BGIOSGA020586

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Revision as of 12:48, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA020586| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA020586, complete gene.| tag = OsI_243...")
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Gene Name

BGIOSGA020586

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA020586, complete gene.

LocusTag

OsI_24357

Ensembl Transcript ID

BGIOSGA020586-TA

Ensembl Protein ID

BGIOSGA020586-PA

Length

6367

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:31368482..31374848

Sequence Coding Region

31374819..31374848,31374493..31374753,31374306..31374392,31374074..31374163,31373872..31373998
,31373619..31373719,31373357..31373525,31373123..31373244,31372470..31372598
,31372281..31372379,31372140..31372197,31371990..31372065,31371777..31371903
,31371651..31371696,31371539..31371596,31370431..31370503,31370153..31370347
,31369775..31369868,31368482..31369320

Genome Context

<gbrowseImage1> name=IndicaChromosome06:31368482..31374848 source=RiceIndica06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome06:31368482..31374848 source=RiceIndica06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCCTTGTTTATATACTTCGACTATAAGAAGCAGATTAACATCTTCTTGAGGTACAAGCAGGCAGTTCAGAAGAGAGTTAAATGGGTTGGCGCTGGTAAAAAGGATGCTATATGGACAAAAACACACGAGCGAAATGCTCGTCGTGTTCTCAACCTGATGATAGAGTTAGAAGGTTTATGGGTGAAAATGGGACAATATTTATCCACAAGAGCAGATGTGCTTCCTGAACCCTACATAAATGTCCTCAAGCAGTTGCAGGACTCGCTTCCTCCTCGCCCTCTTGAAGAGGTTCGTGGAACCATAGAGAAAGAACTTGGGAAACCCATGAATGATCTGTTTGCTAATTTTGTGCTGGATCCTCTAGCAACTGCATCAATAGCACAGGTTCATCGTGCAACTCTTGTAGATGGCAGAGAAGTAGTTGTGAAAATCCAACATGATGGTATCAAAGATATCATATTAGAGGATTTGAAGAATGCAAAATCATTAGTTGAATGGATTGCATGGGCAGAGCCTCAATATAATTTTAATCCAATGATAGATGAATGGTGCAAGGAGGCACCAAAGGAACTTGATTTCAACCATGAGGCAGAGAACACAAAGGCTGTCTCCAGTAATCTTAGTCGAAAAACCAATTGCGAGAGTGGTGCTGTCTCTAGTGCTGTTGACGTACTGATTCCAGAAGTTATTCAGTCAACTGATAAGGTTCTAATTTTGCAATATATGGATGGAATTCGTTTGAATGACAATGATTCGTTAGAAGCATATGGTGTTGATAAGCAAAGACTTGTGGAGGAGATAACCCGTGCATATGCTCATCAAATATACGTGGATGGCTTCTTTAACGGCGATCCTCACCCTGGCAATTTTCTTGTTAGCAAGGAACCTCCACACAAGCCGATTCTCCTTGATTTTGGGCTTACTAAACGCATATCTCAATCAATGAGGCAGGCACTAGCAAAGATGTTTTTGTCATGCGCTGAGGGAGACCATGTGGCACTGCTGTCAGCCTTTGCGGAGATGGGGCTTAAGCTGCGGGTTGACATGCCTGAGCAGGCTATGGAGATCGCTACAGTATTTTTTCGGCAGTCCACTACAGCAAATGAAGCAAAGGAGAACATAAAGACATTGAATGACCAAAGAGAACGAAATGTCAAGGCACTTCAAGAAAAGATGAAAATGAATAAAAAGGAGGTTCAACGTTTCAATCCAGTTGATGCTTTCCCTGGTGATGCAATTATATTCATGAGGGTTTTGAATCTTCTTAGAGGGCTATCAGCATCACTAAATGTTAGGATAGTTTATCTAGACATCATGAGGCCATTTGCTGAATCAACTTTGCTAGGGAGTATGACACGTGGGCCCACAGCTAACAGTCAGTGGATTTATGACTCACCTGTTAACTCAGAGGTGGAGTCTAAACTGCGGAACCTTCTGCTTGAGTTGGGAAGCAACAAAATTTTAGGAATACAAGTTTGTGCTTATAAAGATGGAAAGGTCATAATAGATACCGCTGCTGTTTTTTCAGTGACAAAGGGTATCACTGCTGGCATGGTGCATTGGCTTGTTGACAAAGGGAAGTTGAAGTATGAGGAGACTGTTGCCAATATATGGCCAAAATTCGGAACTAACAAAAAAGAGCTAATAAAGGTTCATCATCTTCTGAATCATACATCCGGTTTACATAATGCATTGGGAGATGTGATGAAGAGTGATCCGTTGTTGGTATGTGACTGGGAAGAGATGCTGCACCAGATTACCAAGTGTACGCCGGAAACAGAACCGGGTTCTGAACAAATGTATCACTACTTATCCTTTGGTTGGCTGTGTGGTGGAATCATAGAGCATGCGTCCGGAAAGAAGCTTCAAGAGGTCCTAGAAGAGGCCATTGTTCATCCTCTTCACATTAAGGGGGAGCTATATATTGGCATTCCTCCAGGTGTCGAATCTCGCCTTGCGGCACTGACAGTCGACATGGAGGAGCTCGAGAAGCTGTCAGGATTCAGAGCAGGACCAGACGTCCCACAGGAGCTGCTCAGCAATGTCGCCCAGATGGCCACCGGCCTACCTGTCCTCTTCAACACGCTCAACATCCGCCGCGCCATCCTCCCCGCTGCCAATGGCCACTGCTCGGCGCGCGCTCTGGCTCGATACTACGCCGCGCTGGGGGCAGGCGGCGCCATTCCTCCGCCGCACTCCAGTGGTGGCTCCGAGCCGCCACTCGGCAGCCATGTCCACACCCCCAAGTTCCCCACCATGCCGTCCAAGAAGAAGAAGAAGGGAGGTTCGAAGAATGATGTCGGCGTCGCTGACAAGGACGGGTACACCCAGCTCCGCACCAGCGACGGCAGCGACGAGGGGTCGACGGTGTCAGTGGTGGTGGCCGGGAACGGCAGTGGCAGCGGCAGCAGCATGTTCGTCGACGGCGGCGCCAAGATGCTCGACGCGTTCATGGGCGTCGGCGACTTCTCCGGCATGATCCACCCGAACGGCAAGTTCGGGCTCGGGTTCAGGAGATACGGCTATGGCGCCGGCGCCGGCGAGAAGGTGGCGACGACGACGTTCGGGCACTCCGGGATGGGCGGGTCGACGGGGTTCTGCGACGTGGAGCACGGGCTGGCCATGGCCGTGACGGTGAACAAGATGTCGCTGGGCGGCGTGACGCGGCGCGTGGTCCGGCTGGTGTGCGAGGAGCTGGGCGTGCCGGTGCCCGACGAGTTCTCCGTCGCCGGCGACAAGGGCCCCGACATGGTGCTCAACCTCGCGCCGCCGGAGTAG</cdnaseq>

Protein Sequence

<aaseq>MALFIYFDYKKQINIFLRYKQAVQKRVKWVGAGKKDAIWTKTHERNARRVLNLMIELEGLWVKMGQYLSTRADVLPEPYINVLKQLQDSLPPRPLEEVRGTIEKELGKPMNDLFANFVLDPLATASIAQVHRATLVDGREVVVKIQHDGIKDIILEDLKNAKSLVEWIAWAEPQYNFNPMIDEWCKEAPKELDFNHEAENTKAVSSNLSRKTNCESGAVSSAVDVLIPEVIQSTDKVLILQYMDGIRLNDNDSLEAYGVDKQRLVEEITRAYAHQIYVDGFFNGDPHPGNFLVSKEPPHKPILLDFGLTKRISQSMRQALAKMFLSCAEGDHVALLSAFAEMGLKLRVDMPEQAMEIATVFFRQSTTANEAKENIKTLNDQRERNVKALQEKMKMNKKEVQRFNPVDAFPGDAIIFMRVLNLLRGLSASLNVRIVYLDIMRPFAESTLLGSMTRGPTANSQWIYDSPVNSEVESKLRNLLLELGSNKILGIQVCAYKDGKVIIDTAAVFSVTKGITAGMVHWLVDKGKLKYEETVANIWPKFGTNKKELIKVHHLLNHTSGLHNALGDVMKSDPLLVCDWEEMLHQITKCTPETEPGSEQMYHYLSFGWLCGGIIEHASGKKLQEVLEEAIVHPLHIKGELYIGIPPGVESRLAALTVDMEELEKLSGFRAGPDVPQELLSNVAQMATGLPVLFNTLNIRRAILPAANGHCSARALARYYAALGAGGAIPPPHSSGGSEPPLGSHVHTPKFPTMPSKKKKKGGSKNDVGVADKDGYTQLRTSDGSDEGSTVSVVVAGNGSGSGSSMFVDGGAKMLDAFMGVGDFSGMIHPNGKFGLGFRRYGYGAGAGEKVATTTFGHSGMGGSTGFCDVEHGLAMAVTVNKMSLGGVTRRVVRLVCEELGVPVPDEFSVAGDKGPDMVLNLAPPE</aaseq>

Gene Sequence

<dnaseqindica>1..30#96..356#457..543#686..775#851..977#1130..1230#1324..1492#1605..1726#2251..2379#2470..2568#2652..2709#2784..2859#2946..3072#3153..3198#3253..3310#4346..4418#4502..4696#4981..5074#5529..6367#ATGGCCTTGTTTATATACTTCGACTATAAGGTGTGGTTGTATCACTTCTTCATGCTGTTCTTTCAATAAAAAGTCTCAATCCATTCTACTAGTAGAAGCAGATTAACATCTTCTTGAGGTACAAGCAGGCAGTTCAGAAGAGAGTTAAATGGGTTGGCGCTGGTAAAAAGGATGCTATATGGACAAAAACACACGAGCGAAATGCTCGTCGTGTTCTCAACCTGATGATAGAGTTAGAAGGTTTATGGGTGAAAATGGGACAATATTTATCCACAAGAGCAGATGTGCTTCCTGAACCCTACATAAATGTCCTCAAGCAGTTGCAGGACTCGCTTCCTCCTCGCCCTCTTGAAGAGGTTCATCCTCATAACTAATTTTGCTTCATCTGTAGTCAATCCAAATATTAACATGTAGCTAATCGTAGTCGTTAACTCAATTCTTGTCTCTCATGTTCAGGTTCGTGGAACCATAGAGAAAGAACTTGGGAAACCCATGAATGATCTGTTTGCTAATTTTGTGCTGGATCCTCTAGCAACTGCATCAGTAAGTTCTGTTATATTGGAATGAACTTCTTTCATCTGATGGAAATTCATAGTATGTTTTTTTTGACGAAATCCTCGAGCAACTTGCTAATTTTTTTTGTCATGGTAGTATGTTCATACGAGTCTTCATGTACTTTTGTCAGATAGCACAGGTTCATCGTGCAACTCTTGTAGATGGCAGAGAAGTAGTTGTGAAAATCCAACATGATGGTATCAAAGATATCATATTAGAGGTTTGCCTCTATTCTGAAAAAACGGACTTATGTAAAATGTGCAGGATTGCTATATCATTTTCTTAATGTTGTCAGGATTTGAAGAATGCAAAATCATTAGTTGAATGGATTGCATGGGCAGAGCCTCAATATAATTTTAATCCAATGATAGATGAATGGTGCAAGGAGGCACCAAAGGAACTTGATTTCAACCATGAGGCAGGTAATTACCCCTTTCAGTTCTCATACTCCTCTCTCCATATAAAAGAACATGCATGCTCTTGTGACTCATCCATATTTTTTTTAAAAGTAAAGGTCTAGTCACTAATGAACATATCATCCTGATAATGTATGCTATAAAATCCTTAATTTTAGAGAACACAAAGGCTGTCTCCAGTAATCTTAGTCGAAAAACCAATTGCGAGAGTGGTGCTGTCTCTAGTGCTGTTGACGTACTGATTCCAGAAGTTATTCAGGTCTGAGTTCTTTTACTTCATCCTGTTTGTCATCGTGTCAGTTTTTCCGGTTCAGTTGACAGATCATCTAATCCATTCTTCTTTGTGTACCAGTCAACTGATAAGGTTCTAATTTTGCAATATATGGATGGAATTCGTTTGAATGACAATGATTCGTTAGAAGCATATGGTGTTGATAAGCAAAGACTTGTGGAGGAGATAACCCGTGCATATGCTCATCAAATATACGTGGATGGCTTCTTTAACGGCGATCCTCACCCTGGTATTTCAATTTTATGTGCCTTGAAGAGATCTTCTGTCACCTCAATTTTTTTATTCTCCATCTGTAATTCTTGCAAATTCATTTGTGCTGACAATGCATTATTTTTCTGTAGGCAATTTTCTTGTTAGCAAGGAACCTCCACACAAGCCGATTCTCCTTGATTTTGGGCTTACTAAACGCATATCTCAATCAATGAGGCAGGCACTAGCAAAGATGTTTTTGTCATGCGCTGAGGTTTGACACTTTGATCTTCTAAATAATACATACACAAGGAAACAAATAATGGAGTTAATCAAACATGGTTGTCTTGTTGGCATCTACAAGCTGCAGCCATTTCCATTGGAGTAGATGCGATCTTTTATTATAACAAGAATGGATTTTTGTTTACTTTCCGATCTTTTTGTATCCTAGTTTAGTCCTATCTTTCAGTCTTTACTCATAAGTGGTATTGCAAAGTGGCAGATGAATATCACATTTAACAAGCTATAAGAAAACAAAGACAGAATCTGGAACTAATCTTTATTTTCTTCTCTGCTATGCTTTGGTGTTCCTTGAATCAACTTTGAGACTTAGAAAGTGCACTGGAACGTTAAGTGACCACATGCACTAGTATTTTGACGTGTCAAAATTTGATAATAAAATTTTGTGAGATAGGGTTCTTCGGTTTATTCTACCTTTTGCTGTTTGTGAACCAGTTGCTCATGCTATGATTAAATTTCTTAAACTACATTTCTGATATTTAACATGTCAATGGGTAGGGAGACCATGTGGCACTGCTGTCAGCCTTTGCGGAGATGGGGCTTAAGCTGCGGGTTGACATGCCTGAGCAGGCTATGGAGATCGCTACAGTATTTTTTCGGCAGTCCACTACAGCAAATGAAGCAAAGGTAGGAGGCTACCACTACTGTAATCTGTATCCCTCCTCTTGTATTAATTTGGAAGTTTGGATTAACTGTTTGGTTATGACTTTTCTTTAGGAGAACATAAAGACATTGAATGACCAAAGAGAACGAAATGTCAAGGCACTTCAAGAAAAGATGAAAATGAATAAAAAGGAGGTTCAACGTTTCAATCCAGTGAGTAGGCATGCCTTTTACTTCATATGTGTTTAGTTTGTCAACCAAGAAATAGGTGTTATTGAACATTTTCTCGCCTTTAGGTTGATGCTTTCCCTGGTGATGCAATTATATTCATGAGGGTTTTGAATCTTCTTAGAGGTATGTTTTTCATTCTTTCCTTTGAAATATCCAGTATCATGGTAACATGCTCTCTATTATCTGCACTTATGCAGGGCTATCAGCATCACTAAATGTTAGGATAGTTTATCTAGACATCATGAGGCCATTTGCTGAATCAACTTTGCTAGGGTGAGATGCCTGTTTATCTACTGTTTGCAGGAGCCTTAGAGTAAAGCCTCTTTTTTATTGCTTATTTATGCCTTCGTTGATGGTAGGAGTATGACACGTGGGCCCACAGCTAACAGTCAGTGGATTTATGACTCACCTGTTAACTCAGAGGTGGAGTCTAAACTGCGGAACCTTCTGCTTGAGTTGGGAAGCAACAAAATTTTAGGAATACAAGTAGGTTGATAATCTCATGCGATTCATTTACATGCTATGACTTTGCTTCATTGGTGCCTTACAAATCTTCCTTTTACCAGGTTTGTGCTTATAAAGATGGAAAGGTCATAATAGATACCGCTGCTGGTACGTTAGGGAAGTATGATCCACGTCCTGTTCAACCTGATTCTCTCTTTCCAGTTTTTTCAGTGACAAAGGGTATCACTGCTGGCATGGTGCATTGGCTTGTTGACAAAGGGTGAGTGCTTAATCACAATGCCAAGTTTTTTTTTTCTTAACATGCTAGTGTAAATATGTTTGCAGGCCGTCGTATTACAGTACATTATACTACCTCAGATTCCAAATAAGTCGTTTAGACTTATGCACAAGAATTAAGAAAACAACAGAACTGACTATTTTACCCTACACTATACTACATGAAAGATATGAATCATTTATTTGTTGAGAGAGCTAGCATTTATTTGCCAAGGTCAAGCATGGAAGAGAAGATGAAGAAGTGGCTAGAAGTTCCAAAACGACTTATATTTAGAATTCCTCATCTTAGTAGCTTACTAGTGTATCAAAAATAATATTTGGCCTAACAGTAACGAGCATGGTAGTATGCCACCCTGTTTAAGTAGGCCTCCTCTTGATCTACTAACATTCTAACAAAATAAAGATATTCCATCTTTATATACATGGCAAAGTCACTCACATGCGCAAACAACTTTTATTCTGAAGCATCAAATTGTTGTACCGTATTTCTGTGAGTCTATGTTGAACAATAAAAATGGACATGGAGAATGGGTGCCAGTGTTCCCATGATTAGGCTGAACCATGTTAGTGCAGGTGGCAATCCTTCACAATTATGACATGTGAGTCACTGTTGAAACATAAAATTTAGATTGGTGCAGTGTAGTTTCCTGCAGTTGCATCCACGTTATCCAGGTCACAATATTTCTTGATATTATCTACATTCTAGTGCTTAAAAAGTATAAAGCATCAGATTCTTGTATAAAGCAAGCAACTCCTCTAAATCTCTAACAGTGATGGTACTACAGAGAACATTGAGCATCTTTTCCCTGCTACCTTAGGCTTTTATGTGCATTGCAATCCATTAGTGACAGGCTGAGAAAGGCCTGGGGTCTTCTGGCTAGCACCACAAGATGTGGGCTAGCCGACCCAGGTTCAAGCCTCACCCCTCTTGATAAATTTTGATATGAGAGTCTTTCCTCTCATATCCAGTGTTTTTTTATTATTAGTGACAGGCTGACAGCATACTGTTATCTTTCAGGAAGTTGAAGTATGAGGAGACTGTTGCCAATATATGGCCAAAATTCGGAACTAACAAAAAAGAGCTAATAAAGGTACTAGAACTTCTTTTGTTGTTGTTTGTTGAAACACTGTTTCTTGGGATTAACTGACTCTGATTTGCAATTTTCTACTAAAGGTTCATCATCTTCTGAATCATACATCCGGTTTACATAATGCATTGGGAGATGTGATGAAGAGTGATCCGTTGTTGGTATGTGACTGGGAAGAGATGCTGCACCAGATTACCAAGTGTACGCCGGAAACAGAACCGGGTTCTGAACAAATGTATCACTACTTATCCTTTGGTTGGCTGTGTGGTGGAATCATAGAGGTATGTCTCTCCCGAGCATCACATACACCGAGTTCATTTATTTTCAATGGGAGTACTGAACCTTTTTAACTGGATCAGTGGATCTTTATGGCTTCACATAGTTATACTAATTTTTAATCTGGTTATGGGCTTAATTAAATGCACAGCCCACCAAGTTATATTTTTTTGGTTATGGGCTATTGGCAAAGTAGAGGTAAATAACTGAAAACAACACGTGTTTGTATGTCACTGTTCTGTGTGAACTTAATTTCATGAATCCTAACGCTGATATTTGGTGATAATAGCATGCGTCCGGAAAGAAGCTTCAAGAGGTCCTAGAAGAGGCCATTGTTCATCCTCTTCACATTAAGGGGGAGCTATATATTGGCATTCCTCCAGGTATAACTAACAAAACTTCCCAGTTTAGCTTTCAACAAAATAGGTGTACGCATTGATATAATGATGGATATTTTTTTTTCTACAAATCCATAAACATATTAACCTTTTCGAGACGTGTTCATGTCATATAAGTTTGATGAGTGAAAAAATTGCGCTAGATACTTACCTTTTTTTTGCGGGGTGCTATATTCTTGCTATTATTACTGTTCCAAAGATTATTTGAAAAGAGACTACAATGCATATGTGAAGTACAGTCATGAGTTCGATGCTTGTCCAAAGAACGCATTTTCTCTGTCTCTGGCTTGTTTTGACATGTTCCATAAACATACTCGCTCACGCTTTTGGAGATGTGTTCCATAGGTTTGATGAGTGAAATTGCTGCTATATTCTTACCGTTGTAGATAATATCCTACATGTGAATATGTGATGTTCATCGATTTTCCGCCCTTGTCAGGTGTCGAATCTCGCCTTGCGGCACTGACAGTCGACATGGAGGAGCTCGAGAAGCTGTCAGGATTCAGAGCAGGACCAGACGTCCCACAGGAGCTGCTCAGCAATGTCGCCCAGATGGCCACCGGCCTACCTGTCCTCTTCAACACGCTCAACATCCGCCGCGCCATCCTCCCCGCTGCCAATGGCCACTGCTCGGCGCGCGCTCTGGCTCGATACTACGCCGCGCTGGGGGCAGGCGGCGCCATTCCTCCGCCGCACTCCAGTGGTGGCTCCGAGCCGCCACTCGGCAGCCATGTCCACACCCCCAAGTTCCCCACCATGCCGTCCAAGAAGAAGAAGAAGGGAGGTTCGAAGAATGATGTCGGCGTCGCTGACAAGGACGGGTACACCCAGCTCCGCACCAGCGACGGCAGCGACGAGGGGTCGACGGTGTCAGTGGTGGTGGCCGGGAACGGCAGTGGCAGCGGCAGCAGCATGTTCGTCGACGGCGGCGCCAAGATGCTCGACGCGTTCATGGGCGTCGGCGACTTCTCCGGCATGATCCACCCGAACGGCAAGTTCGGGCTCGGGTTCAGGAGATACGGCTATGGCGCCGGCGCCGGCGAGAAGGTGGCGACGACGACGTTCGGGCACTCCGGGATGGGCGGGTCGACGGGGTTCTGCGACGTGGAGCACGGGCTGGCCATGGCCGTGACGGTGAACAAGATGTCGCTGGGCGGCGTGACGCGGCGCGTGGTCCGGCTGGTGTGCGAGGAGCTGGGCGTGCCGGTGCCCGACGAGTTCTCCGTCGCCGGCGACAAGGGCCCCGACATGGTGCTCAACCTCGCGCCGCCGGAGTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA020586