BGIOSGA020625

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Revision as of 12:49, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA020625| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA020625, complete gene.| tag = P0532H0...")
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Gene Name

BGIOSGA020625

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA020625, complete gene.

LocusTag

P0532H03.36

Ensembl Transcript ID

BGIOSGA020625-TA

Ensembl Protein ID

BGIOSGA020625-PA

Length

4108

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:30863007..30867114

Sequence Coding Region

30867098..30867114,30866846..30866990,30866342..30866425,30865946..30866062,30865628..30865858
,30865338..30865532,30864759..30865243,30864366..30864465,30863970..30864029
,30863789..30863881,30863580..30863699,30863007..30863330

Genome Context

<gbrowseImage1> name=IndicaChromosome06:30863007..30867114 source=RiceIndica06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome06:30863007..30867114 source=RiceIndica06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGCGCTCCGTGACCCTGGGCGGCTCGATCCAGAGGGTGATGCGGAGGATTGGCGGCGGCGGCGGCGGCGGTGGCCGGAGATCGGCCGGGTCGAGGGGCGCGCCGCAGCGGGCGGAATGCCTGGGGGCGGGGAGCGGCGACGCGTCGGCGAGCTGCTCCGGGGATGATAGTAGCAATGGCACTGCCAAGAGGGATGGAAGCAGAAGGGTAAGGATGCGGCGGTACAGATCGGAGCTCGAGCAAGAAGTAAAGAAACTGCAGAGGCAACTGGAAGAAGAGATTGACTTGCAGTTGGCATTAACAGATGCCATCACAAATAATGCTACACTGATACTTGAGCCCTCTGCAAAGCTTCCAAACAAGGCACAGGAGCTAATAATTAGCATAGCCTCCTTGGAGAATATTGTCTCAAAACTTGAAAAAGACCTAAATGACTTATGTTACCAACTGTGTCATTTAAGGGACAATACGCGACTTGCAGAAAATAATTCCAGATACTTAGAAACTCTAGCTGAAGAAAATAATTCCAGATGTCTACTGTCTGCATCATTACAGTCCCAACCACCGTCAACTTGTAAATGCACAGGGGAGGAAGGCATATCAACACTAAGAGATACAAAGCTCGGAGAATCTGAGTCAATGCAAGAAAATTTATTCCCTGGGCTTGAGGACCAACAGAACATTCAAAAAGAGAGTGAAGGGAGAGAGATATTATCTCAAGATGGGCTTCTCGAAGAGCATCAAGATGTTCCTTCAAATAGATTGTTGGAAAAACACTGGGACGAAGAGATGCAAGAGTCCTATCCTATGGAAAATGGAGGCAGAGAATATCAGATAATAGATGCATTATCATTTGACCAATCTTATCAGAGGAAAAGCAGCATCAACAGTAATGTGTGGAATGGCAATCCAAATAAGCTCTCTGAAGAGATGGTGCGCTGTATGAGAGATATCTTCCTTCGTTTATCTGACTCATCATCCGAGATATCACCAAAGGGGTCTTCTGTTAATTCGATTTCATCAACAGAACGTCTATCTGGCTGTACATTGACATCTGTATCAGATTCATCCTTGATGGCATCAGTGATGCAAAGCCCTTCAGTTGATTCAAACCATGACAGTATCGATGAAGTTAGATACTTCGATCCCTACAATGTTAATGGCAAGGAGGTTCGAAGAGACATTGGGAACTATTGTTCAGTAGCTGAGGTGTCTTGGATGTATGTTGGCAAGGAACAGCTTGCATATGCATCTGAAGCTCTAAAAAATTTCAGGAATCTCGTGGAGCAACTATCAAAGGTTGACCCTACATGTATGAACTGTGATGAGCGGTTAGCGTTTTGGATTAACCTGTACAATACGTTGATAATGCATGCATATTTGGCCTATGGGGTTCCAGAAAACGACATCAAGCTCTTCTCACTAATGCAAAAGGCCTGTTACATTGTCGGTGGGCAGTCCTTCAGCGCAGCAGAAATAGAGTTTGTGATTCTGAAGATGAAGACTCCAATACACCGGCCACAACTTTCGTTGATGTTGGCCCTTCACAAGTTCAGAGTTACCGAGGAGCACAAGAAATATTCGATCGATGATGCAGAGCCCCTCGTGTTGTTTGGCCTTAGCTGTGGAATGTTCTCATCACCTGCTGTCAGGATTTTCTCAGCTGGGAATGTTCGGCAGGAGCTTCAGGAATCAATGAGAGACTACATCCGAGCATCGGTCGGTATAAACGACAGCGGGAAGCTCATCGTCCCAAAGCTGCTTCAGAGCTATGCCAAGGGCACCGTGGAGGACTCTCTGCTCGCCGACTGGATCTGCCGTCACCTCACACCAAACCAGGTCGCAGCTGTCCAAGACACTTCGTCGTCGCGGAAACAGCGGCTTCTTGGTGTGCGCAGCTTCAGCGTCGTTCCATTTGACTCAAAATTCCGGTATCTGTTCTTGCCTGACAACAGTAGCTCCCAGCACTGA</cdnaseq>

Protein Sequence

<aaseq>MRSVTLGGSIQRVMRRIGGGGGGGGRRSAGSRGAPQRAECLGAGSGDASASCSGDDSSNGTAKRDGSRRVRMRRYRSELEQEVKKLQRQLEEEIDLQLALTDAITNNATLILEPSAKLPNKAQELIISIASLENIVSKLEKDLNDLCYQLCHLRDNTRLAENNSRYLETLAEENNSRCLLSASLQSQPPSTCKCTGEEGISTLRDTKLGESESMQENLFPGLEDQQNIQKESEGREILSQDGLLEEHQDVPSNRLLEKHWDEEMQESYPMENGGREYQIIDALSFDQSYQRKSSINSNVWNGNPNKLSEEMVRCMRDIFLRLSDSSSEISPKGSSVNSISSTERLSGCTLTSVSDSSLMASVMQSPSVDSNHDSIDEVRYFDPYNVNGKEVRRDIGNYCSVAEVSWMYVGKEQLAYASEALKNFRNLVEQLSKVDPTCMNCDERLAFWINLYNTLIMHAYLAYGVPENDIKLFSLMQKACYIVGGQSFSAAEIEFVILKMKTPIHRPQLSLMLALHKFRVTEEHKKYSIDDAEPLVLFGLSCGMFSSPAVRIFSAGNVRQELQESMRDYIRASVGINDSGKLIVPKLLQSYAKGTVEDSLLADWICRHLTPNQVAAVQDTSSSRKQRLLGVRSFSVVPFDSKFRYLFLPDNSSSQH</aaseq>

Gene Sequence

<dnaseqindica>1..17#125..269#690..773#1053..1169#1257..1487#1583..1777#1872..2356#2650..2749#3086..3145#3234..3326#3416..3535#3785..4108#ATGCGCTCCGTGACCCTGTCAGTCTCCTGCTGCTTAATTTACCTGCTTCTCATGGATGTTTGCTGTTGGCCCGTCTCCTCAAGGTTTGGTTCTTTCCTCGCTGTGCGCGCGCGTGTGTGTGCAGGGGCGGCTCGATCCAGAGGGTGATGCGGAGGATTGGCGGCGGCGGCGGCGGCGGTGGCCGGAGATCGGCCGGGTCGAGGGGCGCGCCGCAGCGGGCGGAATGCCTGGGGGCGGGGAGCGGCGACGCGTCGGCGAGCTGCTCCGGGGTTGGTTTTTGTCTTTGATCAAATTAAAGCCCACTTCGTTCTTGTTGCCAAGCATTTGTGCAATGGGCGTGCAATTTCTTGGTTCCTCCTGCGAAGATTGTTGTTCTGAAAACTCGCAAATGTGGTGTTTTTGGGTGCATCCTGGGGACTGGGCAGTTTCAGACGACAAGATATCTGTGTTCGAGTGCCAAATTTGAGGGGCCCAGATGAAATGTCACTTTCCCCTCTGTGTTCTTCGCATTTCTAGTGTAGTAGATGCATAGGTTTTGACTGCTTGTTTGCTGCATTCTGAACTAAATTTCTTTTGGATGGATTCTGTCCCGGCAGGTGTCCTAGACTGGGGATTTTGTTTGTTTCCTGTTCTTTTGGACAGTTTCAGGTGATATGTGAACCTGATTGCTATCTGTGTTTCCTCTGTAGGATGATAGTAGCAATGGCACTGCCAAGAGGGATGGAAGCAGAAGGGTAAGGATGCGGCGGTACAGATCGGAGCTCGAGCAAGAAGTGAGTGCTTTTCTTGGTGTAATTCTACTCGTGTTTGAGTTCTGACGACTTTTGTTCCTGTTGTTCAATGAAAGTTGGTACTGATGGGGCTAGCTAGTATAGGCCGTGGCACTATCCAATGCTTCATTGAAAATTTATTCATAGAGTGGTCCTCAAATGAAGTCTAATATTTGCTACCTAATGTTTGATAAAAATTTAGTTACTCTGACGGAACTATATTTGCATCTCAAATGAGTAAGGACTAAGAGCTAATATTCTCTGATGTCATACATATTTCAGGTAAAGAAACTGCAGAGGCAACTGGAAGAAGAGATTGACTTGCAGTTGGCATTAACAGATGCCATCACAAATAATGCTACACTGATACTTGAGCCCTCTGCAAAGCTTCCAAACAAGGTACATGTGCATTTTAGTGGATATTTTGCATGTGTATCTAGATAGCCACTCTTTAATATATTTGCTACTTCAATATTTCATGTGCAGGCACAGGAGCTAATAATTAGCATAGCCTCCTTGGAGAATATTGTCTCAAAACTTGAAAAAGACCTAAATGACTTATGTTACCAACTGTGTCATTTAAGGGACAATACGCGACTTGCAGAAAATAATTCCAGATACTTAGAAACTCTAGCTGAAGAAAATAATTCCAGATGTCTACTGTCTGCATCATTACAGTCCCAACCACCGTCAACTTGTAAATGCACAGGGGAGGAAGTAAGTCTTTATTATGGAAATGGTCTCATTTTATAGTGCTTCTTTTGGCATTCAAATACCAACAGTTTTTTTTCCCCTTTTCTGAACTTTTGAAGGGCATATCAACACTAAGAGATACAAAGCTCGGAGAATCTGAGTCAATGCAAGAAAATTTATTCCCTGGGCTTGAGGACCAACAGAACATTCAAAAAGAGAGTGAAGGGAGAGAGATATTATCTCAAGATGGGCTTCTCGAAGAGCATCAAGATGTTCCTTCAAATAGATTGTTGGAAAAACACTGGGACGAAGAGGTTTATATTTATCAGTATTAGGAAAACTTGAATTTATGCTTTATCAAAATATTTTAAGTTTTCAAAAAGTAAATTTTAGCTTGTTTCTTGGCAGATGCAAGAGTCCTATCCTATGGAAAATGGAGGCAGAGAATATCAGATAATAGATGCATTATCATTTGACCAATCTTATCAGAGGAAAAGCAGCATCAACAGTAATGTGTGGAATGGCAATCCAAATAAGCTCTCTGAAGAGATGGTGCGCTGTATGAGAGATATCTTCCTTCGTTTATCTGACTCATCATCCGAGATATCACCAAAGGGGTCTTCTGTTAATTCGATTTCATCAACAGAACGTCTATCTGGCTGTACATTGACATCTGTATCAGATTCATCCTTGATGGCATCAGTGATGCAAAGCCCTTCAGTTGATTCAAACCATGACAGTATCGATGAAGTTAGATACTTCGATCCCTACAATGTTAATGGCAAGGAGGTTCGAAGAGACATTGGGAACTATTGTTCAGTAGCTGAGGTGTCTTGGATGTATGTTGGCAAGGAACAGCTTGCATATGCATCTGAAGCTCTAAAAAATTTCAGGTTTCCTTATTAAACTCTATCTGTAGCTATCAACACTAATGAATTTCATTTCATGTCTAAATAAATAGCCTAGACCAATTTAGAAAAGCAAAACTATAGCAATAATTAAGCATGAGAGAAAAATGCTACAGCGGAAGATTCAGTTATTACAAAAAATTCTTCAGTGATTGTTTCTACCTTGTAGTGCAAAGTAGCACTACTTGGTGTTACGTTTGTGAATAAATGATGGACACTATATTATACATGACTTCGATACGATTGCTATTAATTGTTTAAATTACTCTCGTCTGCAGGAATCTCGTGGAGCAACTATCAAAGGTTGACCCTACATGTATGAACTGTGATGAGCGGTTAGCGTTTTGGATTAACCTGTACAATACGTTGATAATGCATGTAAGTATCGGTTCAAATAAAAATGTATGCAAGTATTATCCACTAGATTGCATGGAAATATGATGTTATAATTAGTTATTAGCAAAACAATGTGCCCTTTTTTTTATGAAGTGATAATTTTGAAGGCGGTGTTGTGTCGTATATGCCACTGTGGTGTTCTGTTGTAATTTCAGTTTCTTAGTGTATGCTACCGTGGTGATTTCTCATTGAAATAGTATTCTAAAAAAAAAATCTCATTGAAGTAGCAGTTCCTGCTCTTTGTCTGCACTGTTCTTTATTTTGGGCCATGCATTACCTACTCTCATGTGTTGTGCATGTTCTATTTGAGTTTACCAGGCATATTTGGCCTATGGGGTTCCAGAAAACGACATCAAGCTCTTCTCACTAATGCAAAAGGTTTGTCATCTTTGGCTCTTATTTAAAGATATCATTGGCTTTATAATCATGGTTCTTTAATAAGATGTTAACCAACTTGGTATTGCAGGCCTGTTACATTGTCGGTGGGCAGTCCTTCAGCGCAGCAGAAATAGAGTTTGTGATTCTGAAGATGAAGACTCCAATACACCGGCCACAACTTGTATATGCACTCTGCTCTTCATTGTCATCTCCTTTCTTCCTTTTTGGCATGCAAGTCGCAGTGAAGCTTATTGTTTTCTCGTTTTTCAGTCGTTGATGTTGGCCCTTCACAAGTTCAGAGTTACCGAGGAGCACAAGAAATATTCGATCGATGATGCAGAGCCCCTCGTGTTGTTTGGCCTTAGCTGTGGAATGTTCTCATCACCTGCTGTAAGTATATTTACCTTTTATCTTGGTTTTGTCATCTCAACATGTATACGGACAATCTTTTGAAGAAGCTAAAAGTTACCAGTATGTTTCAGGATTACCTTATAGTGTTATACGCCTCTGAATATATTCACTCTTGCCTGAAACACACATAAATTTTCTTTTATGTGCCAGTATTTATAACAAAAAAAAACTGTCATTTTCATGCCTATCCTCATTTCCAAAATGAAATGTGCGTTTGCTGTCAAACAGGTCAGGATTTTCTCAGCTGGGAATGTTCGGCAGGAGCTTCAGGAATCAATGAGAGACTACATCCGAGCATCGGTCGGTATAAACGACAGCGGGAAGCTCATCGTCCCAAAGCTGCTTCAGAGCTATGCCAAGGGCACCGTGGAGGACTCTCTGCTCGCCGACTGGATCTGCCGTCACCTCACACCAAACCAGGTCGCAGCTGTCCAAGACACTTCGTCGTCGCGGAAACAGCGGCTTCTTGGTGTGCGCAGCTTCAGCGTCGTTCCATTTGACTCAAAATTCCGGTATCTGTTCTTGCCTGACAACAGTAGCTCCCAGCACTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA020625