BGIOSGA020585

From RiceWiki
Revision as of 12:48, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA020585| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA020585, complete gene.| tag = OsI_243...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA020585

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA020585, complete gene.

LocusTag

OsI_24358

Ensembl Transcript ID

BGIOSGA020585-TA

Ensembl Protein ID

BGIOSGA020585-PA

Length

6411

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:31379458..31385868

Sequence Coding Region

31385627..31385868,31384784..31385300,31384463..31384692,31384170..31384361,31379954..31380017
,31379458..31379616

Genome Context

<gbrowseImage1> name=IndicaChromosome06:31379458..31385868 source=RiceIndica06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome06:31379458..31385868 source=RiceIndica06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGAGGATCTTTCCAGCTCTCAGATAGCTATCCTGACTCTCTTGATGTTCTTAGGCAGTAAGATGTTCCTTTCCTTTCTTGGCCTTGTCCTTGAGTCAAGCAAGCAAAACAAGCATGATCCTGAAAACCGTAGAGTCAGTTCAGTTACTGTGTGCAAGCAATCACAGCTAGAAGAGGCGATTCCCCAAACTCCATCCATGAACTCCATTGATATCAAGAAGAGATGCCTCAAATACTTAGGTGCTAGAGATGTGCTAACAAGGAAAAGCATCAACAAAGCTCTCTTCTCGATATCGGTCACAGTCTCCTCATTCACAAATGGAGGGTTATTGCCGACAAATGAGAGTATGGCTGTATTCTCCTCAAACAATGGCCTCCTGTTGCTACTCATTGGCCAGATTCTTGCAGGCAGCACACTGTTCCCTGTGTTTCTGAGGTTGGTGATATGGGCATTGAGAGGACTAAGATTAGCAAAAGCTGAAGAGCCTGACTTCATGATGAACAACAGCAGCGCAGTAGGTTTCAGTCACCTGCTGCCTAACTTGCAGACAATATTTCTTGCAGCTGTGGAGGTTGCTTTTGTAGCCATGACAGTCATCCTCTTCTGCTGCTTGAACTGGGATTCTGTAGTGTTTGCAGGGCTCAGCTCCCTCCAGAAGATAACCAATGCATTGTTCATGGCAGTGAATGCAAGGCAGGCAGGAGAAAATTCCATTGATTGTTCCCTTGTTGCGCCAGCGGCTTTAGTACTATTCATGGTACACTCCATCCTTGACAAAGTTGTTCTCAGCATGTCAAGATCACAAACGAATCGGCCAGAAAGCGACGATAGAACAAGCAAGGGGAAACCATTCCTGAAGATGATGGCATTTTCACCCCTCGGCTTCAACACCACAGTGATAATGCTGGTCTGCATCACTGAAAGGAGATCACTCTCCACTGACCCTCTCAATTTCTCCACATTTAACATCATCTTTGAGGTGATAAGTGCCTACGGGAACATTGGGTTGTCCACTGGCTACAGCTGCTCGAGGCAGCTGCAGCACCAGGAGGGGATTGCCTGCCATGAGAAGGCGTACAACTTCTCGGGGTGGTGGAGTGAACCAGGGAAACTGATTCTTGTTCTTGCGATGCTCTGCGGGAGGCTCAACTCAAAGGATTCCACAAGCGCACGAACTAGGTGGATATGGTTCTTGGTTAGATCCCAGAAAATATCTGTGGGCTTTGACACAAAGCTCACCTTAGTGATCATTGGTGCCGTTGGTGGTGGTGCCGCGATTGGTGGAGGTGCTGCTGCTGGTGCCGCCTCCGGTGGAGCTGCTGCCGAGGCCCCCAAGGCCGAGGAGAAGGAAGAAGAGAAGGAGGAAAGCGAGGACGACCTCGGATTCTCCCTCTTCGATTAG</cdnaseq>

Protein Sequence

<aaseq>MEDLSSSQIAILTLLMFLGSKMFLSFLGLVLESSKQNKHDPENRRVSSVTVCKQSQLEEAIPQTPSMNSIDIKKRCLKYLGARDVLTRKSINKALFSISVTVSSFTNGGLLPTNESMAVFSSNNGLLLLLIGQILAGSTLFPVFLRLVIWALRGLRLAKAEEPDFMMNNSSAVGFSHLLPNLQTIFLAAVEVAFVAMTVILFCCLNWDSVVFAGLSSLQKITNALFMAVNARQAGENSIDCSLVAPAALVLFMVHSILDKVVLSMSRSQTNRPESDDRTSKGKPFLKMMAFSPLGFNTTVIMLVCITERRSLSTDPLNFSTFNIIFEVISAYGNIGLSTGYSCSRQLQHQEGIACHEKAYNFSGWWSEPGKLILVLAMLCGRLNSKDSTSARTRWIWFLVRSQKISVGFDTKLTLVIIGAVGGGAAIGGGAAAGAASGGAAAEAPKAEEKEEEKEESEDDLGFSLFD</aaseq>

Gene Sequence

<dnaseqindica>1..242#569..1085#1177..1406#1508..1699#5852..5915#6253..6411#ATGGAGGATCTTTCCAGCTCTCAGATAGCTATCCTGACTCTCTTGATGTTCTTAGGCAGTAAGATGTTCCTTTCCTTTCTTGGCCTTGTCCTTGAGTCAAGCAAGCAAAACAAGCATGATCCTGAAAACCGTAGAGTCAGTTCAGTTACTGTGTGCAAGCAATCACAGCTAGAAGAGGCGATTCCCCAAACTCCATCCATGAACTCCATTGATATCAAGAAGAGATGCCTCAAATACTTAGGGTGAGTTTGAGAAGAAGGGGATTGAGAAGATTGGGAAGATACGTAAAACGAGGTGAGCCATTAGCGCATGATTAATTACGTATTAACTATTTAAAATTTTAAAAATGAATTAATATGATTTTTTAAAGCAACTTTCCTATAGAATTTTTTTGCAAAAAACGTATCGTTTAGTAGTTTGGGAAGCGTGCGCGCGGAATACGATGTCCTTTCTCACCCTATGTCACCCGAACGAACGCTCCCTTAGTGTTTGTGGTGCTGGCATACATGATCATTATTCTTGTCACTGGTTCTCTATTGGTGTTCATGTACATAGCTCATGTTTCAAGTGCTAGAGATGTGCTAACAAGGAAAAGCATCAACAAAGCTCTCTTCTCGATATCGGTCACAGTCTCCTCATTCACAAATGGAGGGTTATTGCCGACAAATGAGAGTATGGCTGTATTCTCCTCAAACAATGGCCTCCTGTTGCTACTCATTGGCCAGATTCTTGCAGGCAGCACACTGTTCCCTGTGTTTCTGAGGTTGGTGATATGGGCATTGAGAGGACTAAGATTAGCAAAAGCTGAAGAGCCTGACTTCATGATGAACAACAGCAGCGCAGTAGGTTTCAGTCACCTGCTGCCTAACTTGCAGACAATATTTCTTGCAGCTGTGGAGGTTGCTTTTGTAGCCATGACAGTCATCCTCTTCTGCTGCTTGAACTGGGATTCTGTAGTGTTTGCAGGGCTCAGCTCCCTCCAGAAGATAACCAATGCATTGTTCATGGCAGTGAATGCAAGGCAGGCAGGAGAAAATTCCATTGATTGTTCCCTTGTTGCGCCAGCGGCTTTAGTACTATTCATGGTCATGATGTGAGTTCCTCTCTTTCAAGTTCTTCACAGTCTCAGGCAACAATCAGAAGAGATAAAATAACATGGTTGCTTACATTTCTTAGGTACACTCCATCCTTGACAAAGTTGTTCTCAGCATGTCAAGATCACAAACGAATCGGCCAGAAAGCGACGATAGAACAAGCAAGGGGAAACCATTCCTGAAGATGATGGCATTTTCACCCCTCGGCTTCAACACCACAGTGATAATGCTGGTCTGCATCACTGAAAGGAGATCACTCTCCACTGACCCTCTCAATTTCTCCACATTTAACATCATCTTTGAGGTGATAAGGTAACAAATAACACTTGCACACACACAATTCTTCTCATAATGTTCTTGCTCACCTCCATGACTATTTTGAGTTATTCATCACCCATTGCTTCTGCACACAGTGCCTACGGGAACATTGGGTTGTCCACTGGCTACAGCTGCTCGAGGCAGCTGCAGCACCAGGAGGGGATTGCCTGCCATGAGAAGGCGTACAACTTCTCGGGGTGGTGGAGTGAACCAGGGAAACTGATTCTTGTTCTTGCGATGCTCTGCGGGAGGCTCAACTCAAAGGATTCCACAAGCGCACGAACTAGGTGATGATGATCAGAAGCGATCAGTATGCGATCGATGTTCTGCAAGAATCAAGAATGCAGTGTACCATCCCATCAAAAAAAAAGAAAAGAAAAATGGATGCCCTCAACTATGATCTGCCCCTATGTTCAAATTTCAATGATCGGCAACGGCGCACTTACCACTGGCGGCGGCGGCGGCGGAGGGTGATGCCCTTCGCGGGAGTGCCGCACCGGAGCTCGCCGCCGGCGAACAGACGGCGCCGTTGCAATTCCTGCAATTTTTCACAAATGCAGACAGTGAGAAAAGCCCCTCCTTTTCTTAAAAATTTAATGGATTAAAAAAGAGCACATTTCTCCCCCTTTAACCTTTATTATATCAATTAGTAAATTACATTAATTTAACTGATCAATCACAGCCAGGATCATGTTGCATGCAAGTATCTAGACGATGAACGGGGGGGAACATGTTCTCAAATGAATTGATAGATGAGAACAAGTGAATGAACAACATATCTACCAATGCTTCTGAAGTTCTGAAACTTGCTACGAATGCATTCATGGTAAATGCTAGTCATCTTCTGCAAACCAAGTTGAGCTTCTTCTTGCCAACATCAGTCGCTTGTTGGCGTTTTTTACATGTGGGCAAGGCAGCTCTGGCTTTAAAGCATCTATTTTTGTATTAAGAAAACAATTGGTGTTCATCATGCTGGAATTATGCTGATGAACACCAAGAGATAAAATGATCTCAAATCTCTTGCAACATCCTGATACAATGGGCGTCATGCTCTTAAATATATAAAGAAAATTTGACACACGTGACTTGTAGAGTAGTGAAGCTTAGTGCATACGAAAATGAATTGTCCTATAATTGCTGCTGCATGATTACATATGAACTTTGACAGAAATCATAATGTCATGGTGATGGTCACATGGTATATATTGCTTCAGCCAAGATGTCTGTTTATTCGTCCAGAAACCAGTGTCGCATCAAAATGAAAAAAAAAACAAGCAATCTGTGATTGTATATATCTATCTGCATATGTTTGAAAAGATCCCAGAAATCTCATAAACCATTCCCCTCAAGGAACTAGTACTGAATATAAGGAGTATACTATAATAAAGATGAATCATAATCAGCTATAATATCACTATTTACAGCAAGAAATAAAATAATAAAGAAATAGAACCTAACAAACTCTGATAAGATCATTGTGGTATCCTAAAAATAACAACCAATCCCTAAAAAACAACAACCAAAGTATCCACAGACTGCAAGCAAAAGGGAAGAAGCTAACTTTGTGAAAGCAAACCCCCACTGTACTAAAACGATATGAACACCACAACTCATGCAAAACTACAAGCATGGAAAGCATCAAAGGGCATCGGTACACATCCTGAAACTCATTTTAAGCCATCACTACAGTATATTATAAATAACCATCAAGTCCACATAAAATTATAATAAAAAAATAAGATATCGGAATACACATCACCTATACTATCAATATCACTCTAGCTTGCATTAACCCATAAAGCAGTTCTGGTTCATGCCTCTCAATGTCACTCTAGCTTGTATTCACCTTTAAAATGTCACTCCAGCTTATATTCGCCCTTGAAGCAGTCCGGTTCATGCATTGGGCGAACTTAGCATCTCGGGTAGGATCGAAATAGATATAATCGTCCCCACACATGCCTACTCTATTGCCTGCGCACTTCCCACAACTAATGATTCTTGCATTGGTCAGCTTATGAGTGCCATGCGCCATTTCTATGAAGTCCATGTCGCCACCACAATAATTTTCAATCGGATGCGCAGGATGCATAATCCTGGTCCCTTCATATTCACAATAACAACAACGAGCTTCTCCAAAAAAGACAATACCAAAAAAAGGTTAGCATCAAAATACAAGAAAGAATCATTCTATAAATTATATTTAAGAAAAGGACACAATCATATATCAAACATACCGTGTTTTGATTTTCTTGAGACGGTACAGCAAAAGGATACATCATCATCATCATTACTGAATTCAGCAAAGAATAACTTAAGTCCACTTCCAACTTTTGGTCTTGCCAAAAAGTTTACATGTGAATATGGACATTTGAAGTCCAAGAAGTTCATCTGGCTGCCCACACGCTCATTTGCAACACAGATTACTTGAAGATCATATAGATATCCCTTGTCACACCCTAAAAATTGCCTAAATTTAAAATACATTGTTTAAGTCATTTTTTAGAAAATATTTTAAAAGCCTACAAGCTAAACCCTAATTTTCTAGGAAAATTTTCAACATAAAAATGAGCTAGATAAAATTTTATTAAATACTATGCTTGCTCTTCTATTTTCTAGATTTTTCTGGGAATTATTTGAGCAAGGGAAGTATTTTTAATAATTGAAACAACAGTTCACAAATTATTTTATTTAAAAAGTTCAAAAAGCCCTCCCTAAAGTCGTTGGGCCGAATTCGGCCCAACACTCTCTTTTTCCCGCGCGGCCGAACCGGCCCACGCCGGCCCAAACCACCCAGCCGCCGCCCCTCCTCCCCTCAGCCGCCGACAGGTGGGACCCACCTGTCGGGTGTGTCTTCCACCTCCGGCCAGCCGAGCCCGAGCTGAGCCGCCGCGCCACGCCCCCTTCTCTCAAATCCGCTCCAATCCGACCCCGGTTTCTTCCGGATTTTTGAGGGGATTTTATCCTCTCGTTCTCCTCTATCTTTCCCCCCAAGAATCGGAGCAAATCGTTGGGTATTTTATCCGAATCAAACTCGTTTTCGAGTTTATCTCTAAAACCGAGTTTTTGATTTTCCCGAAGCGATTTCTTGCGGGAGGAGTCCGATCTCTTCAATCCAAGGCTATAAATAGGACCACCTCGTCGCCCTCTTTCGTTTGCCCCCTCTCCCGTGGTCTCTTGTGTCTTGTAGCGCCGCCACCACACCACCCAACCCGCCGCCGCCGCCGGCCATCCTTCGGCCGCGCCGCGCCGCCGCGTCCGCCGTCGCCGCCGCTTGCCGTCGCCGTCGTTAGGTGCGCACGGAGGTGAGAAAGCCCGACCGCCCCTTCCCCTTCGTCGCCGGTCGCCGTAGCTCGTCGTCGTCGGTCAACTCAAGCCGCCGCCGTCGCCTCCTCGTCGCCGGTCGTCGTCGGTCGTTGTTTGACGCATAGGTGAGCACCGTTGGGTTCGCGTCGTCGCCCTCTACGTGTAGGTGTCCTCCAAAACCCCGGCCGACCATCCTAGCTCCGGCGAGGTCGCCATCCGAGCCGGCCGCCATGGATGACGTCATGCCGACGTCATCATCTCCTCTTTTTCCAATTTCTTTTAATAGATTAAAACTTCGGAAAATCATAACTAAATAACCGTAGATCCGTTTCAGGTGGTTCAAGTTGCTAAATTTTTCTAAAATCAAGATCTACATGTTAAAAATATCCACATGTACTGTTTATGCTTGTTTTTGTACTGTTTTGTTGATTTTTGTTTAATTGCTTTAGTTTCCGACGTTCCGGAGGAGAGCGTTTCCGTTGAGGAAGGTTCCGAAGCGTTTGCAGAAGCCCAAGGCAAGTCACACAGATCCCAAACAACCTTTGAGCATGTTGAACCCGTTTAAAGCTATTATTTTATTTCAACTATGCATTGTTTTCGAATGTCATCGGGTGGTGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCCCCCGCCCCAATCATCTCTTCGCGTTCCTGCTTCCGATCTAACTGTATGCTTGCGCTTGTCTAGTTCTTGGCTTCTTGCTCGTTATATATGCTATAGAAGAAATATCTCTTGCGATTCATGTGCTAGCTGGATCTGAATAGCACATTTGTTCCAGATATGCGATATTTTGCATTGATTGGTAGGTAGGTTGATGTTTCATGTTCAATATATGTTTGGTGATATTCTGTCCTTGTTATGTAGCCGTTCAAATGCATCTCGTTGCAGTTTGCAGTCAACAGAGTGATGATACACATATTTTTTTAGTCTTTGTTGCTTTGTAGTGTAATTACAATGCTAGTTTAATCCAGAGGTTCACCTTCTGATCATGTGGTCAGCATTGCCATCAGCATCATTTGTTCGTGTGTATTTTTATTTGGGCAAGATTGTGCCTTATAGCTGCGTCTAGCTGTTTTGCTGTTTATACAGGTGGATATGGTTCTTGGTTAGATCCCAGAAAATATCTGTGGGCTTTGACACAAAGCTCACCTTAGTAAGAGAGAAAATTGTTTGACTAATATGAATAAGCTGAAGCGACTAAATTGTCTAGCCAGATAATTGAAATTGGCATCTGTAGATTTCTGTATAATTCTTAGCATGACTGTATGTGGCTCTGTGATCTTATATCAGATTCTTATCAGTTCTTTTGCTGTTTATCGGTAATTTTTGTCACAAAGTAACCAATGTATATGTGAAGTCAATTCTAGCTTGTTGGTAGCATAGCATGCCATTATCTGTGTATTGTTGATGACTAGTGTATCAACCAAAGCTATACTCGGCATTCATAAGTCATACCATTTTATGTAGTGCTGACCACAATTCTCATACAGGTGATCATTGGTGCCGTTGGTGGTGGTGCCGCGATTGGTGGAGGTGCTGCTGCTGGTGCCGCCTCCGGTGGAGCTGCTGCCGAGGCCCCCAAGGCCGAGGAGAAGGAAGAAGAGAAGGAGGAAAGCGAGGACGACCTCGGATTCTCCCTCTTCGATTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA020585