGCCGTGATGCTCCTGTGCTCGTACGCCCAATCCCGTCGTCCCCGGCTCCCTTCTCACTGAGGTAAAAATCCAATCTTGCCGGCTCACCCCCCTCCGCCTAAAAGGAGGAGCAGTTCGTTCTTCTGTTTCCCAAGTTGGATTGCGCTTTTCTTTTGTTTTATTTTTTCCCCTGATGTCTTCTGTATGTGGGATACTCAGGATGATGCAGAGATGCCAAACGAAAGAGATCCGTTCCGACGACGGTTGGTGATGGCGGCGGCAGTGATGAAGCCACCGAGTTGATAAATGATGCGGTTCTTCGTAAGGAATACTACTGCTGTTTCTCTTCACTGGGGGAACTCGCTGTTAGCTGATGGAAACTGGAAGTATGGAACAGTGTCACCTGCTCCGGAAATTCTTCTGAACTGGCCTTCTCCCCTTCGCATTCCTCTTTGTTTGACCCATCATAGTCTGTGGAAAGATCGTCTGTGACCATGGCTGTCCGAGACGTCGCGTCCTTGAACCGTATGATCACAGGCTTCATCAGGGACGGCCTTGCTGATCGGGCCCGTGCTGTCTACAGGTGGATGGTCGCTTCAGGCATCAGGGAGACCCCTCATACCTTCTCTACAATCCTGGGAGTGTGCAGCACTTACGAGGCACTGCAACTCCATGGCCGGGTGCTGGCCCTAGGCTTGTGTTGCAATCCATTTGTTGGATCTGCGCTTGTTAATCACTATATGCATGTCGAATCACCACATGCTTCCCTCTCATTGTTCCGGGAACTGCCGCTGCAGAACACAGCCATGTGCAATGTGGTACTGCGTGGCTTGGGCAACCTGAAGCTGACTGAAGAACTTATCTGCTGCTTTCTTGATATGAGACGGCAGTATTTGGAGCTGAATGGCTTATCCTATTGTTATGCCATGAAAGGGTGCTATCAAAATGGTGAATGGCTAGAACAAGGCAGGCAACTCCATGGAGTTGTTCTCAAGGCTGGGTGGATTCCATCCAACATTTTCCTGTCAAATTCTCTTGTAGATCTTTACTCTGCAATTGGAGATTCAGTGGACACAGTGAAGGCACTGAATGATATCCTGTCTGAGGATGTCATCTCATGGAACTCCATTTTATCAATGTACGCTGACAGAGGACATATGAAGGAAGCAGTTTATTACTTGAAACAGATGCTTTGGCATGGCAAGATGCCTTCAATTCGCTCATTTGTTTCGCTCCTTGCTTTGTCTGGCAAAACGGGGGACTGGCAACTCGGAGTTCAGATACATGGCATTGTTCATAAGCTTGGATTCAGTTGTAGTAGTGTGCATGTTCAGACTACGCTCATTGATATGTATGGGAAGTGTTGCTGTTTTGATCATTCATTAGCAATATTCAATGAAATTCCAAGTATTGCACTGGAGTGCTGCAATTCTCTGATCACATCATCGCTTCGCTGCAACATGTTTGATGCTGCTTTAGAGATATTGCATTGTATGATTGTAGAGGGAGTGACACCTGATGATGTGACTTTCTCTGCAACTATGAAAGCCATATCTTTGTCAGCTTCACCAAGTTTAACCAGTTGTCAAATGCTACATTCTTGTCTTGTTAAATTGGGATTTGAAATGGACATGGCTGTGTGCTCCTCCTTGATCACTGCTTATGCCTGCGCTGGTCAACTGAGCAGTTCACACTTGATATTTGAAGGATTGTTGGATCCAAATGTGATATGCTTCACTGCTATAATATCTGCCTGTGCTCGATATGGAGATGGAGCACGAGCAATGGAGCTATTCGATCAGATGGTTTCTAGTGGCCTGAAGCCTGACAATGTTACCTTTCTATGTGCAATTGCAGGATGTGATCAGGCAGGAATGTTTGAAGAAGGACGGCTGGTGATTGAACTCATGAGAGCTAGCCGTGAGCTGGATCCTGATGAAAGACATTTTGCTTGTATGGTCAACCTTCTCAGTCGAGATGGTTTTGTGAAGGAAGCAATGGAAATGATGGAACAGTCCCCATTGAGACACTACACCAAGGCATGGAGCTCACTTCTTCAGAGCTGCAAAGCACATGGTGAAAATGTGCTGGGAAAGAGAGCTGCCAACATGCTGATAGATGTAGGGAGAAAAGATCCAGCCACCACTTTGCAGGTATCAAATTTTTTCAATGATATTGGGGACAGAGAAACTGCTTTAAGGATTAAAGAGATGACAAATGTGAAGGAAGTGAAGAAGAGCGGTCACAGCTTAATTGAGGTCAGTCACCGAGCTTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA020569