BGIOSGA020577

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Revision as of 12:48, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA020577| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA020577, complete gene.| tag = OsJ_225...")
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Gene Name

BGIOSGA020577

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA020577, complete gene.

LocusTag

OsJ_22552

Ensembl Transcript ID

BGIOSGA020577-TA

Ensembl Protein ID

BGIOSGA020577-PA

Length

3222

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:31553631..31556852

Sequence Coding Region

31556176..31556852,31555791..31555927,31555146..31555415,31553631..31553974

Genome Context

<gbrowseImage1> name=IndicaChromosome06:31553631..31556852 source=RiceIndica06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome06:31553631..31556852 source=RiceIndica06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCTTCTTTTGGGATGAACTGGAATCAGAAGAGCCCTGTGTTTTGGGACTGGGAAAATCCAGCGCCTTTCGGTCCGAATACAATGGAAAATCCCAAGAGCATACCTCACCCTGAACCAAGAGGTGTAGTTGTCGCGGCCGCAAATCATGGATCCACCAATTCATCCGGTGGCACGTTCACTTCTAGCTCGGAGCTAGCCAATGGTTCATCGAAGAGCTCCTTGTCAGCGTCGTTCGATTCCTCATCCAAGCTGGGGAACAGCTTAGAGTTCAGGTTTGCTTCTGTCAAAGGGCATGGCAAGAACATGTGCAAGGATGGCGAGGCCGGTAGAGTTGAAGACTCGGGCACTTCTCCAGCTGTGGCAGTTAGCCATGGTGAGCCGGTAATAGGACTCAAGTTAGGGAAGAGAACTTACTTTGAAAATGTTTGTGGAGGGCAGAATGTCAAGAGCTCCTCTGCAGCTTCAGGTGTGACTTGTCCATCTACTGTGGTCAAGAAGATGAAGGTGTCTCAGCAGAGCACACAAAGCTCATACTGCCAAGTTGAAGGCTGCAAAGTCGATCTGTCCTCCGCAAGAGAATACCATCGCAAGCACAAAGTTTGTGAAGCTCATTCTAAGGCACCAAAGGTTATTGTTTCTGGTCTGGAGCGCCGTTTTTGCCAACAGTGTAGTCGGTTTCATGGTTTAGCTGAATTTGACCAGAAAAAGAAAAGTTGCCGCAGGCGTCTATCTGATCATAATGCACGAAGAAGGAAACCGCAACAAGAGGCAATTTCATTTGGTTCATCAAGGCTCGCCACGATGTTTTATGATGCAAGGCAGCAGACAGATATTTACTTTGGCCAATCTCCTTTTGGCCAAGTGAGAAGCAATGCAATTTCTTCATGTGACAACCTGGGAGGCTTCAAATTTACAGAAGCAAAACTCCCCTGGATGAAGCCAATGAAAACTATAGGCCTTGAGGATCTGAATTTCTCTACCCTGCAGATGCCAGGCAATGTTGTGTCGCATACGGTGCATCATCATGATTTTGATGGGCTCATACCATTCAAGGGAAACACCACGAAGGTCCTCAACCAAGGTGTGGATCCAGCCTGTGCCGTCGTGTCCTCCAACTCGAATGGAGCCCCGGATCTTCGGCGTGCTCTCTCTCTTCTGTCAAGCGATTCCTGGGGCCCGGCCGACGTTCAGGCCGGCTCCCAGGTGCATCCCGGTGGAGTGATGCCGCCCCTCGCCGTTGCCGCCGCCACCGTCACCGCCCCGACGAACCCTGTCAGTGTGATGCATGCTCTGCACCCGTCCACCGGAGGAGGAGGATTCTGGCAAGACGGCGACGACCCGCCTCCGCTCGATCATGCCTCGCAGGCTCAGGCGTTCATGCATCCCGGCAATGGCAGCAGCTCCGGCTATGGCCATCTGCACTGA</cdnaseq>

Protein Sequence

<aaseq>MASFGMNWNQKSPVFWDWENPAPFGPNTMENPKSIPHPEPRGVVVAAANHGSTNSSGGTFTSSSELANGSSKSSLSASFDSSSKLGNSLEFRFASVKGHGKNMCKDGEAGRVEDSGTSPAVAVSHGEPVIGLKLGKRTYFENVCGGQNVKSSSAASGVTCPSTVVKKMKVSQQSTQSSYCQVEGCKVDLSSAREYHRKHKVCEAHSKAPKVIVSGLERRFCQQCSRFHGLAEFDQKKKSCRRRLSDHNARRRKPQQEAISFGSSRLATMFYDARQQTDIYFGQSPFGQVRSNAISSCDNLGGFKFTEAKLPWMKPMKTIGLEDLNFSTLQMPGNVVSHTVHHHDFDGLIPFKGNTTKVLNQGVDPACAVVSSNSNGAPDLRRALSLLSSDSWGPADVQAGSQVHPGGVMPPLAVAAATVTAPTNPVSVMHALHPSTGGGGFWQDGDDPPPLDHASQAQAFMHPGNGSSSGYGHLH</aaseq>

Gene Sequence

<dnaseqindica>1..677#926..1062#1438..1707#2879..3222#ATGGCTTCTTTTGGGATGAACTGGAATCAGAAGAGCCCTGTGTTTTGGGACTGGGAAAATCCAGCGCCTTTCGGTCCGAATACAATGGAAAATCCCAAGAGCATACCTCACCCTGAACCAAGAGGTGTAGTTGTCGCGGCCGCAAATCATGGATCCACCAATTCATCCGGTGGCACGTTCACTTCTAGCTCGGAGCTAGCCAATGGTTCATCGAAGAGCTCCTTGTCAGCGTCGTTCGATTCCTCATCCAAGCTGGGGAACAGCTTAGAGTTCAGGTTTGCTTCTGTCAAAGGGCATGGCAAGAACATGTGCAAGGATGGCGAGGCCGGTAGAGTTGAAGACTCGGGCACTTCTCCAGCTGTGGCAGTTAGCCATGGTGAGCCGGTAATAGGACTCAAGTTAGGGAAGAGAACTTACTTTGAAAATGTTTGTGGAGGGCAGAATGTCAAGAGCTCCTCTGCAGCTTCAGGTGTGACTTGTCCATCTACTGTGGTCAAGAAGATGAAGGTGTCTCAGCAGAGCACACAAAGCTCATACTGCCAAGTTGAAGGCTGCAAAGTCGATCTGTCCTCCGCAAGAGAATACCATCGCAAGCACAAAGTTTGTGAAGCTCATTCTAAGGCACCAAAGGTTATTGTTTCTGGTCTGGAGCGCCGTTTTTGCCAACAGTGTAGTCGGTGAGAGCATAATCTTATTTCACTTTGCATGCTTTCAAGACTTCCTTTTTTATATGCACTACCCTCTTTAAATCAATAGACACAACAACAATGAAGAAAATTGTCTCTATCTGTATTGCATAAAGCATATACCAGTATAAATAAAGTCAAAGAAGTAGCACTAGTTTGTTTGGATTAAAGTACAACGCATGGTTCGAGGTTATTGATCTTTACTAGTTTGCTGTCTTATGTACTCTATTGTTTTGTAGGTTTCATGGTTTAGCTGAATTTGACCAGAAAAAGAAAAGTTGCCGCAGGCGTCTATCTGATCATAATGCACGAAGAAGGAAACCGCAACAAGAGGCAATTTCATTTGGTTCATCAAGGCTCGCCACGATGTTTTATGGTAGTACTGACCCCTTAGATGCATCACAATGCTAGATGCCTTGTTCTGTTTTGATGACTGAAAGCTATTCCTTTAACCCAATCAATACTGCTGAAATAGTAGGATGATACCGTAAGCATTTTAACATGTAACATATCCAGTTTTCTGCATACGCACGACTGGTGGGTGTTACCTGGTGGCACACTTCTTTTTAGAAGGGAGCTTAACCCATCCTCTTGAGTCTTGACAGTTACTATTATATTGTTATATAATAATGCATAGTAATCATATATGGTAGCTTGTGTATTTTCATGATGTAGTTTTCCACTTGACGCGTTTTTACCAAGTCCTACACAAATCTTTCATGGTGACAGTGTTTGCGATTTTGCATTGCAGATGCAAGGCAGCAGACAGATATTTACTTTGGCCAATCTCCTTTTGGCCAAGTGAGAAGCAATGCAATTTCTTCATGTGACAACCTGGGAGGCTTCAAATTTACAGAAGCAAAACTCCCCTGGATGAAGCCAATGAAAACTATAGGCCTTGAGGATCTGAATTTCTCTACCCTGCAGATGCCAGGCAATGTTGTGTCGCATACGGTGCATCATCATGATTTTGATGGGCTCATACCATTCAAGGGAAACACCACGAAGGTCCTCAACCAAGGTACATTAACATCTCTCAATTCATCACTGAACTTTAAAGAAAAGACATGCAGCTGTTGCAGCATCTTCAATTTTAAGTTTTTAACCATGTGTTTTTATTTAATGATCTAAATGGGACTACCTATTTTAGCAATTCAATTTCTTATCAGTAAATAGGTCCGACTGATTTGACCTTTTGTTTGATTGTTATCTGTACTGTTCACCTCTCTGCTATTCGACAACGCCGAGACAGCATTTTATTCTCCATAATTCCTTTTCATACGGCTACAATCTTCTGAAAAGTCTTTGTTGCTAAACAGTCAGCATTCCCGACTTGGAGTTTGGACTAAACAAGCTACTTAGTCATAAGAACACATCATTTTGCTCCCTTTTTTTCAGTAACTACTGATTACTCATTTTATCCATTTGCATCAGCTTGCTTTATGGACAAGCTAGAACCACAAATTGTTTCTCAAAAAAAAAAAAACAGAGAGGCTAGATCCACCAATTATCTGTTACAAGCTTTTTGGACTTCCTGCCTTGGTATGTTGATCTTTCAATCTGAACTGCTCCATTTTTTCTCTGGGTGGAGCCTGGGAGCCTTTCACCATCCCAAAAAGCAAGAAATGTGTTTCACGCGAGAGATCGACAAGAAATGACTAGGTCCCATTTACTAGGTTTATGGCCCCATCACTGCCCCTGATAATGACATTCACCAGAACTTTTGGCTGGTAGTCCAATACCCATCTGTGCCTGGTACTAACCTGGGACCAACAAATACTTATTGGATATGCCAGCTTAGTGTTGCAACTTGCAAGGAGTGTGAGTCATCTCAATAGATACAGGCCTTCAATTCAGACCCCCCAAAAAAGTATTCCTTTTCTTTCTGTTGAGCTGTCTAAATCATCTCCAGTTGCAGGATCATAGAATACACCAGGCACAAGCAACTAAAGATGATCTACGATTTTTAGACAATAGATCTTCATTGACCCGGCTTTTGCGAGAAAGACAGAAACAAACACGAGTACAGAGTTCAGAACAGAACTGAAGATGATAAATTCAGAGCCCCCCCAAAAAGTGTCCCTTTTAATCTGTTGGGCGGTCTAATTCTAAATTATTCTCTCCAAATTGCAGGATCATATATATGAATACCTGATATTCTGATGATGCATATGATTTGTGATGATTTTCAGGTGTGGATCCAGCCTGTGCCGTCGTGTCCTCCAACTCGAATGGAGCCCCGGATCTTCGGCGTGCTCTCTCTCTTCTGTCAAGCGATTCCTGGGGCCCGGCCGACGTTCAGGCCGGCTCCCAGGTGCATCCCGGTGGAGTGATGCCGCCCCTCGCCGTTGCCGCCGCCACCGTCACCGCCCCGACGAACCCTGTCAGTGTGATGCATGCTCTGCACCCGTCCACCGGAGGAGGAGGATTCTGGCAAGACGGCGACGACCCGCCTCCGCTCGATCATGCCTCGCAGGCTCAGGCGTTCATGCATCCCGGCAATGGCAGCAGCTCCGGCTATGGCCATCTGCACTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA020577