BGIOSGA020627

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Revision as of 12:49, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA020627| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA020627, complete gene.| tag = P0532H0...")
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Gene Name

BGIOSGA020627

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA020627, complete gene.

LocusTag

P0532H03.32

Ensembl Transcript ID

BGIOSGA020627-TA

Ensembl Protein ID

BGIOSGA020627-PA

Length

3216

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:30850945..30854160

Sequence Coding Region

30851466..30854160,30850945..30851453

Genome Context

<gbrowseImage1> name=IndicaChromosome06:30850945..30854160 source=RiceIndica06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome06:30850945..30854160 source=RiceIndica06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGAGTAGCCGGGTCGTCGTCGTCTCGGGAGTTCTTGTGCTGGTTTTGGTCGTCGTCTCCGTTTGTGGCCGGGCAGCTGCGTGCGTTGAGGCGGAGAGGGAGGCGTTGCTGTCCTTCCTCGCCGCTGCCGCGCCGCCGGCAGGGGATGGCATCGCCGCCCAGTGGCGAGGGTCGCCGGACTGCTGCGCGTGGGACGGCGTGGGGTGCGGCGTCGACGGCGCGGTCACGCGTCTGCGGCTGCCGGGACGCGGGCTCGGCGGCACGATCTCGCCGTCGATCGCCAACCTCACCGCGCTCACGTATCTCAACCTGTCTGGCAACAGCCTCTCCGGCAGGTTCCCCGACCTGCTGTTCGCGCTGCCCAATGCTACGGTTGTCGACGTCAGCTACAACCGTCTCTCCGGCGAGCTACCTAACGCGCCGGTGGCGGCGGCGGCGGCGGCGACGAATGCCCGCGGCAGCCTCTCGCTTCAGGTGCTCGACGTGTCGAGCAACCTCTTGGCGGGGCGGTTCCCGTCCGCGATCTGGGAGCACACGCCGCGCCTCGTGTCGCTCAATGCCAGCAACAACAGCTTCCATGGCTCGATCCCGTCCTTGTGCGCGAGCTGCCCGGCGCTCGCCGTTCTCGACCTCTCCGTGAACGTGCTTAGTGGGGCCATCTCCCCCGGGTTCAGCAACTGCTCGTGGCTGCGCGTTCTCAGCGTGGGCCGCAACAACCTCACCGGCGAGCTCCCCGGCGACATCTTCGACGTGAAGCCGCTGCAGCGTCTGCAGCTACCGTCCAATCAGATAGAAGGCCGGCTTGATCCTGAGCGCATCGCCAAGCTGACCAATCTGATCACGCTTGATCTTACCTACAATATGTTCACCGGCGAATTGCCGGAGTCGATCAGCCAGCTCACGAAGCTGGAGGAGCTCCGGCTTGGCCATAACGACTTCACCGGAACTCTCCCACCGGCGTTGAGCAACTGGACCAGCCTCCGATGCCTCGACCTCCGGTCGAACAGCTTCGTCGGGGATCTCACGGTCGTTGACTTCTCCGGCCTCGCCAACCTCACCGTCTTCGACGTGGCCGCCAACAACTTCACCGGCACAATCCCGCCAAGCATCTACTCCTGCACGGCAATGAAGGCGCTGCGTGTCAGCAACAACCTCATGGTCGGCCAGATCTCGCCGGAGATCGGCAACCTGAAAGAGCTCCAGTTCTTCTCACTGACCGTGAACTCCTTCGTCAACATCAGCGGCATGTTCTGGAATCTCAAGGGCTGCACGAGCCTCACCGCGCTGCTCGTGTCCTACAACTTCTACGGCGAGGCGCTGCCGGACGCCGGCTGGGTCGGCGACCACGTCAGGAGCGTCCGGTTGATGGTGATGCAGAACTGCGCGCTGACCGGCGTGATCCCGTCGTGGCTGTCGAAGCTGCAGGATCTCAACGTCTTGGATCTCTCCGGCAACCGGCTCACCGGCCCGATCCCGAGCTGGCTCGGCGCCATGCCGAAGCTGTACTACGTCGACCTCTCCGGGAACCAGCTGTCCGGGGTGATACCGCCGTCGCTGATGGAGATGCGGCTGCTTACATCCGAGCAGGCCATGGCGGAATTCAACCCAGGCCATCTCCCGCTCATGTTCACCCTGACGCCGAACAACGGAGCCGCGAGCCGGCAGGGCCGCGGATACTTCCAGATGTCCGGCGTCGCCACGACGCTCAACTTCAGCGACAATGGCATCACCGGCGCGATCCCGCCGGAGATCGTGAAGCTAAAGACGCTGCAAGTGCTCGACGTCAGTTACAACAACCTCTCCGGCGGCATCCCGCCGGAGCTGAGCAGCCTCACCAGGTTGCAGATTGTGAACTTGCGCTGGAACCGCCTCACGGGGACGATTCCTCCGGCGCTCAAGGAGCTCAACTTCCTCGCCGTCTTCAACGTGGCGTACAACGACCTCGAGGGGCCGATCCCGACGGGCGGCCAGTTCGATGCGTTCCCGCCACGGGACTTCACGGGGAACCCGAAGCTCTGTGGCGAGGTGATCTCTGTTCCCTGCGGTGACAGATTCGACGCGACAGACACCACTTCGTCCAAGGTCGTCGGGAAGAAGGCCCTGGTCGCCATCGTTCTTGGTGTCTGCGTTGGCCTGGTTGCTCTCGTCGTCTTCCTCGGATGCGTTGTGATCGCCTTCAGAAGAGTGGTGTCCAATGGAGCCGTCCGTGATGGCGGGAAATGCGTGGAGTCGACCCTGTTCGACTCCATGTCTGAGATGTACGGAGACAGCTCCAAGGACACGCTCTTGTTCATGTCGGAGGCCGCTGGCGAGGCGGCGAGCGGAGTGACGTTCGTGGACATCCTTAAGGCGACGAACAACTTCAGCGCGGGAAACATCATTGGTTCGGGCGGGTACGGCCTGGTGTTCCTCGCCGAGCTGCAGGACGGCACCCGGCTCGCCGTGAAGAAGCTCAACGGTGACATGTGCCTGGTGGAGCGGGAGTTCCAGGCGGAGGTGGAGGCGCTGTCCGCGACGCGCCACGAGAACCTCGTCCCTCTCCTGGGCTTCTGCATCCGCGGGCGGCTGCGGCTGCTGATCTACCCGTACATGGCGAACGGCAGCCTCCACGACTGGCTGCACGAGCGGCGAGCCGGTGCCGGCCGCGGCGCGCCGCAGCGTCTGGACTGGCGCGCCAGGCTCCGCATCGCGCGCGGCGTGCTCTACATCCACGACCAGTGCAAGCCACAGATCGTGCACCGCGACATCAAGTCGAGCAACATCCTCCTCGACGAGGCCGGCGAGGCCCGCGTCGCCGACTTCGGGCTGGCGCGCCTCATCCTCCCCGACCGGACGCACGTCACGACGGAGTTGGTCGGCACGCTGGGGTACATCCCGCCGGAGTACGGCCAGGCGTGGGCGGCGACGCTGCGCGGCGACGTGTACAGCTTCGGCGTCGTGTTGCTGGAACTACTGACAGGGAGGCGGCCCGTCGAGGCTTTGCCGCACGGGCAGCAGCGGGAGCTCGTCCGGTGGGTGCTCCAGATGAGGTCTCAGGGGAGGCACGGCGAGGTGCTCGACCAGCGGCTGAGGGGCAAGGGCGACGAGGCACAGATGCTGTACGTGCTCGACCTCGCATGCCTCTGCGTCGACTCGACGCCGTTGAGCCGGCCGGCGATACAGGACATTGTTAGTTGGCTGGACAACGTCGAATTCATCGGCTGA</cdnaseq>

Protein Sequence

<aaseq>MSSRVVVVSGVLVLVLVVVSVCGRAAACVEAEREALLSFLAAAAPPAGDGIAAQWRGSPDCCAWDGVGCGVDGAVTRLRLPGRGLGGTISPSIANLTALTYLNLSGNSLSGRFPDLLFALPNATVVDVSYNRLSGELPNAPVAAAAAATNARGSLSLQVLDVSSNLLAGRFPSAIWEHTPRLVSLNASNNSFHGSIPSLCASCPALAVLDLSVNVLSGAISPGFSNCSWLRVLSVGRNNLTGELPGDIFDVKPLQRLQLPSNQIEGRLDPERIAKLTNLITLDLTYNMFTGELPESISQLTKLEELRLGHNDFTGTLPPALSNWTSLRCLDLRSNSFVGDLTVVDFSGLANLTVFDVAANNFTGTIPPSIYSCTAMKALRVSNNLMVGQISPEIGNLKELQFFSLTVNSFVNISGMFWNLKGCTSLTALLVSYNFYGEALPDAGWVGDHVRSVRLMVMQNCALTGVIPSWLSKLQDLNVLDLSGNRLTGPIPSWLGAMPKLYYVDLSGNQLSGVIPPSLMEMRLLTSEQAMAEFNPGHLPLMFTLTPNNGAASRQGRGYFQMSGVATTLNFSDNGITGAIPPEIVKLKTLQVLDVSYNNLSGGIPPELSSLTRLQIVNLRWNRLTGTIPPALKELNFLAVFNVAYNDLEGPIPTGGQFDAFPPRDFTGNPKLCGEVISVPCGDRFDATDTTSSKVVGKKALVAIVLGVCVGLVALVVFLGCVVIAFRRVVSNGAVRDGGKCVESTLFDSMSEMYGDSSKDTLLFMSEAAGEAASGVTFVDILKATNNFSAGNIIGSGGYGLVFLAELQDGTRLAVKKLNGDMCLVEREFQAEVEALSATRHENLVPLLGFCIRGRLRLLIYPYMANGSLHDWLHERRAGAGRGAPQRLDWRARLRIARGVLYIHDQCKPQIVHRDIKSSNILLDEAGEARVADFGLARLILPDRTHVTTELVGTLGYIPPEYGQAWAATLRGDVYSFGVVLLELLTGRRPVEALPHGQQRELVRWVLQMRSQGRHGEVLDQRLRGKGDEAQMLYVLDLACLCVDSTPLSRPAIQDIVSWLDNVEFIG</aaseq>

Gene Sequence

<dnaseqindica>1..2695#2708..3216#ATGAGTAGCCGGGTCGTCGTCGTCTCGGGAGTTCTTGTGCTGGTTTTGGTCGTCGTCTCCGTTTGTGGCCGGGCAGCTGCGTGCGTTGAGGCGGAGAGGGAGGCGTTGCTGTCCTTCCTCGCCGCTGCCGCGCCGCCGGCAGGGGATGGCATCGCCGCCCAGTGGCGAGGGTCGCCGGACTGCTGCGCGTGGGACGGCGTGGGGTGCGGCGTCGACGGCGCGGTCACGCGTCTGCGGCTGCCGGGACGCGGGCTCGGCGGCACGATCTCGCCGTCGATCGCCAACCTCACCGCGCTCACGTATCTCAACCTGTCTGGCAACAGCCTCTCCGGCAGGTTCCCCGACCTGCTGTTCGCGCTGCCCAATGCTACGGTTGTCGACGTCAGCTACAACCGTCTCTCCGGCGAGCTACCTAACGCGCCGGTGGCGGCGGCGGCGGCGGCGACGAATGCCCGCGGCAGCCTCTCGCTTCAGGTGCTCGACGTGTCGAGCAACCTCTTGGCGGGGCGGTTCCCGTCCGCGATCTGGGAGCACACGCCGCGCCTCGTGTCGCTCAATGCCAGCAACAACAGCTTCCATGGCTCGATCCCGTCCTTGTGCGCGAGCTGCCCGGCGCTCGCCGTTCTCGACCTCTCCGTGAACGTGCTTAGTGGGGCCATCTCCCCCGGGTTCAGCAACTGCTCGTGGCTGCGCGTTCTCAGCGTGGGCCGCAACAACCTCACCGGCGAGCTCCCCGGCGACATCTTCGACGTGAAGCCGCTGCAGCGTCTGCAGCTACCGTCCAATCAGATAGAAGGCCGGCTTGATCCTGAGCGCATCGCCAAGCTGACCAATCTGATCACGCTTGATCTTACCTACAATATGTTCACCGGCGAATTGCCGGAGTCGATCAGCCAGCTCACGAAGCTGGAGGAGCTCCGGCTTGGCCATAACGACTTCACCGGAACTCTCCCACCGGCGTTGAGCAACTGGACCAGCCTCCGATGCCTCGACCTCCGGTCGAACAGCTTCGTCGGGGATCTCACGGTCGTTGACTTCTCCGGCCTCGCCAACCTCACCGTCTTCGACGTGGCCGCCAACAACTTCACCGGCACAATCCCGCCAAGCATCTACTCCTGCACGGCAATGAAGGCGCTGCGTGTCAGCAACAACCTCATGGTCGGCCAGATCTCGCCGGAGATCGGCAACCTGAAAGAGCTCCAGTTCTTCTCACTGACCGTGAACTCCTTCGTCAACATCAGCGGCATGTTCTGGAATCTCAAGGGCTGCACGAGCCTCACCGCGCTGCTCGTGTCCTACAACTTCTACGGCGAGGCGCTGCCGGACGCCGGCTGGGTCGGCGACCACGTCAGGAGCGTCCGGTTGATGGTGATGCAGAACTGCGCGCTGACCGGCGTGATCCCGTCGTGGCTGTCGAAGCTGCAGGATCTCAACGTCTTGGATCTCTCCGGCAACCGGCTCACCGGCCCGATCCCGAGCTGGCTCGGCGCCATGCCGAAGCTGTACTACGTCGACCTCTCCGGGAACCAGCTGTCCGGGGTGATACCGCCGTCGCTGATGGAGATGCGGCTGCTTACATCCGAGCAGGCCATGGCGGAATTCAACCCAGGCCATCTCCCGCTCATGTTCACCCTGACGCCGAACAACGGAGCCGCGAGCCGGCAGGGCCGCGGATACTTCCAGATGTCCGGCGTCGCCACGACGCTCAACTTCAGCGACAATGGCATCACCGGCGCGATCCCGCCGGAGATCGTGAAGCTAAAGACGCTGCAAGTGCTCGACGTCAGTTACAACAACCTCTCCGGCGGCATCCCGCCGGAGCTGAGCAGCCTCACCAGGTTGCAGATTGTGAACTTGCGCTGGAACCGCCTCACGGGGACGATTCCTCCGGCGCTCAAGGAGCTCAACTTCCTCGCCGTCTTCAACGTGGCGTACAACGACCTCGAGGGGCCGATCCCGACGGGCGGCCAGTTCGATGCGTTCCCGCCACGGGACTTCACGGGGAACCCGAAGCTCTGTGGCGAGGTGATCTCTGTTCCCTGCGGTGACAGATTCGACGCGACAGACACCACTTCGTCCAAGGTCGTCGGGAAGAAGGCCCTGGTCGCCATCGTTCTTGGTGTCTGCGTTGGCCTGGTTGCTCTCGTCGTCTTCCTCGGATGCGTTGTGATCGCCTTCAGAAGAGTGGTGTCCAATGGAGCCGTCCGTGATGGCGGGAAATGCGTGGAGTCGACCCTGTTCGACTCCATGTCTGAGATGTACGGAGACAGCTCCAAGGACACGCTCTTGTTCATGTCGGAGGCCGCTGGCGAGGCGGCGAGCGGAGTGACGTTCGTGGACATCCTTAAGGCGACGAACAACTTCAGCGCGGGAAACATCATTGGTTCGGGCGGGTACGGCCTGGTGTTCCTCGCCGAGCTGCAGGACGGCACCCGGCTCGCCGTGAAGAAGCTCAACGGTGACATGTGCCTGGTGGAGCGGGAGTTCCAGGCGGAGGTGGAGGCGCTGTCCGCGACGCGCCACGAGAACCTCGTCCCTCTCCTGGGCTTCTGCATCCGCGGGCGGCTGCGGCTGCTGATCTACCCGTACATGGCGAACGGCAGCCTCCACGACTGGCTGCACGAGCGGCGAGCCGGTGCCGGCCGCGGCGCGCCGCAGCGTCTGGACTGGCGCGCCAGGCTCCGCATCGCGCGCGGCGCCAGCCGCGGCGTGCTCTACATCCACGACCAGTGCAAGCCACAGATCGTGCACCGCGACATCAAGTCGAGCAACATCCTCCTCGACGAGGCCGGCGAGGCCCGCGTCGCCGACTTCGGGCTGGCGCGCCTCATCCTCCCCGACCGGACGCACGTCACGACGGAGTTGGTCGGCACGCTGGGGTACATCCCGCCGGAGTACGGCCAGGCGTGGGCGGCGACGCTGCGCGGCGACGTGTACAGCTTCGGCGTCGTGTTGCTGGAACTACTGACAGGGAGGCGGCCCGTCGAGGCTTTGCCGCACGGGCAGCAGCGGGAGCTCGTCCGGTGGGTGCTCCAGATGAGGTCTCAGGGGAGGCACGGCGAGGTGCTCGACCAGCGGCTGAGGGGCAAGGGCGACGAGGCACAGATGCTGTACGTGCTCGACCTCGCATGCCTCTGCGTCGACTCGACGCCGTTGAGCCGGCCGGCGATACAGGACATTGTTAGTTGGCTGGACAACGTCGAATTCATCGGCTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA020627