BGIOSGA020669

From RiceWiki
Revision as of 12:50, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA020669| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA020669, complete gene.| tag = P0547F0...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA020669

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA020669, complete gene.

LocusTag

P0547F09.8-1

Ensembl Transcript ID

BGIOSGA020669-TA

Ensembl Protein ID

BGIOSGA020669-PA

Length

6935

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:30226067..30233001

Sequence Coding Region

30232876..30233001,30232592..30232633,30232224..30232361,30231849..30231978,30231444..30231538
,30230335..30230450,30229077..30229109,30228604..30228742,30227248..30227327
,30226067..30226139

Genome Context

<gbrowseImage1> name=IndicaChromosome06:30226067..30233001 source=RiceIndica06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome06:30226067..30233001 source=RiceIndica06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGTGATTGTGTGTTCTTATCATCCAGTAACTCCTGGCCAATCTGCTGAGGAAATGCCAAGTATTGATGTTCCCAACAAAGAAAACAAGGACAAAGACATGTTTATCTTGCATGTGATCATACAGGTTAATCTCTGTAAAATTGCAAATGATAACATGTTTCAGAAGGTTAAACCTGGTGAATCAATTTCAGTTGCAGGCTGGAAAAGAATTGCTTCTGAGGTTGTGGCAACTATTCTTCAAGCACTGCATATGTCAGAAACTCCTCTGCATTTTGATTTCAACAGTGAGATTGAGGAACGTGAAATCGAATCCTTTGCAGAGCTTCCGGTTCTCTATGATGAACAGTTGTGCTTTGGGGACAATTGCAAGCATTGTGGAAGTCCGAAGAACGTTGATGTTTCTCCTTCAAACACACCACATATCTTTACAATAGGTTTATACTGGTTTGGTGATTGTGAAAACCAGGTTCAGCTATCTGAAGTTCTAGTTGGCATTGCACATCCCATTGATATCAAACTTCTCTGCAGGATCTCCTATGCCAATGGGCGGTACTTCTGCTTTGCTCGCGACCAGGATAAGTGGCTCATCTCTGATGCTGAGACTATTGAGGTAGATAACTTGCTCATGGCCTCTGCAGCAGCCATGTGGGCCCCATCTGTCATTGTAAGGTTGGACTGTGAGGAGGGAGGTGGTTGGAGGAGGATGAGCGAGGGGAGGCCGGTGCCGAGGAGGGAGAGCCCATGGGGCTTGCCGGAGGGGGACAAGCGGGAGCCCAAGGCGCACCGCTGCAACGACCGCGCCGAGGACGTCGTCCAGGCTTGCTTTGAGGGGAATCCTTTCAAGACAGTTCCAGGTCCATTCAAGCTCTTTTGGCAATGCATGCGTTCGAAACCTGGGGAGGAGCCAACGGAGCCGTATACTTACCTGCAGCTGGATCCTCCCAAGAGAGCGGAAGTCAAGCTAGAGTAA</cdnaseq>

Protein Sequence

<aaseq>MVIVCSYHPVTPGQSAEEMPSIDVPNKENKDKDMFILHVIIQVNLCKIANDNMFQKVKPGESISVAGWKRIASEVVATILQALHMSETPLHFDFNSEIEEREIESFAELPVLYDEQLCFGDNCKHCGSPKNVDVSPSNTPHIFTIGLYWFGDCENQVQLSEVLVGIAHPIDIKLLCRISYANGRYFCFARDQDKWLISDAETIEVDNLLMASAAAMWAPSVIVRLDCEEGGGWRRMSEGRPVPRRESPWGLPEGDKREPKAHRCNDRAEDVVQACFEGNPFKTVPGPFKLFWQCMRSKPGEEPTEPYTYLQLDPPKRAEVKLE</aaseq>

Gene Sequence

<dnaseqindica>1..126#369..410#641..778#1024..1153#1464..1558#2552..2667#3893..3925#4260..4398#5675..5754#6863..6935#ATGGTGATTGTGTGTTCTTATCATCCAGTAACTCCTGGCCAATCTGCTGAGGAAATGCCAAGTATTGATGTTCCCAACAAAGAAAACAAGGACAAAGACATGTTTATCTTGCATGTGATCATACAGGTAGTACAAAGTTGCATGCAGTATGTTTTGTCATGTGCTAACTTCTGAGTTCTGATTAACTATGAACATGCGCAGTCACTGTGGAATTTGAGGTGCTTCAGAGATGAGATTTTAAGGGCACCACCTGCAACAATCCTACATATCAAAGAAAACTTCTGCATCGCTGACCTATTCTATGGAATCTTCTTTGCTTGGGAGAATAATGACACAACGGAGTGGATGTTTTACTGACCTCTCTGAAGGTTAATCTCTGTAAAATTGCAAATGATAACATGTTTCAGAAGGTATGTGGGTTTCTTTGCATTGTCATTGTTCCACACTTCCATATGCACTGGAATGAACAAACTTAGATATACGAGTGCAATGTTCTTTAGTTGGCAAGCTCTGTTAATCAATTCGTTGCTGTTTTTCCTGATTAACATGTAAAGTGCCGAACTAATCGGTCGGAGGCTACCATGATCTTTATTCTGCTTCAGAACTTTATCCTTCATGTATATTTTTCTGCCTTCACAAGGTTAAACCTGGTGAATCAATTTCAGTTGCAGGCTGGAAAAGAATTGCTTCTGAGGTTGTGGCAACTATTCTTCAAGCACTGCATATGTCAGAAACTCCTCTGCATTTTGATTTCAACAGTGAGATTGAGGAACGTGAAGTAAGTCCTGTCAGCTGCGGAGATTGCATATGCCGAACACACGATCTGTTCGGGATTAAGTTCCATGTGCAAATGAGCTGCAGGTGTGGGAAGTGTTTTGGTGAGAAAGAACATACTACGATTTTCTGTAGACTTGATGCCAGTTCACCTCAAACAACAAAGGTGTGTCACATCAGATTTCCTGTGTAGCTAAAATTTTATATTATATGCAAGAGTAGCAAATAGTTATTGATAACTTTTTGCAGATCGAATCCTTTGCAGAGCTTCCGGTTCTCTATGATGAACAGTTGTGCTTTGGGGACAATTGCAAGCATTGTGGAAGTCCGAAGAACGTTGATGTTTCTCCTTCAAACACACCACATATCTTTACAATAGGTAAAGGTCCTTGTCTACAATAGTAAACTGCAATTTAATATTTGCTCTCTTTTTCCTGCCTAAACAGAATTACAGAACATGATATTGGTTGTTCCTAAAAAAACATGTTATTGGAGATATACATGACAACCACTTGTTGTAACTCAAACATATCCTGAAACTTTAAGGTTGACTTCTATTAAGTTTGATACGGTTTGTTATTATGCTGGTTAGGAAGGAGGCTTTTTGCTATGTTCTTTTATCCTTTTGGTTTCCTAAAGTTAACATCAAAATGTTTGTTTGGTGTTCCCTTTTTGCCATTATGCTGCAGGTTTATACTGGTTTGGTGATTGTGAAAACCAGGTTCAGCTATCTGAAGTTCTAGTTGGCATTGCACATCCCATTGATATCAAACTTCTCTGCAGGGTGTTCACTCCTCGGCAAAATATTCTCTGGCCTCAATGGTATGTGCAAAGAAAACCTTTGACTTTTTCATGAATTAAATTGTTGATATAACAGAAAAGTAATGTTATCCTTGATTGCCATGATAAGGAAATCCGAAAAGGAGGGGAAAACAATGAGCGATACGGTGTTGGTTGATATGCATTGTCCTGAGAGTTCTATGTGTCATTGTGTTCCTGGGTTGGTATTGTGTCTTAATATCACAAAATATATGGATTATACTCATGAGGTGAAAGAGGTCACAGGGACATTACATGTACTACTTGTCTTAAGAAAGAGATGGTGTTAGCATGACAAGAGGTTTTACTAGAATTAAAAGGACCAAGCTTATATTGGCCTTTACCAGATTGAAATCGGTTAGGCTACAGTGGATAATGGGTTCAAGCTATGATTCATAATATTCATATCTGAGTTGGTCGTATAGTATTTTGGGGAATATTTGCAAGTTACCAATGGTCCTGTCAGTGAAATTATTTGTCCTCAAACCATACTGATCTCGAAGACTGAAAGTTTCAAGACAAGTATTGGAGCAATAATTTGAGTACCTAGTCTGTGTAAGCAATACTGGTGAATAATAGAGAGGATCCTGAGTATCTCTGTGAACTTTTTATCACCATGTTTCATCGATTGAGCATTAAAATGAAGCACCATGGCCGGGTAATCTTTATTGGACTTCTTTTGATCTCTGTTACTCTCCAGTTGTCTTGATATATTTTTCATTTGCTTTATTCTAAAATATCACCACTAGAAATCTTATGCAGTGGTGCAAAACTTACATCAGACTACCCTTAAAATTTATTCCCTTGCTCTATTGAGTTTTACTTCAGTTTTTTTTTTCGCATGGTTTGTTCGATGCTCCTTAACCTGCCTGCTAACTTCAACATAACCGTGCCTAGCAAATATATTACCTTTTCATACGCCGAGGTTATTTATTCCATATTATCCAAAACTCTGCAGATCTCCTATGCCAATGGGCGGTACTTCTGCTTTGCTCGCGACCAGGATAAGTGGCTCATCTCTGATGCTGAGACTATTGAGGTAGATAACTTGCTCATGGCCTCTGCAGCAGCCATGTAGGCTTCTTGATTCTGATCTGCTCTCTGATTCTGAGCTGTTAATTGTGTACAGGCAGAAGATTCATGGGAGCAGTTGCTTGAACGCTTCAGAGACTGCAGGCTCCAACCTGAAGTTCTTTTTTTCGAGATCATCAATTAGATAGATGGACTGCCTGGAAGAACCCTGTCATAATATTGTATTCATAGCTTCAAGTTAATTTTGACATTTTTGCAAGCAACTTGCTTGTCATTATCTTGATGCTAACAGTTTTGATATATCTCCTTGTAAAACTACCATTTCTTACCAGTTTTGGAATGTTCTTGATCATTGAACAGCCTGTATTTGTTCCATTCCTTCTCTTTCCAGTTTCCAGTGGTGTCAAGGAAAGTTACCTCTTTGTGATTGAAAAAATAAAGAGGAAAAATATACTCTTTTTGGTTAAGCAGCAAGGCTGCAAATAACGAGCAAAAACAAACTTGTCAATTTGTTCCAGCTGCAGTAGCTGTGTGCATGCATGTTTATAATCTGTCAACATTGAGGGGTTCTTGATTATGGAACTTAATGAACTCAAATTTCAGTCAGAAAACATTCACAAAAAGGACATTTAAGAGTACGACTTGTTTCTTTCTGGTGCCAGATTATGACTGTTCCGGCTCGAGTTAATACTGATGACACAATTAACAGATTACAACCACTTGTTTTTTTCACCAATAGACTATGACACAATTAACTGTGCTACTTAAGATTTGCCAAATGCAGAGGATCAGTTCATGTCTAACTACAACTAGTTTTGTACTCCGTATTTTTGTTTGCACGTCTAATCAGTGTACACAATGCTAGATACCCAGAAAATATTTAGTAAATGAAGTTTTCTTCATTAAGGATTGCTTATATAACTAGTACTCCCTCCGTCCCAAAAAAAAACAAACTCTGGGTTTCCGTATCCAACGTTTGACCATTCGTCTTATTTAAAAAAATTATGAAAAAAATTAAAAAGACAAGTCACGCATAAAGTATTAATCATGTTTTATCATCTAACAACAATAAAAATACTAATTATTAAAAATTTTCATATAAGACGGACAGTAAAACGTTGGACACGAAAATCAGAGTTTGTCTTTTTTTTTTTTTAACGGAGGGAGTAGACTAGTAGCAGTTCTTTCATGTTGTTTGACAGAGTCTTGGGAGATGCTCGATTTAGCTCTGTTTGGCGCATGCTTAAACGCTCGCTCTTCGCTGCAGGTGGGCCCCATCTGTCATTGTAAGGTTGGACTGGTAATTCCAAGCCCAACTCGTTATGGGCCGAAAATGTTGGGCCTTATTGGGCATCTGAGGCGGCACCGAACAAAAAAAGTTGGGCCGGATTTTCTCCCCTCGGCCTCTTCGTCTACCCGTCGCTTCCGCTTGGACTCCGACCAGTGGAGGGCAACCAGCCGCCGCCGCCGGCCGCCGTCTCGTCTTGGGATCGCACGCGGCGCGGAAGAGGTAGGGTGGTTGCTAGGTGAGTCAGCCTCCTCCGATCTCTCCCTCGGACGCGTCGCGATGATCTGGGGTTTCATGGGAATGCCTCTTGCTTTGCGAATTTGAGCCATTTCGATCTTCTTTGCAGTGAGGAGGGAGGTGGTTGGAGGAGGATGAGCGAGGGGAGGCCGGTGCCGAGGAGGGAGAGCCCATGGGGCTTGCCGGAGGGGGACAAGCGGGAGCCCAAGGCGCACCGCTGCAACGACCGCGCCGAGGACGTCGTCCAGGTTCCACCCCCTCTCAACCCTAATCCAACCACAGCTCACGACCTGATTGATCTCTTATTATCTTCCTACCGATGAATGAGTGGTGATGAATGTGTAATGGAAATTGCGGAGCTCAGAGCTACCCGGATGATAGTTTTGTGGAGAACCTCTTGTCGCTATGCCTGTTTGCTAGTACTAAATTTGGATCTTGAAGGCGCTTGATAGTGAAATTGGCTGTAATTGCATCGTTAAACATAGTTGTTTTGGCATTACTAGCCTTTCTTACTTACAATTATTTCAGTGTTTACCTAACTGAATGTCTTCTCTTCGTGTTACATAACAAGATTGCATGATGTTCTCTGCCCACCAGCCACCATGATCCTGCATGTGCATTGCGCCATTGCTGCGATTGTTGTTGTTTTCAGGCTGCAGGTGGTATTTCCATGTTTGATCCCAAAACCATGTTTAGGAACGGCCTAGATGGCAATCAGATTCTTATGCTTACCCAGGATGAAATAAGCCTCAGTAATTAACCCAAAAACCAATGGCGGAGCTTCATCGAAATAGTGAGGGGGCCAAATGTCTGAACATTAGATCCTCAGTATTGATCAAGTACAGAAATAAACTCAAATTGGTTCATTTGCACTTATTGGCCATATTACTGGTCTATACTCCTAGGTGAATAAGAAAAGTGGGAACTAATAGGCAAATTATAACAACATACACTACTAGGTGAATAAGAAAAGTGGGAACTAATAGGCAAATTATAACAACATACACTGCTAGGTGAATAAGAAACCTCGGGGAGGCCATGAACCCATTTAATCACAAGTAGAAATGGACGAATTTTCAGTATGGAATTGCCCCTAATTTCAACTAGCATGCTGGTTCCACTCACACTGAACCTGCCAGGGTCCAAAATTTTCATCCTGTCTGGGATTTTCAGTAAAGAGTTTTCATCAGTTATCAGCGTCTGCTATGTAATGAATGTTTCCCAAGAATGCTGAAGAATTTTGCTCTGTGCCTCAATGTGTTGATTATATTATAGCAAATGATGATATTGTTAATTCTGAAATTCTTGGCCATCTTTATGTTGAACTCATCCTGTCTAGGATATTCAGTAAAGAGTTTTCATTGGTTATCTGCGTCTGCTACGTAATGAATGTTTCCCAAGAATGCTGAAGAATTTTGCTCTATGCCTCATTATGTTGATCATATTAGGGAAAATGATGCAATTGTTAATTCTGAAAATTTTGTCCATTTCTATGTTGAACTGGTTTTCTAATTTCTGTTGCAGGCTTGCTTTGAGGGGAATCCTTTCAAGACAGTTCCAGGTCCATTCAAGCTCTTTTGGCAATGCATGCGTTCGAAACCTGGGTATGTACAACTTCTTACAATTTGTATGTTTCATGCTTTTGTTCACACATATATTCCCAGTAATATGAGGCAACATACGTTTCAATAGGTCTAGCACATTAAGAACTAATATGATTGATAAAGGACATTGGAATCATCTGATTGAGGGGTTTTAAGGAGTGGTCACAGGATGCTCATGATAAGGTGGACCATTATATTGTGCCTATTGTTTGATATGTTCTTCTCTTTATGCTCCTTCTTGCCGGTGGCTCTTCCACCATAGGTCCTTCAGCAGCCTAAAGAAATATGTGCCATGTGAATATACCTAGTGGCTGCAGAAAATGCTCATGATGACTAATCTTTGCAGTGTAAAAGGCTCTAGTGTTGTGATTCCTTTCACCACATGGATTAGCATGAGCTTTGTTTTCTGACCAACTGAACTTGTAATCTCTGAGAGTTGTGTGAATTAGATTGTAAGGCAACTTTGTATTTGAGAAGTTATATAGGGCTATTCTCAATTAAATACAAATCCAATAAAATTTTATGTATGCTTCTTGGCCTGTTTTGCCATGTAGTTATTCGTTGCTTGGTTACATGTGTCATGTATCACCTTCTAGGATGGTGGTTTGGTTGCTTTCTTCACTTCCAATGGCGGGTAGGGTTTCTTTTCAAATGAAATTTGTTGTTGTCAAACCTGGGAAAGGGAAAGGAAAATATGGTCTATCTCAATTTGGCTGGTTCAGTTTGGTCAAGTTAGGAGCACTGACACTGTCTGGCTGGGAGCAACTGCTTCAAACAGGCTAATGCTAGAACCACTGAACTGACCAATAGCCACTCAAGTGAGAAAAAGAAGTATTGTTGCTAGTTGCTACCATACCTTGGGGTAGAAATCGAGGCAACCCTTTCGATAGACATTCTTTCCCCAAGAAGCTTCTGTACTTCAGAAAACTGTTGTAGACAAAACGCTATTTACTTGAGTCCACTAAAATGTGAAGCTGTGAGAAATGTTGTTATGACAAATGTACTTGTGTGTGACTAGTAGTAGTTAGATTGTAATGAGCATCGTAACCCTGAATATTTCTCTTACGTTTGTATCTGAAGTTTTCATGTAACAACCTGTTATTTACAGGGAGGAGCCAACGGAGCCGTATACTTACCTGCAGCTGGATCCTCCCAAGAGAGCGGAAGTCAAGCTAGAGTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA020669

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA020669&oldid=43194"