BGIOSGA020633

From RiceWiki
Revision as of 12:49, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA020633| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA020633, complete gene.| tag = OsI_242...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA020633

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA020633, complete gene.

LocusTag

OsI_24268

Ensembl Transcript ID

BGIOSGA020633-TA

Ensembl Protein ID

BGIOSGA020633-PA

Length

5205

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:30774079..30779283

Sequence Coding Region

30778750..30779283,30776901..30777026,30774079..30774945

Genome Context

<gbrowseImage1> name=IndicaChromosome06:30774079..30779283 source=RiceIndica06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome06:30774079..30779283 source=RiceIndica06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGAGCACGGTGGCCACGAGCTCGCCGTCGTCGTCCTCGTCTTGCTGCTTCTCGTGTCCGCCACCTCGTGCACGTTCCTGGAGGAGGACGTGATTCTTGGCACGGTGGAGGAGGCGAAGGTGGCGAGGCTGGGTGGTGGCGGCGGTGGCGGCAGCAAGGGCGCGAACGCGAGCACGAGGAGAGCGGACAACACCTGCGCCGGCATCGGCGTCGGCGGCGGCGGCGGCGGTGGCGGTGGCGGTGGAGGGGGTGGGAGAGGGAGGTTTTACTTGGGGTGGAAGGAGGAGATTGCCGGGATGGCGGGGCGGCCGGAGACGGCGGCGTGGCTGCGCGCGGTGCGGCGGCGGATCCACGAGCGGCCGGAGCTGGCGTACGAGGAGGTGGAGACGAGCCGGCTGGTGCGCGACGAGCTGGACGCCATGGGCGTCGGGTTCCGCCACCCGGTCGCCCGCACCGGCGTCGTCGCCAACATCGGCACCGGCCGGCCGCCGGTGGTCGCGCTCCGGGCCGACATGGACGCGCTGCCCATCCAGGAAGCAGTGGAATGGGAGCACAAGAGCAAGAACCCAGGGAAGATGCACGCCTGCGGCCACGACGCGCATGTGGCGATGCTCCTCGGCGCCGCCAAGATACTCAAGGCTCGCGAGCACCATCTCAGGGGTACAGTGAGACTACTGTTCCAGCCAGCCGAGGAGTCGGGCGCTGGCGCCAAGCGGATGATCGAAGGCGGCGCGCTGGAGGACGTGGAGGCGATCTTCGCCGTCCACGTGTCGCACCAGCATCCGACGTCCGTGATCGGTTCCAGGACCGGCCCTCTGCTCGCCGGCTGCGGCTTCTTCAAGGCCGTCATCCACGGCGGCCGCCGCTCCGGCGACGCCGTCCTCGCCGCCGCATCCACCATCATCAGCCTGCAGAGCATCGTGTCCCGCGAGGCGGATCCCCTCGACTCGCAGGTGGTGTCTGTGGCCATGGTGAACGGCAGCGATCACCCGGCGGCGACGGCGCGGGCGGCGGCGGCGGAGGAGGAGGAGGAGTTCGTGCTGGGCGGCACGTTCCGGGCGTTCTCGAACGCGAGCTTCTACCAGGTGCGGCGGCGGATCGAGGAGGTGATCACGGCGCAGGCGAGGGTGCACGGGTGCGAGGCGGCGGTGGACTTCTTCGAGAACCAGAGCTTCTACCCGCCGACGGTGAACGACGCGCGGATGTACGCGCACGTGAAGGCGGTCGCCGGCGAGCTCCTCGGCGCCGGGAGCTACCGCGACGTGCCGCCGATGATGGGCGCCGAGGACTTCTCCTTCTACTCCCAGGTCGTCCCCGCCGGGTTCTACTACATCGGCGTGCGCAACGAGACGCTCGGCTCCGTCCACACCGGCCACTCCCCCTACTTCATGATCGACGAGGACGTCCTCCCCACCGGCGCCGCCTTCCACGCCGCCATCGCCGAGCGCTACCTCGCCAACCACTCGCCTTCCTCCTCCTCCTCCTCCGACTCCGACGACCCGGACGTCGAGCTGGAGGCGTCGTGA</cdnaseq>

Protein Sequence

<aaseq>MEHGGHELAVVVLVLLLLVSATSCTFLEEDVILGTVEEAKVARLGGGGGGGSKGANASTRRADNTCAGIGVGGGGGGGGGGGGGGRGRFYLGWKEEIAGMAGRPETAAWLRAVRRRIHERPELAYEEVETSRLVRDELDAMGVGFRHPVARTGVVANIGTGRPPVVALRADMDALPIQEAVEWEHKSKNPGKMHACGHDAHVAMLLGAAKILKAREHHLRGTVRLLFQPAEESGAGAKRMIEGGALEDVEAIFAVHVSHQHPTSVIGSRTGPLLAGCGFFKAVIHGGRRSGDAVLAAASTIISLQSIVSREADPLDSQVVSVAMVNGSDHPAATARAAAAEEEEEFVLGGTFRAFSNASFYQVRRRIEEVITAQARVHGCEAAVDFFENQSFYPPTVNDARMYAHVKAVAGELLGAGSYRDVPPMMGAEDFSFYSQVVPAGFYYIGVRNETLGSVHTGHSPYFMIDEDVLPTGAAFHAAIAERYLANHSPSSSSSSDSDDPDVELEAS</aaseq>

Gene Sequence

<dnaseqindica>1..534#2258..2383#4339..5205#ATGGAGCACGGTGGCCACGAGCTCGCCGTCGTCGTCCTCGTCTTGCTGCTTCTCGTGTCCGCCACCTCGTGCACGTTCCTGGAGGAGGACGTGATTCTTGGCACGGTGGAGGAGGCGAAGGTGGCGAGGCTGGGTGGTGGCGGCGGTGGCGGCAGCAAGGGCGCGAACGCGAGCACGAGGAGAGCGGACAACACCTGCGCCGGCATCGGCGTCGGCGGCGGCGGCGGCGGTGGCGGTGGCGGTGGAGGGGGTGGGAGAGGGAGGTTTTACTTGGGGTGGAAGGAGGAGATTGCCGGGATGGCGGGGCGGCCGGAGACGGCGGCGTGGCTGCGCGCGGTGCGGCGGCGGATCCACGAGCGGCCGGAGCTGGCGTACGAGGAGGTGGAGACGAGCCGGCTGGTGCGCGACGAGCTGGACGCCATGGGCGTCGGGTTCCGCCACCCGGTCGCCCGCACCGGCGTCGTCGCCAACATCGGCACCGGCCGGCCGCCGGTGGTCGCGCTCCGGGCCGACATGGACGCGCTGCCCATCCAGGTACGCGCGAATCGCGACGCCGACTCCTTTTGCACGCGGTGCACGTGCCATCCATCACTACTCACCGGCATACTTGCTGCTACTAATATCCAGCTCCTTTATAATTCGTTCTTTAATTTTCGCCTCGAAATTATTTGGGTGGATTAATTAGGATTACTACTCTGTAAACCAGTAATGACAAAGAAACTATAGTTACAAATGAGAGGTTTGCTTTTCTAAGCCTTTCATCTCATTTGGCGCGAATTCGTTACGACAAGTGTAAAATGCAGCAGTGTTAGCATGACTATTTGCTGACCAAAAACATTTTTATTTTTTTTGCGTCTTTGTTTTTGTTTATAAAAGACCTTTTTGGGGTTGATCCAGACTGTGTGTGTGCATGTGGGAATTGGAGTAGTGACTATACCTGGAGGTACACAGTACACTCTGCTAGGCACACGGATGTACCCTTTCTTGTGAAAAATGTGAGATTCTCTGGTCTCTTATACTTGGTTAGTGACTGACAAGTGGGGCTCACTTTTTGCTGGTCATTAAGCCTTCAATATTTTTAACAAAAACTGAAAAAAAAAGGAATCTGATGGCAAATTAGGAATGCATTTCCGATGCACTCCCGGAAATGCTTTCACGACCACCGATAAAAACAGTGACAGTACTAAAACTTTACTCTGAAGGAGTATTTTCTGAACTTTCTATAGAGATTGACAGCAACAAAGCAGAACCCCAAAATCAAAAGCTGAAATTTTTGTCACTGTCTGTTTTCTGAATGAGACAAATGAGTTAGAAGCATATCGTTAGGCATATCACGGTGATTAGGGTGTGCCAGATTGTATTGCTGTAGTTCAACAGAGGCTCTGAAAGGCAGGTAAAAGAAAAGGAGAGGACGCAGTTGATCGGCTGGAACACGTCGCTGGGTCACTTCGTCTTTGGTTCTTCTCACCTGTGAGGGCCCGTTTAGTTCCCCAAAAAATTTTCCCAAAAATATCACATCGAATCTTTGGACACATGCATGAAGCATTAAATATAGATAAAAAGAAAAACTAATTGCACAGTTATGGAGGAAATCGCGAGACGAATCTTTTAAGCTTAATTAGTCCGTGATTAGCCATAAGTGCTACAGTAACCCAAATGTGCTAATGACGGCTTAATAGTCTCAAAAGATTCGTCTCGCGGTTTCCAGGCAAGTTTTGAAATTAGTTTTTTCATTCGTGTCCGAAAACCCCTTCCGATATCCGATCAAACGTTTGATATGACACTCAAAAATTTACTTTTCTCCAACTAAACACACCGTCAGTTTGTGACAAGATCGCAAGAATCGATTCTCCCACGAGCAGCAGAAAGAAGGATCGCTGCATTTCATCGCCATCTCGATCTGCTTCACCCCTTGCTGTTTGGACTGTCATCACGGAATCTTCAGAGTTCAGAGATCGAGCGTTGCATCACGCCATCACTGTTCACCGATGTGAAAAAACAGGAGCAAAACTTTCGTATGCACGTTCCTTCAGAAGGAAAAAAAATCTCATGGAATCATCGATTCATTCCCCAAATGGCCAGAAAAGTCGTGCTTCGTGAGTGCCCAGAAACGGGCCATTTTTAGGACTAAAGCGAACCTTTCGTTGTCTGTTGATGCATGCGTGTTTGGCCGTTTTGGCACCCCGTTTTGATAAATTCATCGTGCAATTTTGATAAAATCTGACGCCTTTTTTTTCATTTTTCCTTTTCTGTTCAGGAAGCAGTGGAATGGGAGCACAAGAGCAAGAACCCAGGGAAGATGCACGCCTGCGGCCACGACGCGCATGTGGCGATGCTCCTCGGCGCCGCCAAGATACTCAAGGCTCGCGAGCACCATCTCAGGGTACGTCTACTGACTAGATTCTTCTCTGAATACTTTAAAAATGGTTCTTCTTTGTCTGAATCTCTGAATTTTTCAGTGTGTCTCGTGATCTCGTCTCGTCTCGTGCGTATATAGTTGTAGTAGTAGTTTCTTCTCTAAATTCTTTAAAAATGGTTGTTTGTCTGAATTTCTCAATGTGTCTAGTCTCGTGCATGTACACCATAGTTGTAGCTTCTGTCGGTTTGTGCGTAGCTCTTGCCGTGCAAGCGATGGTTTGTACTACCATGAGAGAGCTAGCTGCCCGCCCCTAGATTTGCATCATGGAAAAGGTGCAAATGCTTAAATTGTTATCATAAGACGCGCGTAATGTGTTAAAAGTCCAGGTATGATGTCGCCGCGTCATGGTTTGGTGTCAGCATCAGGTGTCATCCGAGGACAGCTTTAGGAAGGAAACCATTTGCATTACCCAAAACAAACTTTGCTTCGTGTTTTCAGCATGCACTGATTGTACTAAGTATAGCTGGCATCAGTGGAATGATTATTCTCTTGATTGTTTTTCTGATGTGATAAGAGATATTGGCGCAACATTCCTTCAGTTTAGTGGTGAGTAGTACTAGATTCTTCCTGCTTAGTTCTTGGCTTTTTTAGTTTTCTCTCTGAAACTTGAGAGCACATGCTTAGTGGAGAGTGGAGATTGAGAAGCTCCTTTTCTGCTTGCTTTAGTACTATACCAGTACTAGGTAGGCGTATTTGGTTGAGGATAAATATTGAGGTGATAAGGGGATCAATTCTTGCTCAATGGAAGTAAGTTAGACAGATGTCTATCTAGGCCCTCAAGTTCTAATTCAGTAGAAATGTCCCAATCTACTCTTTTGCTTCCTAATAGAATGTTAAAACCACCAGGTCAGTTTCTTTAAACTTAAACGTACTCGTTACTCCCTCCGTCAATAAATATTGCTTCTAATATATAAGAATAATTAACCATTTGCCACTCTTAGGCTCTGTTCGTTTCCTGGAGTTCCCAACTCCCCCATCTCATTTTCCGCGCGCATGCTTTTCAAACTGCTAAACGGTGTGTTTTTTGCAAAAAGTTTATATACGAAAGTTGTTTAAAAAAATTATATTGATCCATTTTTTAAAAAAATAGCAAATAATTAATTAATCACGTGCTAATGGACTGCTTCGTTTTCCGTACCGGAGGGATGGGTTCCCAACTCAACCAAAAGAACAGAGCCTTACAAGTGGTGATAAATGATTTGCCACTGAATCCACATGTCATAAACAACTAGTGGCAAATTTTTAATTGTGGCAAAAAAAATAAATGTATCTAATACGGAGTATATGGTAAGCATTTCTTTGGAGTTTTAGCAGAGATTAAGGTGTTGAGATGAAATTTCTTTGATGCCCCTAGGATTTCAACTTATATAGTACGATAATAGGACAGCCGGTACGTGTTGTCATGTCGATGTGAAACTGTGTCCCAACGTTCATCAAGAATGACCCTACGCCAACTACTCTGTCGGATGTGTGGCGACAAAACTCAGCATTTTTAAGGAATTTTGGTACAAGGAAAGTGCTATGGAATGTGAGCTGGATTTCTGTTCTGGCTTCACAGAACAATTCACTTTGCATCGAGAAATTCCTTTTTGGTACTACAAGAGGGAAGTGCTCTGGAGTGTGGGCTGGATTTCAGTTCGGAGTTCAGACTTCATAGAACAATTCACATTTGCATTAAGAAAGTTTTTGTACGAGGGAAGTTCTATGCCGCGTGAATTGGATTTTAATTCAGACTTCATAAAACAATTCTGACCATATCATTCTTACTGCAACTAATTACTTAAATTTTGACCGCACCTATTAATCTCTTTGCCAATACTGATCTTACCATTCCTAAAACAGGAAGAAACTGTGTTTATTTGGAAGCTACTGCAAGTAATTAACTGAAGTGACCATGGTTTGAATTTTCATGTGTGCAGGGTACAGTGAGACTACTGTTCCAGCCAGCCGAGGAGTCGGGCGCTGGCGCCAAGCGGATGATCGAAGGCGGCGCGCTGGAGGACGTGGAGGCGATCTTCGCCGTCCACGTGTCGCACCAGCATCCGACGTCCGTGATCGGTTCCAGGACCGGCCCTCTGCTCGCCGGCTGCGGCTTCTTCAAGGCCGTCATCCACGGCGGCCGCCGCTCCGGCGACGCCGTCCTCGCCGCCGCATCCACCATCATCAGCCTGCAGAGCATCGTGTCCCGCGAGGCGGATCCCCTCGACTCGCAGGTGGTGTCTGTGGCCATGGTGAACGGCAGCGATCACCCGGCGGCGACGGCGCGGGCGGCGGCGGCGGAGGAGGAGGAGGAGTTCGTGCTGGGCGGCACGTTCCGGGCGTTCTCGAACGCGAGCTTCTACCAGGTGCGGCGGCGGATCGAGGAGGTGATCACGGCGCAGGCGAGGGTGCACGGGTGCGAGGCGGCGGTGGACTTCTTCGAGAACCAGAGCTTCTACCCGCCGACGGTGAACGACGCGCGGATGTACGCGCACGTGAAGGCGGTCGCCGGCGAGCTCCTCGGCGCCGGGAGCTACCGCGACGTGCCGCCGATGATGGGCGCCGAGGACTTCTCCTTCTACTCCCAGGTCGTCCCCGCCGGGTTCTACTACATCGGCGTGCGCAACGAGACGCTCGGCTCCGTCCACACCGGCCACTCCCCCTACTTCATGATCGACGAGGACGTCCTCCCCACCGGCGCCGCCTTCCACGCCGCCATCGCCGAGCGCTACCTCGCCAACCACTCGCCTTCCTCCTCCTCCTCCTCCGACTCCGACGACCCGGACGTCGAGCTGGAGGCGTCGTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA020633