BGIOSGA020640

From RiceWiki
Revision as of 12:49, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA020640| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA020640, complete gene.| tag = OS06G06...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA020640

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA020640, complete gene.

LocusTag

OS06G0690200

Ensembl Transcript ID

BGIOSGA020640-TA

Ensembl Protein ID

BGIOSGA020640-PA

Length

3679

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:30651204..30654882

Sequence Coding Region

30654508..30654882,30654004..30654056,30653598..30653683,30652839..30653026,30652545..30652662
,30651886..30652009,30651647..30651800,30651204..30651548

Genome Context

<gbrowseImage1> name=IndicaChromosome06:30651204..30654882 source=RiceIndica06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome06:30651204..30654882 source=RiceIndica06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGAGAGCAGCAGCCTGTGGGGCGTGCTTGGGCAGGCGTCGAACGTGGCGCAGCTGGTCGGCGTCGACGCGCTCGGGCTGGTCTCCATGGTGGTGCAGGCGGCACTGGCGGCGCGCTGCCACCGGGACGCGTGCCGGCGGCTGGGGCAGCACGTGGAGCTCGTCGGCGGCCTGCTGCGGGAGCTGGAGCTCGCCGAGCTGATGCGGCGGGAGGCCACCAGGCGGGCCCTCGAGCAGCTCCAGCCTCCAGGGCGCGCTGCGGCGGTGCTACGCGCTCGTCACGGCGTGCCAGGAGGACCGCGGCTACCTCCACCGCCTGCTCCTCGGCGCCCGGATGGCCAACGAGCTCCGCGCCGCGCAGCACGAGATCGACATGCAACCGAGGGGGTGCGTGCCGTAGTCCCAAGCTGTTCAGACCATCACACAAGGTTTCAAAGAAGAGCATTGGAGTTCATTGAATTACATGTTCAAGGAGCGGCCAAACCTAGTGAAATTGGGGGAAAATCATTAGTAGTAACAGTGGACCCGCAACCGCAAGAAGAAAAAATAATGGATATTGAGGCAGTACTGAAACTTTTTGTCCATACTGAAGAGAACTACCCAGGATTTAGGAAGTTCGATTTCATTCAGATTGTGGATGCTACAGATGGTTTTTCCGAGAAGAGAATACTTGGAAAGGGTGGATTTGGTACTGTTTACAAGCTTGTAAGGATTCAGCATACCAATCTAATTAGGTTATTGGGGTGGTGCATCCATGAAAAAGAAAGGATCCTTGTATATGAGTACATTCAGAAAGGCAGTTTGCACAATATTATCTTCCACTTGAAACCAAGTAACATCCTCTTAGACCATGACATGAACCCAAAGATTGGTGATTTTGGATCGGCGGTAACACTGGTTTCAGATGTAGCAGAAGAGCGTACAAAGAGAGTCGTGGGAACCAGTGGTTACATAGCTCCAGAGTATGCATCTCAAGGCCTTTATTCACTTAAGACAGATGTATTTAGCTTCGGTGTCGTGGTTCTAGAAACTATTAGTGGACGAAAGAATTTCATAATGGAGAAACAAAGGGATATTGTTGGCTATCTCGTTCGAGATGCATGGCATATGTGGAAAGACGGAAGGTTGCAAGAGCTCGTTGATCCAGCACTGTGTGATGGATATGAAAGCACCGTGATAATGCGATGCACGCAGGTGGCGCTTCTTTGTGCTCAGGAAGATCCAGCCGATCGGCCCACCATGACAGATGTTACTGCAATGCTTGACTCTGAAAGCATAATGCTATCAGATCCAAAGGAGCCAACTGAGCTTACTCATGGAGGTGCCAGTCCTGACAGGTCATCGACATATATTGGTCACTCAAGCAAGGCGATAGACATAACCATCACAAGTTCAGCTCCGGTTTCAACCAGAGTTCGCATCATTGTTGAACCAGAGATTTGA</cdnaseq>

Protein Sequence

<aaseq>MESSSLWGVLGQASNVAQLVGVDALGLVSMVVQAALAARCHRDACRRLGQHVELVGGLLRELELAELMRREATRRALEQLQPPGRAAAVLRARHGVPGGPRLPPPPAPRRPDGQRAPRRAARDRHATEGVRAVVPSCSDHHTRFQRRALEFIELHVQGAAKPSEIGGKSLVVTVDPQPQEEKIMDIEAVLKLFVHTEENYPGFRKFDFIQIVDATDGFSEKRILGKGGFGTVYKLVRIQHTNLIRLLGWCIHEKERILVYEYIQKGSLHNIIFHLKPSNILLDHDMNPKIGDFGSAVTLVSDVAEERTKRVVGTSGYIAPEYASQGLYSLKTDVFSFGVVVLETISGRKNFIMEKQRDIVGYLVRDAWHMWKDGRLQELVDPALCDGYESTVIMRCTQVALLCAQEDPADRPTMTDVTAMLDSESIMLSDPKEPTELTHGGASPDRSSTYIGHSSKAIDITITSSAPVSTRVRIIVEPEI</aaseq>

Gene Sequence

<dnaseqindica>1..375#827..879#1200..1285#1857..2044#2221..2338#2874..2997#3083..3236#3335..3679#ATGGAGAGCAGCAGCCTGTGGGGCGTGCTTGGGCAGGCGTCGAACGTGGCGCAGCTGGTCGGCGTCGACGCGCTCGGGCTGGTCTCCATGGTGGTGCAGGCGGCACTGGCGGCGCGCTGCCACCGGGACGCGTGCCGGCGGCTGGGGCAGCACGTGGAGCTCGTCGGCGGCCTGCTGCGGGAGCTGGAGCTCGCCGAGCTGATGCGGCGGGAGGCCACCAGGCGGGCCCTCGAGCAGCTCCAGCCTCCAGGGCGCGCTGCGGCGGTGCTACGCGCTCGTCACGGCGTGCCAGGAGGACCGCGGCTACCTCCACCGCCTGCTCCTCGGCGCCCGGATGGCCAACGAGCTCCGCGCCGCGCAGCACGAGATCGACATGTACATCCGCCTCATCCCTCTCATCGCTCTCGTCGATAACAGCAGCAGCAATCGTCGTGTCACAGTAAGCCTGTTTCAACTTTTGCTAGTAATTAGATAATTTCGTTGGTTCGTCTTAAAACTGAAGATTATGGCGTATGGTCGTACGGAGATGAATGAGAAATTGCAGATTCTTTTATGATGATTCATCTGATCGAAGTGATTTGTTCAAAGTGATTCTGTCAATGTTTCTGTTGTGCATTTGTACCTGAATTGGGGACTTGGGGATACCGGGGTACATACTACATACCGATTTTGACTTTCATACAAACAACTTTACATGGAGTAATTAATAGTTCTGCATTCATATGATTTTCCTTACTTGTCCACTGTTAGTTCCAAAAGTCCACTTTATATGCAGGCAAATTGCCTGTGAATGATATCTGTAGTTTTCACTGTTCTTGTCTAGCAGGCAACCGAGGGGGTGCGTGCCGTAGTCCCAAGCTGTTCAGACCATCACACAAGGTTAGGTGTATATACTGTTTCAGTACATAATTGATTGCTCAAAAAATGTTTCTTTATATGCTAAATCAAGGACCTGATGTCCTTATCGCGTCTTGACAAAATGGTGATATTGATGAGGAAACACCACTTATATTGGGTTATTTTAAACACCAGAGAATTATTGAAGATATCTGGTTGATTACTAATTGATCATAATTGTAACGATATCAAATTTATCTATGTTAATAGTTCAGCTGTTGTGAATATACCAGTTTTTAGGGCGAAATCAGGACCTTTGTTTTATGGTTTTGACATTAACGGGTATATTTGCCCAATTTTAGGTTTCAAAGAAGAGCATTGGAGTTCATTGAATTACATGTTCAAGGAGCGGCCAAACCTAGTGAAATTGGGGGAAAATCATTAGTAGGTAACTACATCTACAAATTTCCTACATTTGTTAATAATGATTTAAAAAGGCACACTTTAATAAATGGACTTACAAGCAAGAATATAAGAGTCAAAACAAATGTAATAGCGCACACTTAGAAATTTGTTCAAACAGAGAAAATCCCTATTTCATTTTAGTCAGACATTATAGCTTATGATCATGACCAAGTATTGGGTATTTGGATCTTATTATAACATTGCAATGTTTTTTGAAAGGATATAACATTGCAATGTGGTTAAAGACTTAAAGATGATTAAGTACTCGTAACACGATACCAGCTAATGTGCAACATCAGCTTCAGCTGATAAAAATTTTGCAAAACTTCAGCGAGAAGAAGCAAGCAAATGCTGAAGTTATCAACATTTTCACATTGATAGATACTTATGCACGATGAATATCATTTTTTCTCATTATTCTACGTCTATTCTTGTTAAGTTTTTCGAAAAGGAGTTTGATAACACAAGTTTTATATCTTTTGCTCAGTATGAAGTCATTAGTTATTGTATGAAGAAGCTGAGCATTTCTCATTTTAGTGTTAACCCTCATTCAGTAACAGTGGACCCGCAACCGCAAGAAGAAAAAATAATGGATATTGAGGCAGTACTGAAACTTTTTGTCCATACTGAAGAGAACTACCCAGGATTTAGGAAGTTCGATTTCATTCAGATTGTGGATGCTACAGATGGTTTTTCCGAGAAGAGAATACTTGGAAAGGGTGGATTTGGTACTGTTTACAAGGTGATAAACACATATATACTCCTTGTCTACACAAAATATATTCTATCATCAGAGAATGCCGCATAAACTCTAGCTATTGGTAACTCCATTGCAGACACTTGCTTGATGGACTTACAGTTGCCATAAAGACATTTGATGCTGATACAGCAATATTTGATTTGAAAAGTGAATTGCAGCTTGTAAGGATTCAGCATACCAATCTAATTAGGTTATTGGGGTGGTGCATCCATGAAAAAGAAAGGATCCTTGTATATGAGTACATTCAGAAAGGCAGTTTGCACAATATTATCTTCCGTAAGTTGCACACAAGACCTTTATTTTATTTTTTGCAATCAGACCTAATACAGTTTCTAATAAATATGCTTGCGAATGTAAAACAACTCTTACCAAAGGGGAGTTGGATATCACTTGAATGTTGCTATGCTTCTGATAACAACTGATTAGAAACTATGTTAATTTGATGTAGAACAGCATGTAACAATTACTTCCTCCGTTTCACAATGTAAGTCATTCTAACATTTTCCACATTCATATTGACATATGTGCTAGATTCATTAACATCAATATGAATGTGGAAAATGCTAGAATGACTTACATTGTGAAACATGTTTAGATTCATTAACATCAATATGAATGTGGGAAATGCTAGAATGACTTACATTGTGAAACGGAGGGAGTACTATTTTCTCTCAAGTGTATGTATTGTGCAAACATTCCACAGATAAAACGAAGGGGGCATTGCTAAATTGGTCCAAGCGATTTCAGATAATTAAAGGGCTAGCTGAGGGGCTTCTTTACCTGCACAAGCACTGTTGGATTGTACATAGAGACTTGAAACCAAGTAACATCCTCTTAGACCATGACATGAACCCAAAGATTGGTGATTTTGGATCGGCGGTAACACTGGTTTCAGATGTAGCAGAAGAGCGTACAAAGAGAGTCGTGGGAACCAGGTACGGAGCTGAACAAAATATAACGAATGGTGCACTGTTACATATATGTTCCAGTTTTCTCATGCCTTGTGATATCTATTTCCAGTGGTTACATAGCTCCAGAGTATGCATCTCAAGGCCTTTATTCACTTAAGACAGATGTATTTAGCTTCGGTGTCGTGGTTCTAGAAACTATTAGTGGACGAAAGAATTTCATAATGGAGAAACAAAGGGATATTGTTGGCTATCTCGTTCGAGATGTGAGTGAAGATACAGTTCAATGATACACTTTTTCTTATGGTCTTCTTCTAGCATACAGATTTGTGTTACACACTTGACAGATTGCAACATGTTTCAGGCATGGCATATGTGGAAAGACGGAAGGTTGCAAGAGCTCGTTGATCCAGCACTGTGTGATGGATATGAAAGCACCGTGATAATGCGATGCACGCAGGTGGCGCTTCTTTGTGCTCAGGAAGATCCAGCCGATCGGCCCACCATGACAGATGTTACTGCAATGCTTGACTCTGAAAGCATAATGCTATCAGATCCAAAGGAGCCAACTGAGCTTACTCATGGAGGTGCCAGTCCTGACAGGTCATCGACATATATTGGTCACTCAAGCAAGGCGATAGACATAACCATCACAAGTTCAGCTCCGGTTTCAACCAGAGTTCGCATCATTGTTGAACCAGAGATTTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA020640