BGIOSGA020584

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Revision as of 12:48, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA020584| Description = HKT1HKT1 protein| Definition = Oryza sativa Indica Group BGIOSGA020584, complete gene.| tag = | tid = BGIOSGA020584-...")
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Gene Name

BGIOSGA020584

Description

HKT1HKT1 protein

Definition

Oryza sativa Indica Group BGIOSGA020584, complete gene.

LocusTag

'

Ensembl Transcript ID

BGIOSGA020584-TA

Ensembl Protein ID

BGIOSGA020584-PA

Length

2263

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:31392058..31394320

Sequence Coding Region

31393332..31394320,31393060..31393218,31392058..31392178

Genome Context

<gbrowseImage1> name=IndicaChromosome06:31392058..31394320 source=RiceIndica06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome06:31392058..31394320 source=RiceIndica06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGTTCCTGAAGCCAAGCAACCCAGAATTCAGACCAGGTTACATTGACATGCTGTTCTTGTCAACCTCTGCTCTGACACTTTCCAGCCTCATCACCATCGAAATGGAGGTTCTCTCAAGCTCACAAATTGTGGTTATTACACTGCTGATGCTTCTCGGGGGTGAAGTCTTTGTTTCTTTCCTAGGCCTCATGCTTAGACTGAACCATAAGCACAACCCAGAGTTTTCAGGGGACAAGGTCAGTTCAGTTCCTATCGAGCTTGATACGATCAACTCGGCAAGCACTGTGATAAGTTGTGAAGAGCTGCAGCTGGAAGCAGCAATTCCTGAAGTTCCATCTTCCACCATTAAGGATTTGAAGAGGAGCAAGCGCCTGAGGTGGTTCTTAGGATTTGTAGTCTTCAGCTATTTTGTTGTGATCCATGTCGCTGGCTTTCTGCTGGTTCTCTGGTACATAAGTCGTGTCTCATCTGCAAAAGCTCCACTGAAGAAGAAAGGGATCAACATTGCACTCTTCTCATTCTCGGTCACGGTCTCCTCGTTTGCGAATGTGGGGCTCGTGCCGACAAATGAGAACATGGCAATCTTCTCCAAGAACCCGGGCCTCCTCCTCCTGTTCATCGGCCAGATTCTTGCAGGCAATACACTTTACCCTCTCTTCCTAAGGCTATTGATATGGTTCCTGGGGAAGGTGACCAAGTTGAGAGAACTGAAGCTCATGATCAAGAACCCTGAGGAGCTACAGTATGATTATTTGCTTCCTAAGTTGCCAACGGCGTTTCTGGCATCAACTGTCATTGGCCTTATGGCTTCCTTGGTCACACTGTTCGGTGCTGTCGACTGGAATTCTTCAGTCTTTGATGGACTCAGCTCTTACCAGAAGATTATCAATGCATTGTTCATGGCAGTGAACGCAAGGCACTCGGGGGAGAACTCCATCGACTGCTCACTCATCGCCCCTGCTGTTCTAGTACTGTTCATCATCTTAATGTACTTACCACCATCGACAACATTTGCACTGTCCAATGGAGAAGAAAAAACTGCAAATAAGAAAGCGAAAAGAAAATTAGGTTTAGTGGTGCAGAACTTGGCATTTTCACAGCTTGCCTGCATCTCAGTCTTTGTGATAGTTGCATTCATCACTGAGTACCCTTCACTGATTGATGATGATGATGATGATGGTGAAATGACAATGATCAGCTCTGATGTGGAGCTGATGAAGTTGGAGATAGATTGGCATGACTTTGACGAATTGAAGGATGTGCAATGA</cdnaseq>

Protein Sequence

<aaseq>MFLKPSNPEFRPGYIDMLFLSTSALTLSSLITIEMEVLSSSQIVVITLLMLLGGEVFVSFLGLMLRLNHKHNPEFSGDKVSSVPIELDTINSASTVISCEELQLEAAIPEVPSSTIKDLKRSKRLRWFLGFVVFSYFVVIHVAGFLLVLWYISRVSSAKAPLKKKGINIALFSFSVTVSSFANVGLVPTNENMAIFSKNPGLLLLFIGQILAGNTLYPLFLRLLIWFLGKVTKLRELKLMIKNPEELQYDYLLPKLPTAFLASTVIGLMASLVTLFGAVDWNSSVFDGLSSYQKIINALFMAVNARHSGENSIDCSLIAPAVLVLFIILMYLPPSTTFALSNGEEKTANKKAKRKLGLVVQNLAFSQLACISVFVIVAFITEYPSLIDDDDDDGEMTMISSDVELMKLEIDWHDFDELKDVQ</aaseq>

Gene Sequence

<dnaseqindica>1..989#1103..1261#2143..2263#ATGTTCCTGAAGCCAAGCAACCCAGAATTCAGACCAGGTTACATTGACATGCTGTTCTTGTCAACCTCTGCTCTGACACTTTCCAGCCTCATCACCATCGAAATGGAGGTTCTCTCAAGCTCACAAATTGTGGTTATTACACTGCTGATGCTTCTCGGGGGTGAAGTCTTTGTTTCTTTCCTAGGCCTCATGCTTAGACTGAACCATAAGCACAACCCAGAGTTTTCAGGGGACAAGGTCAGTTCAGTTCCTATCGAGCTTGATACGATCAACTCGGCAAGCACTGTGATAAGTTGTGAAGAGCTGCAGCTGGAAGCAGCAATTCCTGAAGTTCCATCTTCCACCATTAAGGATTTGAAGAGGAGCAAGCGCCTGAGGTGGTTCTTAGGATTTGTAGTCTTCAGCTATTTTGTTGTGATCCATGTCGCTGGCTTTCTGCTGGTTCTCTGGTACATAAGTCGTGTCTCATCTGCAAAAGCTCCACTGAAGAAGAAAGGGATCAACATTGCACTCTTCTCATTCTCGGTCACGGTCTCCTCGTTTGCGAATGTGGGGCTCGTGCCGACAAATGAGAACATGGCAATCTTCTCCAAGAACCCGGGCCTCCTCCTCCTGTTCATCGGCCAGATTCTTGCAGGCAATACACTTTACCCTCTCTTCCTAAGGCTATTGATATGGTTCCTGGGGAAGGTGACCAAGTTGAGAGAACTGAAGCTCATGATCAAGAACCCTGAGGAGCTACAGTATGATTATTTGCTTCCTAAGTTGCCAACGGCGTTTCTGGCATCAACTGTCATTGGCCTTATGGCTTCCTTGGTCACACTGTTCGGTGCTGTCGACTGGAATTCTTCAGTCTTTGATGGACTCAGCTCTTACCAGAAGATTATCAATGCATTGTTCATGGCAGTGAACGCAAGGCACTCGGGGGAGAACTCCATCGACTGCTCACTCATCGCCCCTGCTGTTCTAGTACTGTTCATCATCTTAATGTTAGTTCATGACACCTCATCTATTTATGTTTCATGTCATCCAACTAATACTGTTAGCTTCAGCCTTCAGGTGATGACATATTTGTCTGAAACTTTACTTTCTTGGTTTTCAGGTACTTACCACCATCGACAACATTTGCACTGTCCAATGGAGAAGAAAAAACTGCAAATAAGAAAGCGAAAAGAAAATTAGGTTTAGTGGTGCAGAACTTGGCATTTTCACAGCTTGCCTGCATCTCAGTCTTTGTGATAGTTGCATTCATCACTGAGTAGTGAGTACGTGCTCACGACAATGGAGTCCACATCCAGACTATCTCTAAGCTACTGTAAGCGATTGATAGTGGTGACATGTCCTTCCAGGGTGTTGCTTCCNTCCTCATTCTCTTTAGTTAGTGCGAAGTCGCACAGATTCCGTGATCATTGAGGTCATGCTCGGAGTCACTCATTGAGACGACGATATAAGTAGGACAAGAGACCATATTGTGGCCTAAATCTAGTAGGTGCTAAATGACCGATGATTACGAGAGCACATTGGATACGCCAACTCAGGAATATATAAAACGTCTCGGTTCAGACTTTAGAGCGAGGCGCTAAGGTATGCTCGCGACATCCGACAGTGCTTGAACTCCCCTCCAGAACATATTGTTGTCAGCACATCACAGCGTACATATAGCCCCACGTAGCAGTATTGGTCTACGAACGTTGGGGGGTGAGTCTAACCTGGTTACACCATACTAAGGTATGGGGCCGAGCTAGAGCACCGAGGTAATACGATGTAACCTGGACTCAGATGGACAACTGACGTACAGATACCGCTTCACACGTCTATTAACCTTTAAGGACGCCCTATGCACATTCCATGGTGACTGGCGTAAGCATTGCTTTTGAAACTAGACAATGGGTTAATGAGGATGATGATCCATATATTTCATTTTGAAACTAAAATCAAAGCCATGCTTGAAAATATTGTTGAAGCGTGCAATTCTTGAAAAATGATGACGAAGAAGAAGAATTCATCCCCTCCTCAATGAAGTGGACCTCGGTTCTTCGGCTCTCGTTACCTTGAAGCCTTCACAAACTATTCTTCGGCTCTCTTCACTAAATCGGAGACGTTGATGACAATGGTAAAGGACCTTCACATATTGTTCTTCAGCCCTTCACTGATTGATGATGATGATGATGATGGTGAAATGACAATGATCAGCTCTGATGTGGAGCTGATGAAGTTGGAGATAGATTGGCATGACTTTGACGAATTGAAGGATGTGCAATGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA020584