BGIOSGA020570

From RiceWiki
Revision as of 12:48, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA020570| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA020570, complete gene.| tag = P0018H0...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA020570

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA020570, complete gene.

LocusTag

P0018H04.12-1

Ensembl Transcript ID

BGIOSGA020570-TA

Ensembl Protein ID

BGIOSGA020570-PA

Length

2382

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:31652947..31655328

Sequence Coding Region

31655305..31655328,31654747..31654852,31654120..31654302,31653298..31653765,31653112..31653195
,31652947..31652951

Genome Context

<gbrowseImage1> name=IndicaChromosome06:31652947..31655328 source=RiceIndica06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome06:31652947..31655328 source=RiceIndica06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGTCAGGAGCGGACGTCGACAAGGTCCAGAATCTTATCCATTGCTGCCTTCAGCTATACATGGACAAGAAAGAAGTTGTTGATGCCCTTTCCCGTGAGGCAAAAATAGAACCTAGTGTTACACAGCATGTTTGGCAGAAACTCGAGGAGAATAATCGTGAGTTTTTCAAAGCATACTATTTGAGGTTGATGCTTAAGAACCAAATAACAGCCTTCAACAAACTTCTTGAGGACCAGTTAAGGATTATAAATAAAGATTATCATCCAGGGCCTTCTTCTATGCCTCTTCCCAATGGTTCCAACTCAAACCTATTGAAGCAAAATCCATGCTTTTTATCAGAGTCTACTCCGATGCCTGCAATGCCAGATGATGTAATGTGCAATGGAAATTCCAGTGGCATAGTAGATTGCACACAATCCAGCGATCAATTAATTTATGCTGGTAAAGACATTCAGGGCCTTCATAGTAGCATGGATGCTTCCAATTTGCTTCCAGTGCAGAATGCTAATTCTGTGCTGTTTGGTGTGGAAAATGGGACGACTATTAAGACGGAATCAGGCTATTCGAGCAATGGTAATTTTGGTTTCTGCGGGAATGCTTTCCTGGAATCATGCCAGTCAATAGGTGATGCATCTGGTGGATCCTTTAGCAGTTCAGAGTTGAATGGGCAACCTCTGGATGATTCAATTTTGGATATTGAATCATCATCGTTTGGCTTCTTGAGTCAGCTTCCCCGAAATTTTTTTTCAGACCTACCAGAGGATTTCAGTCAAAGCACAGAAATATTAGACAATTATGGCAAGTCACCGTTCCTCCCTTCTGAGCAAAATAACTTTTCAGATTCTACAGGTGGTGAACACACAGGTTGA</cdnaseq>

Protein Sequence

<aaseq>MSGADVDKVQNLIHCCLQLYMDKKEVVDALSREAKIEPSVTQHVWQKLEENNREFFKAYYLRLMLKNQITAFNKLLEDQLRIINKDYHPGPSSMPLPNGSNSNLLKQNPCFLSESTPMPAMPDDVMCNGNSSGIVDCTQSSDQLIYAGKDIQGLHSSMDASNLLPVQNANSVLFGVENGTTIKTESGYSSNGNFGFCGNAFLESCQSIGDASGGSFSSSELNGQPLDDSILDIESSSFGFLSQLPRNFFSDLPEDFSQSTEILDNYGKSPFLPSEQNNFSDSTGGEHTG</aaseq>

Gene Sequence

<dnaseqindica>1..24#477..582#1027..1209#1564..2031#2134..2217#2378..2382#ATGTCAGGAGCGGACGTCGACAAGGTCTGTCGTTAGGACATACAGCTGATCGTCAGTAGTAGTTCAGTGCCTTGTTTGGTTCATGTAGAACGCTTGTTGATTCTTGTTGGGTTTTGCTACTGAATTCGTTGGTTCTTGGCCTCTTCGCAGAGGATACAGTGCCACTCAAGTTTGATTTGCGTGCTTATAGTGACAGTGCCATTCTAGGGTTTGTGATCACCTGCCAATTAGTTAGTAGGGTAGGGATAATCTCGGATTGTGATACCTAGTAGGGTTCTAATTACTTGTTCAGCCTGCAATGCATGCAAGCACACAAGGTCCGTGTTATGGATATTCTTTGCATTCGTTTATGCTGAATCATGCTTAGAAACTACGTTTGGATAACACACAGTTTATTTTATGTGTAGCATGCTTGAACAATTAATACATATTCAATTGAGCTGATGGATAACTCTTGTTGCTAACTTTTGTTCCAGGTCCAGAATCTTATCCATTGCTGCCTTCAGCTATACATGGACAAGAAAGAAGTTGTTGATGCCCTTTCCCGTGAGGCAAAAATAGAACCTAGTGTTACACAGCATGGTAGTGCTCTTACCTTGTATGCCAAAAGTTTCATTTAGCTTACTTGCAAGTTGGTCTTAGGTTTCAGAACTGGCTAGTAACAGCGCAGGTCATGCATAGTTGGATGGGTTGCTATCTTGTTACAATTATGATTGTGGAATTGTGACATATGCTGGTTCACACAACACAAATATGGTTTAGGTAAAAAACCATGTCATCAATTTTGCAACAAACACTGTTATATGCTGCCTAAATATTCTTTTTTCCGTCCCCTCTACGAACCTACTTTATGTTTCAGGAGGGCTCTGTCAAACAGAAAGGGAACATAACTAGGAAACCGTTTATGTTTATCTTGATTTGCGCCCTTTTATTATTGTTAGATCATTTTTGTTGTTAACATCTGGTTGATTTTCTTTTTGTAGGCTGTTGTTAACATCTGGTTGATTTTCTTTTTGCTCTTTCCAGTTTGGCAGAAACTCGAGGAGAATAATCGTGAGTTTTTCAAAGCATACTATTTGAGGTTGATGCTTAAGAACCAAATAACAGCCTTCAACAAACTTCTTGAGGACCAGTTAAGGATTATAAATAAAGATTATCATCCAGGGCCTTCTTCTATGCCTCTTCCCAATGGTTCCAACTCAAACCTATGTAAGGCATTTTTTTCAGACTTAAGCTTCTAGCAATGACTGATATGAGCATAACTGGAGTAGTAATGCAATACCCCATTGTTTAAGTGAGTGTATAATGGTGAACAAATAATTAGTTCTTTGGGAGCCTGAAGAATTTAATGTTTCTGAAAATGATCTTTTCCAAGTGTAAGCTCAGGAAGTTTGTGTTTATTAGGTGAGCACAACACGGTTGCTCAAGAGAAAGATATTTGCTTGCCTTTACTTTCCATTCTTTATTTTCTTTGTTTGCAGGGCTAGGCATTTAGTTGAGTACAGACTGTCCTCTTACGGGGTTGTTTCATTTTAATATGGCCTTCTGTTTTCCTTGTTTCAGTGAAGCAAAATCCATGCTTTTTATCAGAGTCTACTCCGATGCCTGCAATGCCAGATGATGTAATGTGCAATGGAAATTCCAGTGGCATAGTAGATTGCACACAATCCAGCGATCAATTAATTTATGCTGGTAAAGACATTCAGGGCCTTCATAGTAGCATGGATGCTTCCAATTTGCTTCCAGTGCAGAATGCTAATTCTGTGCTGTTTGGTGTGGAAAATGGGACGACTATTAAGACGGAATCAGGCTATTCGAGCAATGGTAATTTTGGTTTCTGCGGGAATGCTTTCCTGGAATCATGCCAGTCAATAGGTGATGCATCTGGTGGATCCTTTAGCAGTTCAGAGTTGAATGGGCAACCTCTGGATGATTCAATTTTGGATATTGAATCATCATCGTTTGGCTTCTTGAGTCAGCTTCCCCGAAATTTTTTTTCAGACCTACCAGAGGATTTCAGTCAAAGCACAGGTACATTCTAATGACAATATTGATTTATTTTGCTTTCTGATTTGAGTACCATTTTTCTTTCCTCATACTTTTGTTTGCTCTCCACATTTACTTATCTTGCAGAAATATTAGACAATTATGGCAAGTCACCGTTCCTCCCTTCTGAGCAAAATAACTTTTCAGATTCTACAGGTGGTGAACACACAGGTAATCATTCTTCCCACCCCTCTTTTTCCTGTTCACAGTTAGCCATAACAATAGTGCATACCACCACCTTATGCTTGTGTGGTAGTACTTTATCAATCAAAGAATATGATGTTTTCTTGTATGGCTGATCTTTGCAATGGCATTCACCTTGTGTTTGCAGGTTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA020570