BGIOSGA020574

From RiceWiki
Revision as of 12:48, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA020574| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA020574, complete gene.| tag = OsI_243...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA020574

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA020574, complete gene.

LocusTag

OsI_24384

Ensembl Transcript ID

BGIOSGA020574-TA

Ensembl Protein ID

BGIOSGA020574-PA

Length

3627

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:31612111..31615737

Sequence Coding Region

31615447..31615737,31615241..31615352,31615082..31615155,31614826..31614894,31614662..31614745
,31614491..31614560,31613768..31613823,31613543..31613664,31613368..31613439
,31613195..31613276,31613029..31613106,31612111..31612281

Genome Context

<gbrowseImage1> name=IndicaChromosome06:31612111..31615737 source=RiceIndica06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome06:31612111..31615737 source=RiceIndica06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGTCCACCGTCTCCTTCTCCCCGGCCAACGTGCAGATGCTCCAGGGCAGGAGCTGCCACGGCCACGCGGCGTTCGGGGGCTGCTCCGCCGTGCCAAGAACCGGGCCAAGGATGCGTTCCGTGGCCGTGAGGGTCAGCAGCGAGCAGGAGGCGGCGCCGGCGGTCAGGGCGCCGTCGGGGAGGACCATCGAGGAGTGCGAGGCCGACGCCGTGGCCGGGAGATTCCCGGCTCCCCCGCCGTTGGTCAGACCCAAGGCTCCCGAAGGAACACCTCAGATCAGGCCTCTTGACATGACAAAGCGCCCTCGTCGCAACCGCAGGTCGCCTGCTCTTAGGGCCGCATTCCAGGAGACCACCATCTCACCTGCCAATTTGGTGCTCCCGCTGTTCATCCATGAAGGGGAAGATGATGCTCCTATTGGAGCTATGCCTGGGTGCTATAGGCTTGGTTGGAGGCATGGGCTTCTTGATGAGGTCTACAAGTCTCGTGATGTTGGTGTTAACAGTTTTGTGCTGTTTCCAAAAGTTCCTGATGCATTGAAGTCTCAATCTGGAGATGAGGCATACAATGATAATGGTTTGGTTCCACGGACTATTCGCCTGCTCAAGGATAAATTCCCTGACATTGTTGTCTACACGGATGTTGCTCTGGACCCTTATTCATCTGATGGTCATGATGGCATTGTCAGGGAAGATGGAGTAATTATGAATGATGAAACAGTTTATCAACTGTGCAAGCAGGCTGTTTCACAGGCACGTGCTGGTGCTGATGTAGTTAGCCCTAGTGACATGATGGATGGCCGTGTTGGAGCAATACGTGCTGCTTTGGATGCTGAGGGTTTCCATGATGTCTCCATTATGTCCTATACTGCAAAGTACGCCAGTTCGTTTTATGGCCCATTCCGAGAAGCTTTGGATTCAAATCCAAGATTTGGGGACAAGAAGACTTACCAGATGAACCCAGCTAACTACAGAGAAGCGCTTCTAGAAACTGCTGCAGATGAGGCAGAAGGAGCTGATATTCTTCTGGTAAAACCTGGATTGCCATACTTGGATGTCATCCGTCTTCTTAGGGACAATTCAGCATTGCCAATCGCTGCATATCAGGTCTCTGGAGAGTACTCCATGATCAAAGCTGGAGGAGCACTGAACATGATCGACGAAGAGAAGGTGATGATGGAGTCGCTCATGTGCCTGAGGCGAGCCGGCGCTGACATCATCCTGACGTATTTCGCGCGTCAGGCCGCCAACGTGCTGTGCGGCATGCGATCCAACTAG</cdnaseq>

Protein Sequence

<aaseq>MASTVSFSPANVQMLQGRSCHGHAAFGGCSAVPRTGPRMRSVAVRVSSEQEAAPAVRAPSGRTIEECEADAVAGRFPAPPPLVRPKAPEGTPQIRPLDMTKRPRRNRRSPALRAAFQETTISPANLVLPLFIHEGEDDAPIGAMPGCYRLGWRHGLLDEVYKSRDVGVNSFVLFPKVPDALKSQSGDEAYNDNGLVPRTIRLLKDKFPDIVVYTDVALDPYSSDGHDGIVREDGVIMNDETVYQLCKQAVSQARAGADVVSPSDMMDGRVGAIRAALDAEGFHDVSIMSYTAKYASSFYGPFREALDSNPRFGDKKTYQMNPANYREALLETAADEAEGADILLVKPGLPYLDVIRLLRDNSALPIAAYQVSGEYSMIKAGGALNMIDEEKVMMESLMCLRRAGADIILTYFARQAANVLCGMRSN</aaseq>

Gene Sequence

<dnaseqindica>1..291#386..497#583..656#844..912#993..1076#1178..1247#1915..1970#2074..2195#2299..2370#2462..2543#2632..2709#3457..3627#ATGGCGTCCACCGTCTCCTTCTCCCCGGCCAACGTGCAGATGCTCCAGGGCAGGAGCTGCCACGGCCACGCGGCGTTCGGGGGCTGCTCCGCCGTGCCAAGAACCGGGCCAAGGATGCGTTCCGTGGCCGTGAGGGTCAGCAGCGAGCAGGAGGCGGCGCCGGCGGTCAGGGCGCCGTCGGGGAGGACCATCGAGGAGTGCGAGGCCGACGCCGTGGCCGGGAGATTCCCGGCTCCCCCGCCGTTGGTCAGACCCAAGGCTCCCGAAGGAACACCTCAGATCAGGCCTCTTGTAAGCCCCCCAATGGATGGATTTGCAATGTCGTTTGTGGTTTGTGGTATGATTTCAGAGGACTGAATTTTGGACCTGTTTGATGTGTGTTCAGGACATGACAAAGCGCCCTCGTCGCAACCGCAGGTCGCCTGCTCTTAGGGCCGCATTCCAGGAGACCACCATCTCACCTGCCAATTTGGTGCTCCCGCTGTTCATCCATGAAGGTGTGTGATTAAATCCACTGACATGAATGGTGAACACACACAATTAGATTTTGATAGATTGAGCTCGTTTTGTGATGATCTGCAGGGGAAGATGATGCTCCTATTGGAGCTATGCCTGGGTGCTATAGGCTTGGTTGGAGGCATGGGCTTCTTGATGAGGTATTCAGAGTACTGGGAATTATCTAAAAAAAAAATGTTTATCACTTGTCATGCATTTAGATTTTTAGTGATTCTGTTGAAGATAATCCATGTGCATTTTCATATTGCTTGGATCAATAGTGTTAAGCTCTTAAGTAGCTACCAGTCTTCAGGCTTGATGTAATGTGTTCCATATGATAACTTGCAGGTCTACAAGTCTCGTGATGTTGGTGTTAACAGTTTTGTGCTGTTTCCAAAAGTTCCTGATGCATTGAAGGTATTTCAACGAATATAATTCATTTTCTGTTTCATGTGTATTAATATCTTGAGTTGACTTAATACTCTTTGTTCCTTCAGTCTCAATCTGGAGATGAGGCATACAATGATAATGGTTTGGTTCCACGGACTATTCGCCTGCTCAAGGATAAATTCCCTGACATTGTAAGTAACATGTCCCTCATTGAATTTGAATGTATAAGTCTATATTGTGGCCTTTACTTTAATTGCTATCATCTTTGCTGCTAATAATATGTCTGATTTAGGTTGTCTACACGGATGTTGCTCTGGACCCTTATTCATCTGATGGTCATGATGGCATTGTCAGGGAAGATGGTAAGGAAAATGGTCACCTTTTGACCTTGCACTGCTTTTAGAGCGAGAAACATATGGCATGTTTTTATCCACTGCTTGTGTTTTGATGATAGCATGGGGAATATGTTGGTTACTCTGAAAAACGCTGATATTCAAGAATAATCAAGATATCTCCATGCATATAAATATATAATAATGACGGTTTCTACAACTGGTATTAAACTGGATATAACCAGCTAGTCTAGGTTTTGTGTAATTAACTGGTCGGTTTTGGCCACTCCACAATGAAACTAGGTGTTCCTCCTTTTTCCTACAAAATGTTGCAAACGATGCATCTCCATACCCAGTTACCCACACTAACCTTTTCTTTCAAGGCCCTATATACCTGAAGATCAGTTGCCAGCTGTAATTGGCTAGTTGATTCACAATTTCTCCTCTTCAGTAATCACTGTCATAATTATAATTTCTGAGAAGTGAGAACTACCACTGATGGCGTCAATGTGGTTTTCGGATTATGTTGGGTGGTGATGCTAGAGTCTATAATTTTATTTTTTATAATGTATTATAGCTCAAATTAGCAATTTTCATTTCTATTTTCTGATCCAAGTACTTAGCTGAGTCGTATGATTTACCATACATTTTTTTGTGGTCCCACCCTGATTGTCAATTTGTTTGCATCTCGTACCAGGAGTAATTATGAATGATGAAACAGTTTATCAACTGTGCAAGCAGGCTGTTTCACAGGTCTGTCTCTTCTCTAGTTCTCTTTATATTCTGTTTTTTATCTTGATCAAGTACCTTCACAAGTGCAATAGTTGAGTAACATAGAAACTGTCTGTCTCAATAGGCACGTGCTGGTGCTGATGTAGTTAGCCCTAGTGACATGATGGATGGCCGTGTTGGAGCAATACGTGCTGCTTTGGATGCTGAGGGTTTCCATGATGTCTCCATTATGTCCTATACTGCAAAGTACATACCTATGTCACTGATTCCATCATATTATTTCTAGTATCCCATAGCACTGAACCTTCTTGTAAGTTAAATAATGCATATGTCAACTATGCTTATGCAGGTACGCCAGTTCGTTTTATGGCCCATTCCGAGAAGCTTTGGATTCAAATCCAAGATTTGGGGACAAGAAGACGTATGGAACTTGCACTGAATCTACTATTTCCATCTAGCATACTGTTTAGTTGCTTAATATCTAAATTCATCATTTTCATTTCATTCTGAAGTTACCAGATGAACCCAGCTAACTACAGAGAAGCGCTTCTAGAAACTGCTGCAGATGAGGCAGAAGGAGCTGATATTCTTCTGGTAATTGTCTCGATTTGCATAACAGTGCCGTATTACCAAGATAGCTTATTTACATGTTGGTTCTAAAAGTACGATCCCCGTTTGAAAGGTAAAACCTGGATTGCCATACTTGGATGTCATCCGTCTTCTTAGGGACAATTCAGCATTGCCAATCGCTGCATATCAGGTTCGTTTATTGGGCTAATCAGTTCTGCCTTTTCAGCCCCTTTTTCTTTATTGTTTCCAATCCCTGCCCTTTTCTTAACTGTTTCCAACTTCCCTGAAAAAAATTAGGTAGTCCTTGTCTACTGTCTAGATCCATTACCATTGATGAACTCATGTTAGCATTCGCACTAGCATGCCATAATTCAGTTCCAGACTTCCAGTTGCTCCACGCCTCACTAGTTCATCAGATAGTTCATGCGCCCACAAGAATCTTTCCTCTTATTCATATCAGAGTCCTTCATGTTTACTTTTTCTTCAGTTTGAGCCACTTCCAACTCCTGGTTCATGCATTGCTATGGTACCTCTTACAAATAAAATACTTGCATATCAATATTACAGGAGAAAGTTGAACCTTGATCTTTCATCCATCCTGTGCATTATGTGATGTCCATACTTGCATCTTATAGAGACCACCAAAACCTGCTCTAGATAGCATCATCGTTCCTTGGTTCTTAACAAGCTGACTAGATATCAACTGTTTGTATACTCAAAACACCAAATTGATTATATCTTTTTTTAAAAAAAATGATTTGTTGTTATCTTAAGAAAAGATTCTTGGTCATCAACGCCCTGTACAGTTTGATCTTTGATCTGAAATGTCATATAGGTCACACATATACCTCTGCTTGTTTTCTAATTAATCTCAAAAGTGTTGGGCTTTGATATGGGCCTCTCACAATCTCGGGCTTTGTTAAAATTAATCATCCAGGTCTCTGGAGAGTACTCCATGATCAAAGCTGGAGGAGCACTGAACATGATCGACGAAGAGAAGGTGATGATGGAGTCGCTCATGTGCCTGAGGCGAGCCGGCGCTGACATCATCCTGACGTATTTCGCGCGTCAGGCCGCCAACGTGCTGTGCGGCATGCGATCCAACTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA020574

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA020574&oldid=43099"