BGIOSGA020587

From RiceWiki
Revision as of 12:48, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA020587| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA020587, complete gene.| tag = OsI_243...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA020587

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA020587, complete gene.

LocusTag

OsI_24356

Ensembl Transcript ID

BGIOSGA020587-TA

Ensembl Protein ID

BGIOSGA020587-PA

Length

5851

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:31361359..31367209

Sequence Coding Region

31367093..31367209,31366562..31366666,31366171..31366287,31365812..31365952,31365092..31365191
,31364670..31364797,31364487..31364558,31364312..31364376,31364102..31364162
,31363864..31363981,31363529..31363653,31363252..31363300,31362915..31362975
,31362577..31362682,31362424..31362483,31361935..31362015,31361613..31361852
,31361359..31361496

Genome Context

<gbrowseImage1> name=IndicaChromosome06:31361359..31367209 source=RiceIndica06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome06:31361359..31367209 source=RiceIndica06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCTTCCGACGGCAACGGCGCCGCGGCGGTGGCGGCGCTGGGGATCTCCGGCGGCGGGGGCGACGACTGGGCGCCGCCGCTGCGGCGGAATCTCCCGCTGCTCGCGCCCCACGAGGTTAAGCTTGCAAAATTGCTGCTGAGTGAAGGACAGTCACATTTGTTTGAACACTGGCCGGAACCAGGTGTTGATGATGACAAGAAAAGGAACTTCTTTGACCAGGTCTGCCGCCTTAATTCAAGCTATCCTGGTGGGCTGGCATCGTACATCCAGAATGCAAGAAAGCTTTTAGCAGATTCAAAGGCAGGAAAAAATCCATATGATGGCTTCTCACCTTCTGTTCCTTCAGGGGAAGTATTGACCTTTGGTGATGACAACTTTGTTTCGCTTGAAGAAGCTGGGGTAAAAGAAGCCCGCCATGCAGCATTTGTTCTTGTAGCTGGTGGGCTTGGTGAAAGACTTGGTTACAAAGGAATTAAGGTTGCACTTCCCAGGGAAACAACTACTGGAAAATGCTTTCTTCAACATTACATAGAATCTATTCTAGCTTTGCAAGAGGCGAGCTGCAAATTGGTAGAGGGTGAATGCAATACAAAGATCCCATTTGTTATTATGACTTCTGATGACACAAATGCACTAACCGTCAAACTTTTGGAGTCAAACTCCTATTTTGGAATGGAACCATCACAAGTGCACATTCTTAAGCAGGAAAAAGTGGCATGTTTAGCTGATAATGATGCAAGGCTTGCATTAGACCCAAATGACAAGTACAAAATCCAGACAAAGCCACATGGGCATGGAGATGTCCACGCTCTTCTTTATTCAAGCGGCTTGCTTGAGCAATGGAAGAGCACAGGGCGGAAATGGGTTCTCTTTTTCCAGGACACAAATGGATTGCTCTTCAATGCAATACCATCAGCATTAGGTGTCAGCGCCACCAAAGGTTATAATGTTAATTCTCTTGCAGTTCCACGGAAGGCAAAAGAAGCCATTGGAGGAATAACAAAACTTACTCATGTCGATGGTAGAACAATGGTCATCAATGTCGAGTACAATCAGCTTGATCCACTCCTTCGTGCAACCGGACATCCTGATGGAGATGCAAATTGTGAAACAGGGTACTCTCCATACCCTGGAAATATAAACCAGTTGATACTGGAGATTGGACCATATATGGAGGAGCTCCAGAAAACACACGTGGTATCACCAATTCTTGTACTATTGATCATGGAAGTTGTTCTTAGTTACTATGCGACAAGGTATACTGATTCTACCAAGACAGCATTTAAATCGTCCACTCGTCTTGAGTGCATGATGCAGGACTATCCAAAAACACTACCTCCCTCTGCAAAAGTTGGATTTACGGTGATGGATGCGTGGCTTGCTTATGCTCCTGTAAAGAATAATCCTGAAGATGCTGCTAAAGTTCCAAAAGGTAATCCTTACCATAGTGCTACTTCAGGAGAGATGGCAATTTACAGGGCAAACAGCCTTATTTTAAGAAAGGCTGGTGCACAGATAGCTGACCCTGTAATTGATACTTTCAATGGCCAAGAGGTAGAGGTTTGGCCACGCATAACCTGGATCCCAAGGTGGGGTCTTATATTCAAGGATGTCAAAGCCAAAGTCCATAGCAACTCTTCAGTTTCTCAGAGGTCAGCCTTGGTCATCAATGGCAAGAACATCACCATTCAAGGCCTCTCCTTGGATGGCACTCTTATCGTAAATGCCAAAGATGAAGCCAAGTTCAATGTTACAGGTCATATAGAGAATAAAGGCTGGACTATCCAGCACGTCGATCACAAGGACACCTCGGAGAAGGAAGAGATCAGAATCCGCGGGTTCAAGTTCAACAAGGTTGAACAGCTAGAGTTGAACTACTAG</cdnaseq>

Protein Sequence

<aaseq>MASDGNGAAAVAALGISGGGGDDWAPPLRRNLPLLAPHEVKLAKLLLSEGQSHLFEHWPEPGVDDDKKRNFFDQVCRLNSSYPGGLASYIQNARKLLADSKAGKNPYDGFSPSVPSGEVLTFGDDNFVSLEEAGVKEARHAAFVLVAGGLGERLGYKGIKVALPRETTTGKCFLQHYIESILALQEASCKLVEGECNTKIPFVIMTSDDTNALTVKLLESNSYFGMEPSQVHILKQEKVACLADNDARLALDPNDKYKIQTKPHGHGDVHALLYSSGLLEQWKSTGRKWVLFFQDTNGLLFNAIPSALGVSATKGYNVNSLAVPRKAKEAIGGITKLTHVDGRTMVINVEYNQLDPLLRATGHPDGDANCETGYSPYPGNINQLILEIGPYMEELQKTHVVSPILVLLIMEVVLSYYATRYTDSTKTAFKSSTRLECMMQDYPKTLPPSAKVGFTVMDAWLAYAPVKNNPEDAAKVPKGNPYHSATSGEMAIYRANSLILRKAGAQIADPVIDTFNGQEVEVWPRITWIPRWGLIFKDVKAKVHSNSSVSQRSALVINGKNITIQGLSLDGTLIVNAKDEAKFNVTGHIENKGWTIQHVDHKDTSEKEEIRIRGFKFNKVEQLELNY</aaseq>

Gene Sequence

<dnaseqindica>1..117#544..648#923..1039#1258..1398#2019..2118#2413..2540#2652..2723#2834..2898#3048..3108#3229..3346#3557..3681#3910..3958#4235..4295#4528..4633#4727..4786#5195..5275#5358..5597#5714..5851#ATGGCTTCCGACGGCAACGGCGCCGCGGCGGTGGCGGCGCTGGGGATCTCCGGCGGCGGGGGCGACGACTGGGCGCCGCCGCTGCGGCGGAATCTCCCGCTGCTCGCGCCCCACGAGGTGATTTTTTGGCTTGCAACCTGCGACGTCCTGCGTTAGATGTCGGATGGATAGATTGCAGTTTTCTGCTAGAATCGCGTTGCGTGGCCTTGCGGCTGCAAATTTGATTTTTTTTGGGTGATTACGAGTCGTAAGTTTAGGTCCAGTACCAGATGATTTGACGCTAGAACGAATAACTACCTCTGTTTCGTTGGGATTTTGTTCGACAACGTAGTCTTAACTACTTTGCTTCTACTCCTGCAATTTTCATATCAATTCAGTCCCCACCCTACTAGTAAGTTCTACGGGAACACAGTACAAAGTATTGGAAAAAAAATTCCTGAAATTTGTGCTTACAACTGTTTACTCGGAATGGGTAATGTATTGTTTACTTACCATATTTGAGTTGTGTTTTCCATAATGCTTCCTGCCTGGTGGTGATTGTAGGTTAAGCTTGCAAAATTGCTGCTGAGTGAAGGACAGTCACATTTGTTTGAACACTGGCCGGAACCAGGTGTTGATGATGACAAGAAAAGGAACTTCTTTGACCAGGTTTGTCCCTTATTCACAAAACAACAATATTTTTTATAGAATTTTACTGATACTAACACAAAGGCTAAAATACTTTCTTCTTGCTTTCTTGTTGGGATTGCCTCATATGAGGCACCTATAAACCTTCTTTTTTTTTTTGTCGGCTTACTCTAAGAAGCACCATGTCCTCTTACCATTGTTGATATCATCTATAGGCCAAGAAAGCTGAAGAGGCGCTTAAATAACCAAATTGTTATTATTATTTTGAATTTCTGCTAAAATTGTCATTGTTCAGGTCTGCCGCCTTAATTCAAGCTATCCTGGTGGGCTGGCATCGTACATCCAGAATGCAAGAAAGCTTTTAGCAGATTCAAAGGCAGGAAAAAATCCATATGATGGCTTCTCACCTTCTGTAAGTCTTGATGTGTGCTGTTTTTCCATGAATTGGATTCGTGGTGTCATAACTCCTACTGCATAATCTTTCTAATATATGGTGTATAGCTTACTATTGTCAAATCTGAATGATGTTAATTCTTCCCTTTTCTAGTCTGAATCCGTGTGCACTTGCATGTGCATTTTTCTACAATCTGAAATGACTACATGGTGTTCACAGAGGTACCATAATTACAGGTTCCTTCAGGGGAAGTATTGACCTTTGGTGATGACAACTTTGTTTCGCTTGAAGAAGCTGGGGTAAAAGAAGCCCGCCATGCAGCATTTGTTCTTGTAGCTGGTGGGCTTGGTGAAAGACTTGGTTACAAAGGAATTAAGGTAATGTGACCCCAGTTGGAAATACCATTCTTGCAACAAAGCATGAAAATAGCTAGCTTCTTGACTGGTAACTCCAGTTAAAGATTCCCAGTTATGACATGTTGTGATATCCGACCCAAGTTCTAGCAAACAAAAGGGCATATATTTATTACAATTCCAAAGTAGATGCTGTGGTAGTAGAACTAGTGTTTTGCAGTCATGAGGATGTAGTATGATTGTGCTGTTTGGTTGAAACATTTCACCTCTATGCCTCTTATTTTGCTAAGATATATTCACATTAATTGCTGAATCGTCCTATCACAACATCATGCACCACAATTCGTATATGAAAACTAAGATGTTAATGAAAAAAAGGAAGAAAGTGATTACATCTCCACAGTTCCAGCAAATTTCAGTGAGCTTGGAAATTGGATAGGATAGCAAATGTTTTAGCAAGTCAAAGTGTACAGGTAGTCAAGTTGATCTTGTGTGCTTACAAACTAGACTGTCCATCAGGCATTTATTTTGATATGATTGTTAGCAAATCCAGAAATGGGATCATGTAATTTCCCTCTGGACATTATATTGTTGTGCTAAATTCACCTTGATATCAAGCATTCATGGGTAATATCATTGCGCAGGTTGCACTTCCCAGGGAAACAACTACTGGAAAATGCTTTCTTCAACATTACATAGAATCTATTCTAGCTTTGCAAGAGGCGAGCTGCAAATTGGTAGAGGGTATGTGGACTACATTATATGTGCAATGAACTCGTGACTAACAGCAGGGATGATACTTCTTGTTTTGATAAACTAATCTTATCAAAGTATTTTTCTTTCTAATATCGCTGTGGTATTTCTGGTAGGTATTGCCTGTGTTAGCCTTTAGTTATTTCCCTTTGAACTGCTATTGGTTGTTGTGAATGGTTGCTCGATATGTGTTTCCCACTATTTAGACGTTCTTTGGATGGAAAGACTCAAAGACGATTCAGATGTTGATTTGGTTCTGATTGATTTTGTTCCTTGAGCTTGCAGGTGAATGCAATACAAAGATCCCATTTGTTATTATGACTTCTGATGACACAAATGCACTAACCGTCAAACTTTTGGAGTCAAACTCCTATTTTGGAATGGAACCATCACAAGTGCACATTCTTAAGCAGGTAGTCTTCTATCTTGCTATCTCTTCCATGTATTTCTTAGTTAAAATATATTCTTCAGTAGGCACAAAAGTTAGTTTCGCTATTTAATGCTAATGCTTATTATTTTTTCAGGAAAAAGTGGCATGTTTAGCTGATAATGATGCAAGGCTTGCATTAGACCCAAATGACAAGTACAAAATCCAGGTTGCTAATTTTGATACGAGATCTCTATAATTAAGATTTAAATATATGTCACCTATTGTTACCTTTTCTTTTCCTGGAGGTTTCTTAATTTCATTTTTGTGATTTGACAGACAAAGCCACATGGGCATGGAGATGTCCACGCTCTTCTTTATTCAAGCGGCTTGCTTGAGCAATGGTAAATTAATTCAACATTCGTAGTTAGTCGCTTTTTGCCAGTTTGAAGAAGATTAGAAGTAATGTACATGAATTAAATTGCTAAAATAATTATGCTAAGTTCAAATCAATGCATGTCGATCTTGTGTGTTTTATACTACTTTTTTGTAGGAAGAGCACAGGGCGGAAATGGGTTCTCTTTTTCCAGGACACAAATGGATTGCTCTTCAATGTTTGTACTCTTGCTTCCCTACTGTCTTACAATTGAGAGCTTGTTTTTTAGACAAATGCTGGAATGAGTTGACATATGGTATCTGTTAAATTGATATAGATCTTCCCACTGTATTTACAGGCAATACCATCAGCATTAGGTGTCAGCGCCACCAAAGGTTATAATGTTAATTCTCTTGCAGTTCCACGGAAGGCAAAAGAAGCCATTGGAGGAATAACAAAACTTACTCATGTCGATGGTAAATTTTACTACCACCTACTCATGGATTAAGCAGTGGATTCATCGTTCTGGGATCAACATTGTAAATAGAAAAAATATAATTGATCGATCCATAGTGGCATCTAATCACATCAAATTTAACAATGTTTTTTTTTTTCACTTTCTTTTTCCACTTATATTGCTGTTTTGCATTTGTCAAAAATTGACATAGAACCATTCTTATGCATAGGTAGAACAATGGTCATCAATGTCGAGTACAATCAGCTTGATCCACTCCTTCGTGCAACCGGACATCCTGATGGAGATGCAAATTGTGAAACAGGGTACTCTCCATACCCTGGAAATATAAACCAGGTACTTTCTGCCAACTGACCATCCAAACCCCGACTTGAAAGTTTCAAGACATTTTAAAAACATGGTGCTTAACATGAGATGTTGATCAAATATGATTTTCTGATAAATCTATTTACTTGTCGATGTGCATATTGATTAGAAATAAACAACACTCTTCTGTTAGCCATGCATGTTTTGTTGGGACCACTGATTTTTGTTCTACTGATTCTGTGCGTTACACTTCTGCAGTTGATACTGGAGATTGGACCATATATGGAGGAGCTCCAGAAAACACACGGTGCCATTTCGGAATTTGTAAACCCTAAGTAATTTTTCTGCCTACTTACTCCAGTGAAACTATTGCACACTGCTTCTGACTCCCATTTTATTCCAATAGTGGGTTTTTAAGGAAGCAAAACTTCTCTCTTGTTTGTATGCCTCTGATTTCTTTGTGCACACTTCTTTTCCATTTTCACTTCATACTACTGCTACATTTGTTGTGAAAATATTTCCCCTCACTAATGTCAGCTAGTCAGTTCCAATCGATGTGCTGATAATCATCTTATCTTCCCAGTGGTATCACCAATTCTTGTACTATTGATCATGGAAGTTGTTCTTAGTTACTATGCGACAAGGTATTCCTATAGTACCATTAAGGTACTCTGAGCTAGTGCACTGACAAAGTAAACTTCAGAACAAGTTTGCAGCAAACCTGCAAATATTTCGTATAGTCAACGGAGTAGATAAGTCTTGTTTTGAATTTTGTTAGATACAAGTCAGGGCACTTCAAGATTTTGTGAATAAGTTCCTAAAATACTTTTGTTTTCAAATGTTTAACCCCAATCTGTTATCATTTTTTCAATTTAGGTATACTGATTCTACCAAGACAGCATTTAAATCGTCCACTCGTCTTGAGTGCATGATGCAGGACTATCCAAAAACACTACCTCCCTCTGCAAAAGTTGGATTTACGGTATGGGAATGCAAAGTTCATATTGAGCGAGAATTTTTCCGATAATTAATCTGTCTGTTCTCACTTTGCTCTTCTTTTTTCCTTGAATGCTAGGTGATGGATGCGTGGCTTGCTTATGCTCCTGTAAAGAATAATCCTGAAGATGCTGCTAAAGTATGATTTCACTGCCTTTCGAGACTGAAAATTTATATTATAATCATTAAATATTTATGCTCGCATATGAAGTTATGCATCGTGAGAACTGGCCTTGCTCTGAATTTTATGCCGGTGTCAATGAATTATGATTCAGGTTAAAAGTTGTTCCTATAAATCAATAGGCCTGTTGTCAGATTCAACTTGCCCTTCTTTGTGATTCATTGAAAACTACATTTCATCCATACTTCTGAAGATACTAGCTACATACCTGATCTGTGTTTTGATGACGTTAAGAGGTTATGCATCAGTTTGTAGTTTTATACCAACTGCTTTGGTTCAGTTGCTTTACATCAGCTTCCCTTTTCGTTTCCAGTCTAATACTGTACTGCGCATGTGGTCTTCTATCTTCTAATATGCCTTCTGCAGGTTCCAAAAGGTAATCCTTACCATAGTGCTACTTCAGGAGAGATGGCAATTTACAGGGCAAACAGCCTTATTTTAAGAAAGGTGATCACTTTAGAAATATTCTTTTTGGATAGGAAATTGTTTGTGCTCCAGCTTAACACAAGCTCTCTTACACCTTTTCCAGGCTGGTGCACAGATAGCTGACCCTGTAATTGATACTTTCAATGGCCAAGAGGTAGAGGTTTGGCCACGCATAACCTGGATCCCAAGGTGGGGTCTTATATTCAAGGATGTCAAAGCCAAAGTCCATAGCAACTCTTCAGTTTCTCAGAGGTCAGCCTTGGTCATCAATGGCAAGAACATCACCATTCAAGGCCTCTCCTTGGATGGCACTCTTATCGTAAATGCCAAAGATGAAGCCAAGGTAATAAAAATACAAACGCATTCGAATTACCAACTCGTAAATGACATGAATACCGAAAACGCAAACAATTTAGTCATATTTGACTGATGGATTATTCATACGACACCCGTTTTCAGTTCAATGTTACAGGTCATATAGAGAATAAAGGCTGGACTATCCAGCACGTCGATCACAAGGACACCTCGGAGAAGGAAGAGATCAGAATCCGCGGGTTCAAGTTCAACAAGGTTGAACAGCTAGAGTTGAACTACTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA020587