BGIOSGA020623

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Revision as of 12:49, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA020623| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA020623, complete gene.| tag = OsI_242...")
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Gene Name

BGIOSGA020623

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA020623, complete gene.

LocusTag

OsI_24282

Ensembl Transcript ID

BGIOSGA020623-TA

Ensembl Protein ID

BGIOSGA020623-PA

Length

2617

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:30888485..30891101

Sequence Coding Region

30888630..30891101,30888485..30888520

Genome Context

<gbrowseImage1> name=IndicaChromosome06:30888485..30891101 source=RiceIndica06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome06:30888485..30891101 source=RiceIndica06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCAGAGGCAATTATATCGAGCTTCGCAATCTCGGTTCTTACAAAAGCTGCGTCTTTTGGCACTGACTGGGCTGTTAATGAGATCAAGTCAGCCTGGAATGTCAAGAAAGAACTCGGGAAGTTGGAAAGGTCGCTGAGATCCATATGTGCTGTTCTCAGAGATGCTGAATGCAAGCAGTCTACATCTTATGCCCTTCAAGAATGGCTGAATAATTTGAAGGATGCAGTCTATGACATAGATGATGTTTTGGATGATGTGGCCACTGAAGCTCTAGAGCAAGAAATTTATAAAGGTTTCTTCAATCAAGCAAGCCACATGCTTGCTTATCCTTTCAAACTGAGTCACAAAATAAAACGAGTTCATGACAAACTCAATGAGATAGCAGATAACAGAGCTCGTTTTGGATTAACTGAGCAGCCAATTGATGTCCAGGCACCCAGGAACAACAAAAGGGAAACTTATCCCTCAATCAGTGAACTAGACATTATTGGAAGAAATGAGGCAGAAGATGAGATTGTCAAAATTGTACTGAGAGCTGCAGACTCGTATACATTTTCAGTGCTTCCTATTGTTGGGCTAGGGGGCATAGGAAAAACGGCGCTAGCAAAGTTAGTATATACCAATGCTGAGATTAAAAGTAAGTTTGAGAAGACGTTATGGGTCTGTGTATCAGATGATTATAATAAAAAAAAGATCTTGGAGGATATAATAAAATGGGATACTGGTGAAATCTGCAAGGATCTAGGTTTGGTGAAGAGAAAGGTGTATGAGCTTTTAAAAGAGAGGAAGTATTTTCTAGTATTAGATGATCTGTGGAATGATAGAGTTACTGATTGGGAGGAGTTGAGAAGCTTACTATCCATTGGCAATCAAGGAAGTGTGATCATTGTCACCACACGTAATACAAATGTTGCAGCGGTGGTGAAGACCATAGAACCATATGATGTAGAAAAACTGCCTTTTGATAAGTGCATGGAGATATTTAGTCGGTATGCATTCAAAGGTGACTGTGAGAAGGACCAGCAGTTGTTAGGAATCGGGATGTCCATTGTGCAGAAGTGTTGTGGTGTTCCTTTGGCAGCCAGGACGCTAGGTTCTCTGTTATCTAGTTGTCGAGATGTTGAAGAATGGCTCCGGATTATGGGAGACAATCTATGGAATATTAAGCAAGACGAAGATGATATCTTACCAATATTAAAATTAAGTTACAACGCACTTCCAAGTCATTTACAAGCATGCTTTTCTTGCTTATCAGTTTTTCGGAAGGGCCACTTTATTTACCCTGATATTGTGATTACATTTTGGATGGCATTGGGATTGATTCATACACCTAATGGAAAAAATCAGGTACATGTCGGACAAAGATATTTTAGTGAACTTCTTGGAAGATCTCTATTCCAAGAACAGGACATTCTTTGCGATGACACTGTTGCTTGTAAAGTGCACGATCTTATTCATGATCTTGCAATATCAGTGTCCCAAAGGGAGTATGCCATTGTTAGTTGGGAGAAGGCTGCTGTCTCCGAAAGTGTCAGGCACCTAGTTTGGGACCGTGAGGACTCTTCAGCAGTACTCAAATTTCCAAAGCAATTGAGGAAGGCATGTAAGGCAAGATCATTTGCAATCAGAGACCGAATGGGTACCGTGAGTAAATCGTTTCTTCATGATGTTTTCTCGAATTTCAAACTCCTACGTGCTTTGACATTCGTCTCAGTTGATTTTGAAGAGCTTCCAAATTCAGTTGGAAGTTTGAAGCACCTGAGGTACCTGCATATGACATTTAATAGGAAAATCAAGTCACTGCCGAATTCCTTATGTAAGTTGGTGAATTTGCAAACACTTCATCTCCTTTGCTGTAACCAATTAGAGGAGCTTCCAACAAATGTGCATCAACTTGTCAACCTTGTGTACTTAAACCTGACATCAAAGCAGATCTCTCTATTTAAAAGTGGATTTTGTGGTTGGTCCTCCCTAGAACTTCTAAAACTGAGTTACTGCTCAGAGCTGACATCGTTGGAAGAGGGCTTTGGCAGCCTTACTGCCCTCCGAGAACTAGAGATTTGGGAATGTCCAAAGTTGGCTTCCCTCCCATCTAGCATGAAACATATCTCAGCAACACTTCGGAAACTGTGTATTCATAGCTGTGAAGAGCTAGATCTTATGGAACCAGCTGAAGCATTGAGTGGGCTGATGAGTCTTCACAAACTCACACTCACTGAGCTTCCAAAGTTGATGGGTTTTCCTGAGAGCTTTAAATCTGCTGCATCCTCTCTTCGGTATGTTCATATTGATGCGTGCGAAGGGTTGGAGAAGTTGCCAAGCTGCATTGCAGAATTCAGTTCACTCAGGGAAGTTAGGATCTACAACTGCCCTGCATTAAGCACAAGATGTGGAGACGTATCTGGAGAGGATTACCATCTCATCTGCCATGTTCCTGAGATATACATCGATGACATACTCTTGTCAGAAGTTGACTATCTTCAACTTTCAAATTCTACCCCCTAA</cdnaseq>

Protein Sequence

<aaseq>MAEAIISSFAISVLTKAASFGTDWAVNEIKSAWNVKKELGKLERSLRSICAVLRDAECKQSTSYALQEWLNNLKDAVYDIDDVLDDVATEALEQEIYKGFFNQASHMLAYPFKLSHKIKRVHDKLNEIADNRARFGLTEQPIDVQAPRNNKRETYPSISELDIIGRNEAEDEIVKIVLRAADSYTFSVLPIVGLGGIGKTALAKLVYTNAEIKSKFEKTLWVCVSDDYNKKKILEDIIKWDTGEICKDLGLVKRKVYELLKERKYFLVLDDLWNDRVTDWEELRSLLSIGNQGSVIIVTTRNTNVAAVVKTIEPYDVEKLPFDKCMEIFSRYAFKGDCEKDQQLLGIGMSIVQKCCGVPLAARTLGSLLSSCRDVEEWLRIMGDNLWNIKQDEDDILPILKLSYNALPSHLQACFSCLSVFRKGHFIYPDIVITFWMALGLIHTPNGKNQVHVGQRYFSELLGRSLFQEQDILCDDTVACKVHDLIHDLAISVSQREYAIVSWEKAAVSESVRHLVWDREDSSAVLKFPKQLRKACKARSFAIRDRMGTVSKSFLHDVFSNFKLLRALTFVSVDFEELPNSVGSLKHLRYLHMTFNRKIKSLPNSLCKLVNLQTLHLLCCNQLEELPTNVHQLVNLVYLNLTSKQISLFKSGFCGWSSLELLKLSYCSELTSLEEGFGSLTALRELEIWECPKLASLPSSMKHISATLRKLCIHSCEELDLMEPAEALSGLMSLHKLTLTELPKLMGFPESFKSAASSLRYVHIDACEGLEKLPSCIAEFSSLREVRIYNCPALSTRCGDVSGEDYHLICHVPEIYIDDILLSEVDYLQLSNSTP</aaseq>

Gene Sequence

<dnaseqindica>1..2472#2582..2617#ATGGCAGAGGCAATTATATCGAGCTTCGCAATCTCGGTTCTTACAAAAGCTGCGTCTTTTGGCACTGACTGGGCTGTTAATGAGATCAAGTCAGCCTGGAATGTCAAGAAAGAACTCGGGAAGTTGGAAAGGTCGCTGAGATCCATATGTGCTGTTCTCAGAGATGCTGAATGCAAGCAGTCTACATCTTATGCCCTTCAAGAATGGCTGAATAATTTGAAGGATGCAGTCTATGACATAGATGATGTTTTGGATGATGTGGCCACTGAAGCTCTAGAGCAAGAAATTTATAAAGGTTTCTTCAATCAAGCAAGCCACATGCTTGCTTATCCTTTCAAACTGAGTCACAAAATAAAACGAGTTCATGACAAACTCAATGAGATAGCAGATAACAGAGCTCGTTTTGGATTAACTGAGCAGCCAATTGATGTCCAGGCACCCAGGAACAACAAAAGGGAAACTTATCCCTCAATCAGTGAACTAGACATTATTGGAAGAAATGAGGCAGAAGATGAGATTGTCAAAATTGTACTGAGAGCTGCAGACTCGTATACATTTTCAGTGCTTCCTATTGTTGGGCTAGGGGGCATAGGAAAAACGGCGCTAGCAAAGTTAGTATATACCAATGCTGAGATTAAAAGTAAGTTTGAGAAGACGTTATGGGTCTGTGTATCAGATGATTATAATAAAAAAAAGATCTTGGAGGATATAATAAAATGGGATACTGGTGAAATCTGCAAGGATCTAGGTTTGGTGAAGAGAAAGGTGTATGAGCTTTTAAAAGAGAGGAAGTATTTTCTAGTATTAGATGATCTGTGGAATGATAGAGTTACTGATTGGGAGGAGTTGAGAAGCTTACTATCCATTGGCAATCAAGGAAGTGTGATCATTGTCACCACACGTAATACAAATGTTGCAGCGGTGGTGAAGACCATAGAACCATATGATGTAGAAAAACTGCCTTTTGATAAGTGCATGGAGATATTTAGTCGGTATGCATTCAAAGGTGACTGTGAGAAGGACCAGCAGTTGTTAGGAATCGGGATGTCCATTGTGCAGAAGTGTTGTGGTGTTCCTTTGGCAGCCAGGACGCTAGGTTCTCTGTTATCTAGTTGTCGAGATGTTGAAGAATGGCTCCGGATTATGGGAGACAATCTATGGAATATTAAGCAAGACGAAGATGATATCTTACCAATATTAAAATTAAGTTACAACGCACTTCCAAGTCATTTACAAGCATGCTTTTCTTGCTTATCAGTTTTTCGGAAGGGCCACTTTATTTACCCTGATATTGTGATTACATTTTGGATGGCATTGGGATTGATTCATACACCTAATGGAAAAAATCAGGTACATGTCGGACAAAGATATTTTAGTGAACTTCTTGGAAGATCTCTATTCCAAGAACAGGACATTCTTTGCGATGACACTGTTGCTTGTAAAGTGCACGATCTTATTCATGATCTTGCAATATCAGTGTCCCAAAGGGAGTATGCCATTGTTAGTTGGGAGAAGGCTGCTGTCTCCGAAAGTGTCAGGCACCTAGTTTGGGACCGTGAGGACTCTTCAGCAGTACTCAAATTTCCAAAGCAATTGAGGAAGGCATGTAAGGCAAGATCATTTGCAATCAGAGACCGAATGGGTACCGTGAGTAAATCGTTTCTTCATGATGTTTTCTCGAATTTCAAACTCCTACGTGCTTTGACATTCGTCTCAGTTGATTTTGAAGAGCTTCCAAATTCAGTTGGAAGTTTGAAGCACCTGAGGTACCTGCATATGACATTTAATAGGAAAATCAAGTCACTGCCGAATTCCTTATGTAAGTTGGTGAATTTGCAAACACTTCATCTCCTTTGCTGTAACCAATTAGAGGAGCTTCCAACAAATGTGCATCAACTTGTCAACCTTGTGTACTTAAACCTGACATCAAAGCAGATCTCTCTATTTAAAAGTGGATTTTGTGGTTGGTCCTCCCTAGAACTTCTAAAACTGAGTTACTGCTCAGAGCTGACATCGTTGGAAGAGGGCTTTGGCAGCCTTACTGCCCTCCGAGAACTAGAGATTTGGGAATGTCCAAAGTTGGCTTCCCTCCCATCTAGCATGAAACATATCTCAGCAACACTTCGGAAACTGTGTATTCATAGCTGTGAAGAGCTAGATCTTATGGAACCAGCTGAAGCATTGAGTGGGCTGATGAGTCTTCACAAACTCACACTCACTGAGCTTCCAAAGTTGATGGGTTTTCCTGAGAGCTTTAAATCTGCTGCATCCTCTCTTCGGTATGTTCATATTGATGCGTGCGAAGGGTTGGAGAAGTTGCCAAGCTGCATTGCAGAATTCAGTTCACTCAGGGAAGTTAGGATCTACAACTGCCCTGCATTAAGCACAAGATGTGGAGACGTATCTGGAGAGGATTACCATCTCATCTGCCATGTTCCTGAGATATACATCGATGACATACTCTTGTCAGAAGTAAGCTGCAAGTCTATCTGCTCCATAATGTTCTCCAGTCTATTCAGTCCATCATTGTTTACATTTTCTTTTTAGGATTAAGTCTACATAACCCCCTGAACTATTGTAGGTTGACTATCTTCAACTTTCAAATTCTACCCCCTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA020623

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA020623&oldid=43148"