BGIOSGA020626

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Revision as of 12:49, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA020626| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA020626, complete gene.| tag = P0532H0...")
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Gene Name

BGIOSGA020626

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA020626, complete gene.

LocusTag

P0532H03.34

Ensembl Transcript ID

BGIOSGA020626-TA

Ensembl Protein ID

BGIOSGA020626-PA

Length

3428

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:30858101..30861528

Sequence Coding Region

30861350..30861528,30858452..30860495,30858101..30858187

Genome Context

<gbrowseImage1> name=IndicaChromosome06:30858101..30861528 source=RiceIndica06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome06:30858101..30861528 source=RiceIndica06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGTGGCGCCGTGCGCGGCCTCGCCGACGAGGGAAAATGTCTCCAGTGACCTCCCGTGCGGCATGACCGGCGAGCGCGGCGACCTCCTCGCCCGCCTCGCCGGCGGGCGCGGTGTCCTCTTCGACGGCGTGACCGCGCGAGTAGTAGCGCGGCAGCATCTCCCGGCGCGGCGTGAACGCTCCTGCACGGAGCAGGAGGAGAGCTCCCTCATCGGCTTCCTAGATGGTCTCTTGCAAGGTGGCAATGGCAGCCTCTGCATGTCATGGGTGAAGAGGACAGACTGCTGTAAATGGGAAGGCATCACCTGCAGCAGTGATGGCACAGTCACAGATGTCTTGCTGGCTGCTAAGGGCCTCCAAGGGCACATCTCGCCATTGCTCGGCAATCTTACTGGGCTGTTGCACCTCAACCTGTCTCACAACTTACTCAATGGCAACCTACCGATGGAATTGTTGTTCTCCAGAAGCATCATCGTCCTTGACGTTAGCTTCAACCGCCTAGATGGTTCTCTGCCAGAGTTGCAGTCCTCTAGTGGTGGTTTTCCTCTCCAGGTACTGAATATCTCAAGCAATTTATTTACAGGGCAGTTCTCATCCAAACTGTGGGAGGCGATGAAGAATATTGTTGCTCTTAATGCAAGCAACAACAGCTTTACAGGACAGATACCATCTTCTATCTGCATCAACTCCCCATCACTTGCTATCCTTGACCTTTCTTACAACCAATTCAGTGGCAGTATTCCTCCGGAGCTTGGAAATTGCTCCAAGCTGAGAGAGTTCAAGGCTGGCTACAACAATTTTAATGGAGCTCTCCCTGAAGAACTCTTCAGTGCTACCTCGTTGGAGCACTTGTCTCTTCCTAGCAATGATTTACAGGGAGTTCTTGATGGTTCTGACATATTAAAACTCGTCAAGCTGACTGTCCTTGATCTCGGATCGACTGGGCTCAGTGGGAACATCCCGGATTCTATTGGCCAACTAAGCACATTGGAGGAGCTCCGGCTGGACAACAACAACATGTCTGGTGAGCTGCCATCAGCCGTAGGTAACTGCACAAATCTGAGGTACCTCAGCCTCAGAAACAACAAATTTGTGGGAGATCTTAGCAAAGTCAATTTTACCCGGTTGAATTTGAGAATCGCAGATTTCTCAATTAATAACTTCACTGGTACAGTTCCAGAAAGCATATACTCATGCAGCAATCTAATTGCGTTGCGGCTGGCTTTCAACAAGTTTCATGGCCAGCTCTCACCAAGAATGGGCAATCTGAAGTCCATGTCCTTCTTTTCAATAGCCGATAACCATCTCACAAATATCACAAATGCACTTCAGATACTCAAGAGCTGCAAAAACCTTACCGCCGTTCTTATTGGAACCAACTTCAAGGGTGAAACCATATCAAAAAGTGAAACAATTGATGGTTTTGAGAATCTTCGGGTACTGACTATAGATTCCTGTGGATTGGTTGGACAAATTCCCACTTGGATATCAAAGCTCAAAAAACTGGAGGTGTTGGATTTATCAAACAATATGCTCTCTGGAAAAATACCATTTTGGATTAGTGATCTGCCTGTTCTTTTCTATTTAGATATAACAAACAACAGTCTTACAGGGGATATCCCAACTGCGTTGATGAACACGCCGATGCTACAATTAGGAAAGAATGCTGCCCAGTTGGACCCAAATTTCCTTGAATTGCCTGTTTATTGGACACGATCACGTCAATACCGCTTGCTCAACGCTTTTCCTAATGCGTTGAATCTAGGTAACAATGGTTTCACAGGAGTGATTCCCCCAGAGATTGGTCGGTTGAAAATGCTCGACGGCTTCAATATCAGCTTTAACAGGTTATCTGGAGAAATACCACAGCAGATATGCAATCTCACAAACCTGCAATTGCTAGATTTATCAAGCAATCAGCTCACAGGTGAACTACCGTCTGCACTGACTGATATGCACTTCCTTTCTAAATTCAATGTTTCTAACAATGAACTAGAAGGGCCAGTTCCAACTGGAGGACAGTTTGATACATTTCTTAATTCTAGCTATAGTGGGAATTCGAAGCTATGTGGTGCTGTACTCAGTAACCTTTGCAGTCCCACTACAAGAAAAGAAAACTTCACCTCACAGCGGCGCAACTTACGGTGTGCATTAGTCACTGGAATCACCTTGGGAGCACTCGTCGCTCTTGCTTTGCTTGCATGCTTCTTGATTGGGCGGTTGGAACCAGATGAGGAGCTTTTGCTAGGCTTTGCATTTGGGCCAACTCTGAACAATGAAGGAATGGGTGAAATGAGTAATGTACAGTGA</cdnaseq>

Protein Sequence

<aaseq>MVAPCAASPTRENVSSDLPCGMTGERGDLLARLAGGRGVLFDGVTARVVARQHLPARRERSCTEQEESSLIGFLDGLLQGGNGSLCMSWVKRTDCCKWEGITCSSDGTVTDVLLAAKGLQGHISPLLGNLTGLLHLNLSHNLLNGNLPMELLFSRSIIVLDVSFNRLDGSLPELQSSSGGFPLQVLNISSNLFTGQFSSKLWEAMKNIVALNASNNSFTGQIPSSICINSPSLAILDLSYNQFSGSIPPELGNCSKLREFKAGYNNFNGALPEELFSATSLEHLSLPSNDLQGVLDGSDILKLVKLTVLDLGSTGLSGNIPDSIGQLSTLEELRLDNNNMSGELPSAVGNCTNLRYLSLRNNKFVGDLSKVNFTRLNLRIADFSINNFTGTVPESIYSCSNLIALRLAFNKFHGQLSPRMGNLKSMSFFSIADNHLTNITNALQILKSCKNLTAVLIGTNFKGETISKSETIDGFENLRVLTIDSCGLVGQIPTWISKLKKLEVLDLSNNMLSGKIPFWISDLPVLFYLDITNNSLTGDIPTALMNTPMLQLGKNAAQLDPNFLELPVYWTRSRQYRLLNAFPNALNLGNNGFTGVIPPEIGRLKMLDGFNISFNRLSGEIPQQICNLTNLQLLDLSSNQLTGELPSALTDMHFLSKFNVSNNELEGPVPTGGQFDTFLNSSYSGNSKLCGAVLSNLCSPTTRKENFTSQRRNLRCALVTGITLGALVALALLACFLIGRLEPDEELLLGFAFGPTLNNEGMGEMSNVQ</aaseq>

Gene Sequence

<dnaseqindica>1..179#1034..3077#3342..3428#ATGGTGGCGCCGTGCGCGGCCTCGCCGACGAGGGAAAATGTCTCCAGTGACCTCCCGTGCGGCATGACCGGCGAGCGCGGCGACCTCCTCGCCCGCCTCGCCGGCGGGCGCGGTGTCCTCTTCGACGGCGTGACCGCGCGAGTAGTAGCGCGGCAGCATCTCCCGGCGCGGCGTGAACGGTTAGCCGCTTCTCCATCTGAACTTGGGTAACATTTGCCTGGATTTTTTTTTTCGACTTCGAAATCTACCTATAATGTTATTCAGGAAAATCCTGAAATAATCACTTTACGTATACTAAGGCTGTAAGGCATAGCGATTATCAGTTTAGCACACTAATCGCAGAATAGGGGAATATGTCGTACATTGTCGCTGTGGATAAATTTATAACCGTGGAGATCCACTGTTACAGGCTTACGGACAGAAAGCTCATAACTATACTGTATATAGTTATATAAAACATATAATTCCACTTCAAATAAAATTAAATATAGTGCCCACAATTACATGGAAAATTTAGCTTATCGCATTAAAAAAACACATTTTTTCTCTTTACAAATAGATCAAACCTTCATGCAAACAAGTAGTATAAAAGAACATAAGGCTCACTGACTCGCTGTGTTGAAAACTGTACGCTTTCTGGCATCATGAACTGAGACTGTATGAAAAAAATAATCTGTTGACTGCGTCCATTTGTTTGGTATGCAAAAATTCTACTTTAAGCCAACTATTTTTCACTAATCAGTACCGCTACCAATTCAGCTCAAATAAAAAATTCTGCAGCTACTCTTCATTTTACATTTTATCCGTTTGGGTGAAGCTGAAGGCCCACATACCCTCGTGCTCATGGCTTCAGCACTACAACTCTCAGGCATCTTTTATCATGGTGTTTGGATCAATACAGTTTGATATATGGTTTCAATTTTTCTTTCTGACAAGATACATCGTTTCAATTTTCAGGCAAGATCCACAAATCAGCCGCGCTGTTCTTTGGCCTTGCTGTTGTTGTTCTGCTCTCCTTTACCTCTCCGACCAGCTCCTGCACGGAGCAGGAGGAGAGCTCCCTCATCGGCTTCCTAGATGGTCTCTTGCAAGGTGGCAATGGCAGCCTCTGCATGTCATGGGTGAAGAGGACAGACTGCTGTAAATGGGAAGGCATCACCTGCAGCAGTGATGGCACAGTCACAGATGTCTTGCTGGCTGCTAAGGGCCTCCAAGGGCACATCTCGCCATTGCTCGGCAATCTTACTGGGCTGTTGCACCTCAACCTGTCTCACAACTTACTCAATGGCAACCTACCGATGGAATTGTTGTTCTCCAGAAGCATCATCGTCCTTGACGTTAGCTTCAACCGCCTAGATGGTTCTCTGCCAGAGTTGCAGTCCTCTAGTGGTGGTTTTCCTCTCCAGGTACTGAATATCTCAAGCAATTTATTTACAGGGCAGTTCTCATCCAAACTGTGGGAGGCGATGAAGAATATTGTTGCTCTTAATGCAAGCAACAACAGCTTTACAGGACAGATACCATCTTCTATCTGCATCAACTCCCCATCACTTGCTATCCTTGACCTTTCTTACAACCAATTCAGTGGCAGTATTCCTCCGGAGCTTGGAAATTGCTCCAAGCTGAGAGAGTTCAAGGCTGGCTACAACAATTTTAATGGAGCTCTCCCTGAAGAACTCTTCAGTGCTACCTCGTTGGAGCACTTGTCTCTTCCTAGCAATGATTTACAGGGAGTTCTTGATGGTTCTGACATATTAAAACTCGTCAAGCTGACTGTCCTTGATCTCGGATCGACTGGGCTCAGTGGGAACATCCCGGATTCTATTGGCCAACTAAGCACATTGGAGGAGCTCCGGCTGGACAACAACAACATGTCTGGTGAGCTGCCATCAGCCGTAGGTAACTGCACAAATCTGAGGTACCTCAGCCTCAGAAACAACAAATTTGTGGGAGATCTTAGCAAAGTCAATTTTACCCGGTTGAATTTGAGAATCGCAGATTTCTCAATTAATAACTTCACTGGTACAGTTCCAGAAAGCATATACTCATGCAGCAATCTAATTGCGTTGCGGCTGGCTTTCAACAAGTTTCATGGCCAGCTCTCACCAAGAATGGGCAATCTGAAGTCCATGTCCTTCTTTTCAATAGCCGATAACCATCTCACAAATATCACAAATGCACTTCAGATACTCAAGAGCTGCAAAAACCTTACCGCCGTTCTTATTGGAACCAACTTCAAGGGTGAAACCATATCAAAAAGTGAAACAATTGATGGTTTTGAGAATCTTCGGGTACTGACTATAGATTCCTGTGGATTGGTTGGACAAATTCCCACTTGGATATCAAAGCTCAAAAAACTGGAGGTGTTGGATTTATCAAACAATATGCTCTCTGGAAAAATACCATTTTGGATTAGTGATCTGCCTGTTCTTTTCTATTTAGATATAACAAACAACAGTCTTACAGGGGATATCCCAACTGCGTTGATGAACACGCCGATGCTACAATTAGGAAAGAATGCTGCCCAGTTGGACCCAAATTTCCTTGAATTGCCTGTTTATTGGACACGATCACGTCAATACCGCTTGCTCAACGCTTTTCCTAATGCGTTGAATCTAGGTAACAATGGTTTCACAGGAGTGATTCCCCCAGAGATTGGTCGGTTGAAAATGCTCGACGGCTTCAATATCAGCTTTAACAGGTTATCTGGAGAAATACCACAGCAGATATGCAATCTCACAAACCTGCAATTGCTAGATTTATCAAGCAATCAGCTCACAGGTGAACTACCGTCTGCACTGACTGATATGCACTTCCTTTCTAAATTCAATGTTTCTAACAATGAACTAGAAGGGCCAGTTCCAACTGGAGGACAGTTTGATACATTTCTTAATTCTAGCTATAGTGGGAATTCGAAGCTATGTGGTGCTGTACTCAGTAACCTTTGCAGTCCCACTACAAGAAAAGAAAACTTCACCTCACAGCGGCGCAACTTACGGTGTGCATTAGTCACTGGAATCACCTTGGGAGCACTCGTCGCTCTTGCTTTGCTTGCATGCTTCTTGATTGGGCGGTTGGTATATGATGATCACACCGAAAGCCTAACTCACCTTCAAATGCGGTACCGAAGATAGATGCTTAACAGACTCAGTTTTTTTTTAAATTTTTTTTATTTGATTCTGATGCCAGCATTTATGGTTTAATCACTTTTAAACTTCTTTGTATGGCTGCTCTTTTTTTTTTTTTTTTTTGTCTCTCGGATAGCCTGAAATAGCATGCTACTAAATGGTTGTGTGAATTTACTGAATCAACTGTATGAACCAAGTTGTAACCAATTTCAGGAACCAGATGAGGAGCTTTTGCTAGGCTTTGCATTTGGGCCAACTCTGAACAATGAAGGAATGGGTGAAATGAGTAATGTACAGTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA020626