BGIOSGA020658

From RiceWiki
Revision as of 12:49, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA020658| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA020658, complete gene.| tag = OsI_242...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA020658

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA020658, complete gene.

LocusTag

OsI_24212

Ensembl Transcript ID

BGIOSGA020658-TA

Ensembl Protein ID

BGIOSGA020658-PA

Length

2830

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:30375421..30378250

Sequence Coding Region

30377069..30378250,30376630..30376974,30375421..30375795

Genome Context

<gbrowseImage1> name=IndicaChromosome06:30375421..30378250 source=RiceIndica06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome06:30375421..30378250 source=RiceIndica06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCTTCCACCGTGCAGGTGCAGCTCCTCGTCACGCCCATCCTCTGCGTGTCACGGCGGTGCCTCGCGTCGTCGGACACCATCTCGGCCAGCTCCGCCGTCTCCGGCGGCCGGACCGTCGTGTCGAGAGGCGGCAGCTTCCAGCTCGGTTTCTTCCGCATCAACGCGTCGTCGTCGTCGTCGTCGTCACGAAACGGCAGCTGCTACTACGTGGGGATATGGTACAAGAAGGCCGTGTCGCCATGCACGCCGGTCTGGATCGCGAACAGAGCGGCGCCGGTCGCCGACCGGGCCACGTCGCGGCTCGCCATTGCGGCCGACGGCAACCTCGTGCTCATCAACGAAGCCGACGAGCTAGTGTGGTCCACGAACGTCAGCTCCGCCGCCGCCGCCGCCGCCGGAGCCGGCTCGAACGGCACGGTCGCCGTCATCTTGGACACCGGAAACCTCGTGCTCCGGCGAAAGAACGACGTCGACGAGGTCGTGCTGTGGCAGAGCATGGATCACCCTACAGACACGTGGCTCCCCGGAGCCCGGCTCGGGCTGAACAAGGTCACCGGCGAGGCGCAGGTGCTGACGACCTGGAAGAACTCCGGCGACCCGGCCCCCGGCGTGTTCTCGCTCGGGATCGACCCGGCCGGGACCAGCCAGTACTTCATCGTGTGGAACAGGACGGTGCCGTACTGGGCCAGCGGCGAGTGGAACGGCGACATCTTCGCCGGAATCCCGGAGATGACGTCACACTACATGTACAACTTCGAGTTCGTGTCCGACGCCAATGGCAGCTACTTCACCTACTCGCTGCAGGACCCGGCGATCATCTCCAGGCTCGTCGTCGGCGTCTCCGGCCAGGTCACGCAGCTCACGTGGGCGCCGTCCGCCGACGAGTGGATCCTCATCTGGACGGAGCCGCACCGCCTGTGCGACGTCCACGCCGTCTGCGGCGCGTTCGCCGTCTGCGACGAGAAGAGCGAGCCGCTCTGCAGCTGCCTCGCCGGCTTCCGCGCCGCCTCGCCGGGAGACTGGGACCTAGGAGACTACACGAAGGGTTGTCGCCGGAACACTCCATTGCAGTGTGCGAGCACGAGCATGGTGACCGGCGACAAGGACGAAGACGACTTCTTGCTCATCGCCGCCGAAGAATCCATCGTTTGTACGGGCATCCGGCGATCGAGACTGCAGACCGACGAGGCGGCCGGCGCGGCCAACCTCTACCTCCGGTTGTCCGCCATGGGCGTGCCATCGAAAAGCAGCAAGAAGACGATCGCTCTGGCTTGCGCCGGCGCCGCAGCTGCGTTGATCCTAGCTCTCTTCGTCGCCATGGCGTTCGTGCTGGTTCGGATGCTCAGGAGGAGGCGGAGCATGAGATTCGCGCAAGCATTGGAACGTGGCAACCTGGTGGCGTTCAGGTACAGCGACGTGAGGAGGGCGACCAAGAACTTCTCGGAGAATCTCGGCGGCGGCAGCTTCGGGTCGGTGTACAAGGGGAAGCTGCCCGGCGCCGGCGGTGCCGACGCCGCCGTCACGGCCGACGTGTACAGCTTCGGGATGGTGCTGCTCGAGATCGTCTCCGGCAGGAGGAACGCGCGGTGCTCGTCGGCGTCGGAGTACTTCCCGCTGGTGGCGGCGAGGAAGGTGCTCGACGGGGAGGTGGCCGGGTTGCTGGACGAGCGGCTGGACGGCGAGGCGGACATGGAGGAGCTCGACCGGGCGTGCAGGGTGGCTTGCTGGTGCGTCCAGGACGAGGAGGCGAACCGGCCGACGATGGAGCAGGTGGTGCAGGCGCTGGAGGGCGTCATCGCCGTCGACGTGCCGCCGGTTCCGGTGTCGCTGAAGGTTTTTGCCGACGACGCGTCGTCGTACTTCTCCGACGAGTGCTCCCAGCTGAAAAGCTCTTCTTGA</cdnaseq>

Protein Sequence

<aaseq>MASTVQVQLLVTPILCVSRRCLASSDTISASSAVSGGRTVVSRGGSFQLGFFRINASSSSSSSRNGSCYYVGIWYKKAVSPCTPVWIANRAAPVADRATSRLAIAADGNLVLINEADELVWSTNVSSAAAAAAGAGSNGTVAVILDTGNLVLRRKNDVDEVVLWQSMDHPTDTWLPGARLGLNKVTGEAQVLTTWKNSGDPAPGVFSLGIDPAGTSQYFIVWNRTVPYWASGEWNGDIFAGIPEMTSHYMYNFEFVSDANGSYFTYSLQDPAIISRLVVGVSGQVTQLTWAPSADEWILIWTEPHRLCDVHAVCGAFAVCDEKSEPLCSCLAGFRAASPGDWDLGDYTKGCRRNTPLQCASTSMVTGDKDEDDFLLIAAEESIVCTGIRRSRLQTDEAAGAANLYLRLSAMGVPSKSSKKTIALACAGAAAALILALFVAMAFVLVRMLRRRRSMRFAQALERGNLVAFRYSDVRRATKNFSENLGGGSFGSVYKGKLPGAGGADAAVTADVYSFGMVLLEIVSGRRNARCSSASEYFPLVAARKVLDGEVAGLLDERLDGEADMEELDRACRVACWCVQDEEANRPTMEQVVQALEGVIAVDVPPVPVSLKVFADDASSYFSDECSQLKSSS</aaseq>

Gene Sequence

<dnaseqindica>1..1182#1277..1621#2456..2830#ATGGCTTCCACCGTGCAGGTGCAGCTCCTCGTCACGCCCATCCTCTGCGTGTCACGGCGGTGCCTCGCGTCGTCGGACACCATCTCGGCCAGCTCCGCCGTCTCCGGCGGCCGGACCGTCGTGTCGAGAGGCGGCAGCTTCCAGCTCGGTTTCTTCCGCATCAACGCGTCGTCGTCGTCGTCGTCGTCACGAAACGGCAGCTGCTACTACGTGGGGATATGGTACAAGAAGGCCGTGTCGCCATGCACGCCGGTCTGGATCGCGAACAGAGCGGCGCCGGTCGCCGACCGGGCCACGTCGCGGCTCGCCATTGCGGCCGACGGCAACCTCGTGCTCATCAACGAAGCCGACGAGCTAGTGTGGTCCACGAACGTCAGCTCCGCCGCCGCCGCCGCCGCCGGAGCCGGCTCGAACGGCACGGTCGCCGTCATCTTGGACACCGGAAACCTCGTGCTCCGGCGAAAGAACGACGTCGACGAGGTCGTGCTGTGGCAGAGCATGGATCACCCTACAGACACGTGGCTCCCCGGAGCCCGGCTCGGGCTGAACAAGGTCACCGGCGAGGCGCAGGTGCTGACGACCTGGAAGAACTCCGGCGACCCGGCCCCCGGCGTGTTCTCGCTCGGGATCGACCCGGCCGGGACCAGCCAGTACTTCATCGTGTGGAACAGGACGGTGCCGTACTGGGCCAGCGGCGAGTGGAACGGCGACATCTTCGCCGGAATCCCGGAGATGACGTCACACTACATGTACAACTTCGAGTTCGTGTCCGACGCCAATGGCAGCTACTTCACCTACTCGCTGCAGGACCCGGCGATCATCTCCAGGCTCGTCGTCGGCGTCTCCGGCCAGGTCACGCAGCTCACGTGGGCGCCGTCCGCCGACGAGTGGATCCTCATCTGGACGGAGCCGCACCGCCTGTGCGACGTCCACGCCGTCTGCGGCGCGTTCGCCGTCTGCGACGAGAAGAGCGAGCCGCTCTGCAGCTGCCTCGCCGGCTTCCGCGCCGCCTCGCCGGGAGACTGGGACCTAGGAGACTACACGAAGGGTTGTCGCCGGAACACTCCATTGCAGTGTGCGAGCACGAGCATGGTGACCGGCGACAAGGACGAAGACGACTTCTTGCTCATCGCCGCCGAAGAATCCATCGTTTGTACGGGCATCCGGCGATCGAGACTGCAGGTCGGCTTGCTTGATGGATTGCAGCTGCAACGCCTACTCTTACGGCGATCGCTGCGCCCTGTGGCACGGCGATCTCCTCAACTTGCAACGGCAGACCGACGAGGCGGCCGGCGCGGCCAACCTCTACCTCCGGTTGTCCGCCATGGGCGTGCCATCGAAAAGCAGCAAGAAGACGATCGCTCTGGCTTGCGCCGGCGCCGCAGCTGCGTTGATCCTAGCTCTCTTCGTCGCCATGGCGTTCGTGCTGGTTCGGATGCTCAGGAGGAGGCGGAGCATGAGATTCGCGCAAGCATTGGAACGTGGCAACCTGGTGGCGTTCAGGTACAGCGACGTGAGGAGGGCGACCAAGAACTTCTCGGAGAATCTCGGCGGCGGCAGCTTCGGGTCGGTGTACAAGGGGAAGCTGCCCGGCGCCGGCGGTGCCGACGCCGCCGTCACGGTGAAGAAGCTCGAAGGGCTCCGCAGCGACATGGGCCGACAGGAAACTATTTTAACAACTCGAGTGGATGTCCATCCGTTTATTGCATGTCATCTAAATGATTATAAAAAATTTTTAAAAATATGAATAAAATTGATCAATATATAATGTATCAATCCACAAACATGCAAGTTAAAATTCAACTTCTACATATTGTAACAAAAATAACAAACAAAACTCAAATTACTACATGTATATTTACAATTAAATTTATTATTTTTGTTACAACTTGTAGAAGTTGAATTTTAACTTGTATGTTTGTGGAGTGATATATTACATATTGATCTATCTTGTCAATTTTTTAAAAAAAGTTTTATAGCCATTTAGTTGACATGCAATAAACGAGTGGACGTCCCCTCGAGCTATTAGAATCCATCCCCATGGGCGACAAGCAGTTCAGGAACGAGGTGCGCACCATCGGCACGATCCACTACGTCAACCTCGTCCGCCTCCGCGGCTTCTGCTCCGGCCGCGGCGGCGAGCGGCTGCTCGTCTACGACTACATGCCCAACGGCTCGCTGGACAAGGCCCTCTTCGGAAAATCCGCCGCCGCCGCCGTGCTGAGCTGGGGCGCGAGGTACCAGATCGCGGTCGGCGCGGCGAGGGGGTTGCTGTACCTGCACCAAGGCTGCCGCGACTGCATCATCCACTGCGACATCAAGCCGGAGAACATCCTGCTCGACGGCGCGCTGGTGGCGAAGGTCGCCGACTTCGGCCTCGCCAAGCTGGTGGGGAGGGACTTCAGCAGGGTACCTCGCGCCGGAGTGGATCTCCGGAGTGCCGGTCACCGCCAAGGCCGACGTGTACAGCTTCGGGATGGTGCTGCTCGAGATCGTCTCCGGCAGGAGGAACGCGCGGTGCTCGTCGGCGTCGGAGTACTTCCCGCTGGTGGCGGCGAGGAAGGTGCTCGACGGGGAGGTGGCCGGGTTGCTGGACGAGCGGCTGGACGGCGAGGCGGACATGGAGGAGCTCGACCGGGCGTGCAGGGTGGCTTGCTGGTGCGTCCAGGACGAGGAGGCGAACCGGCCGACGATGGAGCAGGTGGTGCAGGCGCTGGAGGGCGTCATCGCCGTCGACGTGCCGCCGGTTCCGGTGTCGCTGAAGGTTTTTGCCGACGACGCGTCGTCGTACTTCTCCGACGAGTGCTCCCAGCTGAAAAGCTCTTCTTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA020658