BGIOSGA020573

From RiceWiki
Revision as of 12:48, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA020573| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA020573, complete gene.| tag = P0018H0...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA020573

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA020573, complete gene.

LocusTag

P0018H04.3

Ensembl Transcript ID

BGIOSGA020573-TA

Ensembl Protein ID

BGIOSGA020573-PA

Length

3968

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:31617072..31621039

Sequence Coding Region

31620317..31621039,31619533..31619745,31619217..31619421,31619022..31619097,31618778..31618913
,31618562..31618666,31618380..31618457,31617994..31618083,31617841..31617906
,31617548..31617604,31617382..31617459,31617255..31617302,31617072..31617143

Genome Context

<gbrowseImage1> name=IndicaChromosome06:31617072..31621039 source=RiceIndica06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome06:31617072..31621039 source=RiceIndica06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCCGCCGCCATCGTGGCCGCGCGGGCGCCTCCGGGCGGCGGCGGCGCCGCAGCCGTCATCGCGTACCACCACTGCGCGTCCCCCTCGCGGGCGCTCCCGCTGGCGGCCGGCCCGTCCGCGGGAGGAGGGGTGGTGGTGGGGAGGAGATACCACCACCACGGCGGCGCGTGCTGCTTCGCCGCAAAGCCCACGCAGGTGGCCGCCGAGGTGGATCAGGGAGGGGCGGCCGAGCCGGGTGTCGCTTCCGCCAATGCTGCGGTGGAGGCGAAGCCGCGTAAGAAGGCGCGATCCCGGCGAGGAAGGAAGGGGAAAAGGTCGTCGTCGTCGGAGACCAGGACGACGGCGGTGCTCGAGGAGGAGGAGGAGGTGGAGGTGAAGGAGAAGAAGACGGAGGAGGATGGAGAGGAGGGGAAGAGGAAGGAGAAGGCGGCGGGGCTTGACCTGGACGAGGTGATGGCGGTGAGCCCCGTGGGGCTAGGGCGGCGGTCGCGGCAGATATTCGACGAGGTGTGGCGCAAGTTCTCGCGGCTGGGGCAGATGTCGAGCGCGTCGTCGACGGCGCTGGCGGAGGAGGAGCAGGCCGTGCTCATCCGCGGCGGACCCATGTGCGAGTTCACCGTCCCCGGCGCGCAGGACACCACCGTCCTCGTCGTCGGCGCCACCAGCCGCATCGGCCGCATCGTCGTCCGCAAGCTCATGCTCCGCGGGTACAATGTCAAGGCTTTAGTTAGAAGGAATGATGCTGAAGTGATAGATATGCTCCCAAGGTCGGTGGATATTGTTGTCGGTGATGTTGGTGATCCTTCAACTGTCAAATCGGCTGTATCAGGTTGCAGCAAGATAATCTATTGCGCAACTGCACGCTCAACTATTACTGGAGACCTAAATAGGGTTGATAATCAAGGAGTAAGGAATGTTAGTAAGGCTTTCCAGGATTACTACAATGAATTGGCTCAGCTTAGGGCTGGTAAAAGCAGCAAGAGCAAACTCCTGATAGCAAAATTTAAATCTCCCAAGTCTCTGAATGGTTGGGAGGTGGACCAGGGATCTTATTTTCCAAACACATTTGCTTCTAGGTTTGATGAAGGTATCGATGCATCATTTGACTTTTCAGAGGCTGGTCAAGCTGTTTTCTCAGGATTTGTTTTCACAAGAGGTGGATATGTTGAGATATCAAAAAGGCTATCTCTTCCTTTGGGATCTACTCTAGACAGGTATGATGGCTTACTTTTTTCGGTGGGAGGAAATGGAAGATCATATGTTGTTATTCTTGAGACTGGTCCGCTGGCTGACACCTCCCAGAGCAAGAAGTACTTTGCTCGGATGACTACAAAAGTAGGATTTTGTAGGGTGAGGGTACCATTTTCAGCTTTTCGGCCAGTAAACCCTCAAGATCCTCCCCTAGACCCTTTTCTTGTGCATACACTAACAATTAGGTTTGAACCCAAAAGACAGAGACCTGGTGATGGATCTCAAAGTGCTACTGACCCCAGAAATTTTGAGCTTATATTGGAATACATCAAAGCTTTGCCTACTGGTCAAGAAACAGACTTCATTCTGGTCTCATGCTCAGGTTCTGGGATTGAACCTAACAGAAGAGAACAAGTCCTCAAAGCAAAAAAGGCTGGAGAGGATGCATTGAGAAGGTCAGGCCTTGGATACACAATAGTACGCCCTGGTCCACTGCAGGAAGAACCTGGTGGTCAGCGTGCATTGATCTTTGATCAAGGGAACAGAATCTCGCAGGGTATCAGTTGCGCCGATGTAGCAGATATTTGTGTCAAAGCATTGCATGATTCCACTGCTAGGAACAAAAGTTTTGATGTATGCTACGAGTATGTAGCTGAGCAAGGGAATGAGCTATATGAACTTGTGGCCCATTTACCAGATAAAGCTAACAACTATCTTACACCGGCATTATCTGTTCTAGAGAAGAACACCTGA</cdnaseq>

Protein Sequence

<aaseq>MAAAIVAARAPPGGGGAAAVIAYHHCASPSRALPLAAGPSAGGGVVVGRRYHHHGGACCFAAKPTQVAAEVDQGGAAEPGVASANAAVEAKPRKKARSRRGRKGKRSSSSETRTTAVLEEEEEVEVKEKKTEEDGEEGKRKEKAAGLDLDEVMAVSPVGLGRRSRQIFDEVWRKFSRLGQMSSASSTALAEEEQAVLIRGGPMCEFTVPGAQDTTVLVVGATSRIGRIVVRKLMLRGYNVKALVRRNDAEVIDMLPRSVDIVVGDVGDPSTVKSAVSGCSKIIYCATARSTITGDLNRVDNQGVRNVSKAFQDYYNELAQLRAGKSSKSKLLIAKFKSPKSLNGWEVDQGSYFPNTFASRFDEGIDASFDFSEAGQAVFSGFVFTRGGYVEISKRLSLPLGSTLDRYDGLLFSVGGNGRSYVVILETGPLADTSQSKKYFARMTTKVGFCRVRVPFSAFRPVNPQDPPLDPFLVHTLTIRFEPKRQRPGDGSQSATDPRNFELILEYIKALPTGQETDFILVSCSGSGIEPNRREQVLKAKKAGEDALRRSGLGYTIVRPGPLQEEPGGQRALIFDQGNRISQGISCADVADICVKALHDSTARNKSFDVCYEYVAEQGNELYELVAHLPDKANNYLTPALSVLEKNT</aaseq>

Gene Sequence

<dnaseqindica>1..723#1295..1507#1619..1823#1943..2018#2127..2262#2374..2478#2583..2660#2957..3046#3134..3199#3436..3492#3581..3658#3738..3785#3897..3968#ATGGCCGCCGCCATCGTGGCCGCGCGGGCGCCTCCGGGCGGCGGCGGCGCCGCAGCCGTCATCGCGTACCACCACTGCGCGTCCCCCTCGCGGGCGCTCCCGCTGGCGGCCGGCCCGTCCGCGGGAGGAGGGGTGGTGGTGGGGAGGAGATACCACCACCACGGCGGCGCGTGCTGCTTCGCCGCAAAGCCCACGCAGGTGGCCGCCGAGGTGGATCAGGGAGGGGCGGCCGAGCCGGGTGTCGCTTCCGCCAATGCTGCGGTGGAGGCGAAGCCGCGTAAGAAGGCGCGATCCCGGCGAGGAAGGAAGGGGAAAAGGTCGTCGTCGTCGGAGACCAGGACGACGGCGGTGCTCGAGGAGGAGGAGGAGGTGGAGGTGAAGGAGAAGAAGACGGAGGAGGATGGAGAGGAGGGGAAGAGGAAGGAGAAGGCGGCGGGGCTTGACCTGGACGAGGTGATGGCGGTGAGCCCCGTGGGGCTAGGGCGGCGGTCGCGGCAGATATTCGACGAGGTGTGGCGCAAGTTCTCGCGGCTGGGGCAGATGTCGAGCGCGTCGTCGACGGCGCTGGCGGAGGAGGAGCAGGCCGTGCTCATCCGCGGCGGACCCATGTGCGAGTTCACCGTCCCCGGCGCGCAGGACACCACCGTCCTCGTCGTCGGCGCCACCAGCCGCATCGGCCGCATCGTCGTCCGCAAGCTCATGCTCCGCGGGTACAATGTCAAGGTCAGCTATATCTAATCTATACTCCCCTGCTAATTATACTAGTTCCAGTTCAAATAATATATCTGAACTGATCTGATCTTACTGACAAATGAACATTCCAAGGGACTGGTTGAGAGTGTGATTTAAGAATTTAACATGATCTGTGATGTTTCATATCATCAATGTCTCTGTCTAGAATCCAGATTGTTTCCTTCCATGTATGCAACTTCAAAACTGTTGCTATACTGAAAAGTGATAATTGATGGCTTTGAACTATAGTTCCTGATATCTTCATCTAGTTGGTTCTAGATATGTGTGTGCATTTAGTTGTCTGCTTCATCCCCATTTGCTGAATTCTCCAGGATTTAAGGTCTGTGTTGAATATGACAAAGTATGCAACGTGTAATATGCATACGAACTCGGTACTCCCTAACAATGAACATGGAGAAACAAAGAGTGATCAATAGCAAAATTGGAAAACATTTCGATGTTGGAAATGGACAGTGAACAGTAATGTTTCTGAAAATTTGCAAATTATTTACAGATGGTGGTTATCTGATCTGTTCGTACCATGGTTTTAACATTATAACAGGCTTTAGTTAGAAGGAATGATGCTGAAGTGATAGATATGCTCCCAAGGTCGGTGGATATTGTTGTCGGTGATGTTGGTGATCCTTCAACTGTCAAATCGGCTGTATCAGGTTGCAGCAAGATAATCTATTGCGCAACTGCACGCTCAACTATTACTGGAGACCTAAATAGGGTTGATAATCAAGGAGTAAGGAATGTTAGTAAGGCTTTCCAGGTATTCCTTATGACCTCAATTTATCATCTTACCGGTAGTAATGTTATTGATTTTGAGAGTATTCTTGCCTCATTGAAAATTTCTTTAACTCAGCTCTGCATTACGCTGCAGGATTACTACAATGAATTGGCTCAGCTTAGGGCTGGTAAAAGCAGCAAGAGCAAACTCCTGATAGCAAAATTTAAATCTCCCAAGTCTCTGAATGGTTGGGAGGTGGACCAGGGATCTTATTTTCCAAACACATTTGCTTCTAGGTTTGATGAAGGTATCGATGCATCATTTGACTTTTCAGAGGCTGGTCAAGCTGTTTTCTCAGGTATCACCTTCTGCTATGTAGATTTAGGACTTTCTTCTCTGCAAATGCACTAAGTTTGAGTTGCCTACACGTGCTGATTTCATTTCCATGTCAATTCTTACGAAACAACCTTTAATCAGGATTTGTTTTCACAAGAGGTGGATATGTTGAGATATCAAAAAGGCTATCTCTTCCTTTGGGATCTACTCTAGACAGGTATGATAAGATTTGTATATTTTACTAAGAAGATTCTTTGATTTTATTTTCGTATATTATACATCAGACTGAAAACTTTGGCATGTTATTCTTTCACTGTATACAAAGGTATGATGGCTTACTTTTTTCGGTGGGAGGAAATGGAAGATCATATGTTGTTATTCTTGAGACTGGTCCGCTGGCTGACACCTCCCAGAGCAAGAAGTACTTTGCTCGGATGACTACAAAAGTAGGATTTTGTAGGGTAAGTTGTGTTCAATAACCAAGCTGTATGATCAGATGCTTGTGCTTCCATCTAAGAAATCAAAGAATTCAGGAATTGACCATTTCTTTTGCCTTCTCTGTTTTTCTGCAGGTGAGGGTACCATTTTCAGCTTTTCGGCCAGTAAACCCTCAAGATCCTCCCCTAGACCCTTTTCTTGTGCATACACTAACAATTAGGTTTGAACCCAAAAGACAGGTTAGTACAATACAATGAATTTATTTGAAATGTTACCTTAAGGTAATAAATGTAGAGATGATTAAACATGAAATTGGTGGCTCAGCTTTTAATGTATTCTGCAGAGACCTGGTGATGGATCTCAAAGTGCTACTGACCCCAGAAATTTTGAGCTTATATTGGAATACATCAAAGCTTTGCCTGTAAGTTGTTCCTAGTTTGATTGTCTGTGGCATGCTTCGCTACTTTCATTTCCTTCCCTGTTTAATTCTTGTTGTGTCCAACTCTTCTTTTAATTTAAATACCTTCAACATTCCCACTGATTATTTTGGTAGGAAACATGACCTCTTTTTTTTTGTCAGAATTGAAAAGGCAATTCAATTAGGTTATAAAAGCATCTCTTTATTTCTTTTGCAGACTGGTCAAGAATTTTTGTCAGAATTGAGAAGGCAATTCAATTAGGTTATGTTTAAAAAGCATCTCTTTATTTCTTTTGCAGACTGGTCAAGAAACAGACTTCATTCTGGTCTCATGCTCAGGTTCTGGGATTGAACCTAACAGAAGAGAACAAGTCCTCAAAGCAAAAAAGGTTTTAATTTTAATAACCATTTAAAATGCTTACACTTCTCTAATTCAAATGTTCATCAAATTATTAAGGACCTTTGAACATTTCTAGGCTGGAGAGGATGCATTGAGAAGGTCAGGCCTTGGATACACAATAGTACGCCCTGGTCCACTGCAGGTATGGTGTATTGATAGACCTCCTGACAGAAATGCTTCACTTTGAGCTCATAAGTTTACATTCTGCTTTCAGATTATTTATTAAGCTAATAGCACTCCACTTCCATTCTATGTTCAATAATCATTAGAACATAATGTGTTAGTAGAAGATATTAATTAGAGATCAGTATTTGCAGACTGCTGTATACATATCATTAAAACCAGTTTCATCATGATCACTCAACCTTTTTTTTCCAGGAAGAACCTGGTGGTCAGCGTGCATTGATCTTTGATCAAGGGAACAGAATCTCGCAGGTGAACCTTCATAAACTATAGGAGTCTGCTTTTCCCATAATATGTTGATAGCATCATACATAAATAACTGATCTTTCTTGTAATATAGGGTATCAGTTGCGCCGATGTAGCAGATATTTGTGTCAAAGCATTGCATGATTCCACTGCTAGGAACAAAAGTTTTGATGTAAGCAACTTTCTTCCACTTTCTTCTGTATAGGATGATCAGTGTTGCAATACTAACTTGTTATTGCCTACTCACTTAGGTATGCTACGAGTATGTAGCTGAGCAAGGGAATGAGCTATATGAACTTGTGAGTATTTCTGAATCCACAACTGATGGAACTCTTAAATCTTAATCTCCTTTCTCCAATTGAGAGTTGCACTCCCAATTCTAATTTATTTTGTACTGAATGTTTCTGCAGGTGGCCCATTTACCAGATAAAGCTAACAACTATCTTACACCGGCATTATCTGTTCTAGAGAAGAACACCTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA020573