BGIOSGA020672

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Revision as of 12:50, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA020672| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA020672, complete gene.| tag = OS06G06...")
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Gene Name

BGIOSGA020672

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA020672, complete gene.

LocusTag

OS06G0679700

Ensembl Transcript ID

BGIOSGA020672-TA

Ensembl Protein ID

BGIOSGA020672-PA

Length

3606

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:30118105..30121710

Sequence Coding Region

30121605..30121710,30120393..30120520,30119585..30119754,30119410..30119487,30118627..30118771
,30118105..30118518

Genome Context

<gbrowseImage1> name=IndicaChromosome06:30118105..30121710 source=RiceIndica06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome06:30118105..30121710 source=RiceIndica06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGAGAAGGGGAAGTCGGTGGTCGCAGAGCTCGCAGCGTCGCTGAGAGATGTCGAGGTCACGCCGCGCCGGAAGCCAGCGAGTTCGTTACCGGCAGCTTCGTTCTATTCTCCAACAAACAAAGCTAGACCTCGGAAATTGGTTAGTTTGTGCCTTGGCATCCTCGGACAGCATCTTGAAGATATCATAACTGATATTTCCGAATTTTCTACCTTCTTTCCACCCCACATAAAGCTGGCAATTTTGTCCATTGCAAGAAGAAGAAGGCTTCTAAATGATGAAGTTTTGATCTCTCTTGCTGATAGTTCATGGGAGATCCTAGATATATCTGGCTCTGATGTATCTGATATTGGTCTGGCTACTGTGGCAAATATTTCTAATAATCTGTGGGCTATCGATATTAGTCGCTGTGAAAGAATAACTGCTGCAGCTGTTTCTGAGGTTATATGCCATTGCCCATCCTTGGAGATATTGAGATGCGGAGGCTGTCCAGGAAGTGAATCCACCGCGCGCAGATCTGTGTATCTCTTGAAACCCAAATTGAATACTCTTGAAGAGGACTCGTGGGAAGAACTTGATACGGTAGAAATTGGCGGGGGTGCAGAGTCCTTAAGATGGCTAGTTTGGCCAAAGATAGATGATAACTCAAAGGAAATTATATCTATGGAATGCCCTCGTATTACTGTCAACCCACAGCCATCACCTTTTGACCTTCGTGGACACAAGGTCCCAGCTGAAGCTCTGGCAAGTGTACCACTGGATCACTCCATAATCGCAGATATTGACCCCAAAACATGGGCTGTTGCTGCCGCCCCTCGAAGACCCACCGTTCCAACCAACCCAAATGCGCCCCCTGAAATACCAATCGCCGAGAAGTTCAGGCTAGCCTATGTGGAGAGAGAAGCAAGGCTGGCCCCAAAGAGAGCCAAGAGAGAACGACAGCAACGCCGTCGCGCCGAAAGGGAGTACCTGATGAACGACATCAATGCCAAATCTGTAGCGCTTGCAGCCCAAGTGAGCAAATACCTGCGCAAGAGCTAG</cdnaseq>

Protein Sequence

<aaseq>MEKGKSVVAELAASLRDVEVTPRRKPASSLPAASFYSPTNKARPRKLVSLCLGILGQHLEDIITDISEFSTFFPPHIKLAILSIARRRRLLNDEVLISLADSSWEILDISGSDVSDIGLATVANISNNLWAIDISRCERITAAAVSEVICHCPSLEILRCGGCPGSESTARRSVYLLKPKLNTLEEDSWEELDTVEIGGGAESLRWLVWPKIDDNSKEIISMECPRITVNPQPSPFDLRGHKVPAEALASVPLDHSIIADIDPKTWAVAAAPRRPTVPTNPNAPPEIPIAEKFRLAYVEREARLAPKRAKRERQQRRRAEREYLMNDINAKSVALAAQVSKYLRKS</aaseq>

Gene Sequence

<dnaseqindica>1..106#1191..1318#1957..2126#2224..2301#2940..3084#3193..3606#ATGGAGAAGGGGAAGTCGGTGGTCGCAGAGCTCGCAGCGTCGCTGAGAGATGTCGAGGTCACGCCGCGCCGGAAGCCAGCGAGTTCGTTACCGGCAGCTTCGTTCTGTAAGTCCCCTGGTTTCTTCTTCTTATTCATCCGTCAAGACCAAATGAAATTGCTCGAATCTGAAGCTGTATTGGATTTTATATTTACTTTGCTTTATTGGTTTAATTGTGTATTTATCATCGCCTGTGTTGGTTTCTAGCTTTAATTTGGTGCCCTAGAGTGATTGCTCACAGTTTACGTGATTGATTTGGCCACCGAAGTTCGTGTTCATGTTCTTGGTTGTGAACCAGTATATACTGTTAAGTTAAAATTCTAAGCTAATTGTTCGGTTTGGACAAGAAAGATATTGAGGGTTACTGGGTTAGGATTTTGTGCTTCAGTTTGATCACTCCATTGATGATATCCAAAAAGTTGCATACCACATCATGTTGTTCGAACACTAATCCGTTAAGAATTACAGGAAAACAAAAGTGTACAATCTCATTTGTAGTAATATGATTTACAGACACTGCAAATTATAAAGTACGGCAATAAACACACCAGTCTGAAATACTTAGTTATCTTCTTTTAATATGATCATCGAGATATGCAGATCCGAGCTTAAATTAGAAGTATAACATATACTGTCTTTTGTATATTCCAAATGTTGCAATATGAAAATTATGATATCCCCTGCGTCTATTGTAATACCTGAGCAATACAACCAAACTGGGACTCTTCTTTATAGCTTCTACAATCAGCCTAAAATATGTAACTGGATCTAGCAGGGTGCAAATCCTCAATTTTGAAAATTATGTCGGGCAAGTACAAGATTGTAGATGACAGTTGGTTTCTCTTGAACATAGAATGGAACCCCATATCCATTTATTTCGAGTGAGAATGAACTTGGACAAGCTATAATATTATTCTTCCTGACCAGGCTTCATTTGCTGCTGACAGTGGGCTCTATTCTTTTGAACGTTCCAAGAAGTTGTTGAACAGTGATACTCATCAGTTTTGCCCAACTTGCTTTATCCAGTTGTATGTGTGCGTATGTGCTGTGTACATTAGAATGATTGACTCATTTTTTTCCCTGACTGTCCTTGTCTGTGCCTTATGTGCTATTATACACACACACTAACCTGCACATTTGAACTGCATCAGATTCTCCAACAAACAAAGCTAGACCTCGGAAATTGGTTAGTTTGTGCCTTGGCATCCTCGGACAGCATCTTGAAGATATCATAACTGATATTTCCGAATTTTCTACCTTCTTTCCACCCCACATAAAGGTACATGTGTCTCGCCTTTGCAGGGTTTTGCTGTATTGCAATTTTATCTCATTCCCGTAATAAACTTTGTACTCAAGGGTTTCAATTGATGATATACCGTGCCAATATTTTGTTTATAATTGAAGACTGCTTTACTGTTGATGATAGAAAAATGTTATTATTGTAATTACTTTAGTTAATTGTTCAAACCGTTAATTTCTTCTGTTGATTATATAAAGTGCTCTGCCATCTCTGTGAGTTGTATGAGAGGCATTTAAGAAACACTGAGAATCTTTATTTTGCTTTTCTTTTCTTGTTGTTGAATCTTGATTTAAATAGCACAAAAGGCATACATCTAAACCTTAGGAACATTAAAAAGCCATGACTGCAAGACTTTGTATAACCAAAAGTCGTGTGGTAAGGAAACTACTGCTAGAGATATTTAGCTCTTCAGTTTTATGCCTGCTTGCATCAATAGCTAATAGGGAAAATCTTCTTATGGTACACATTATTGTGTTTTATCACATGTTTACCCAGTATGAGCATGCAAATTGACATTATATTTACTGCATAATGTGACATCATTTTTTATTTATATTTTAGTATCCATTGTTATACATGCATGTCACACTGATAGTTGAGCTTATTGTATGATACAGCTGGCAATTTTGTCCATTGCAAGAAGAAGAAGGCTTCTAAATGATGAAGTTTTGATCTCTCTTGCTGATAGTTCATGGGAGATCCTAGATATATCTGGCTCTGATGTATCTGATATTGGTCTGGCTACTGTGGCAAATATTTCTAATAATCTGTGGGCTATCGATATTAGGTAAGGCTTGCTATTATGCTACTAATTGCTTGGTGAAAGTTAAGTAACTATTCCTTTCGATGAATTCATCATGTTCATGATATATCTTCTCATGCAGTCGCTGTGAAAGAATAACTGCTGCAGCTGTTTCTGAGGTTATATGCCATTGCCCATCCTTGGAGATATTGAGATGCGGGTACGAGCTCCAACAAAATACATCTATAAGTCAATGGGTAGTATTAATTTACTTCTATCAGGCAATTTAATTTATTCTTTCCATGATTTTCCCTGTCATGTTTTTTGTGCATTAGTGTGAATTTCTTGGTGTTGATCTGGCTGTTCTGAATTTATGATCCATTCCTGTCGAAGTTTCAATTACATGGCTGAAGTCATTTTGTCCCATGAAAGTTCATGTGCTGAGTTGGTGGTCTTCGAGAAATTTGGATTCTGAAGTTAGCTATAAAATTTACACTTTATGATAACCCCATAATGATAATTGAAGTTGCTGAAAAATGACGTGTGTGGATGTTTTAAACTAGATTATGTGGTTCTTCATGGGTAAATAACAAAAAGTAACTTCATTTAATGATCGATCACTTTGGATGCCAATAATGCATGTACTCATATCACATATGCATGCAGGTGTCTTTCTGTACTGCGTATGAGTTCCCAGCCTAACTTATTTTACCGAATATCTAGTCGAAGCTTTCATAGAAAGTTGTTCTTTGCTCTGTAGTTTGTTCATGCTGGCAATTCTTATGGATTTCAATGTTGACTATGCAAAGTATTCCGCATAGCAGGATATGAAAACGAGCTTAAATCCCATGATTGCAGAGGCTGTCCAGGAAGTGAATCCACCGCGCGCAGATCTGTGTATCTCTTGAAACCCAAATTGAATACTCTTGAAGAGGACTCGTGGGAAGAACTTGATACGGTAGAAATTGGCGGGGGTGCAGAGTCCTTAAGATGGCTAGTTTGGGTATGCACGCAAACTCTTTTCCTTTTCTAAATGGATGTTATGATGTGTTGACTGCATTCAGATTTAATTGATGCATCTCTTGTGTTTCATATTTTTCTTGTTTTATAGCCAAAGATAGATGATAACTCAAAGGAAATTATATCTATGGAATGCCCTCGTATTACTGTCAACCCACAGCCATCACCTTTTGACCTTCGTGGACACAAGGTCCCAGCTGAAGCTCTGGCAAGTGTACCACTGGATCACTCCATAATCGCAGATATTGACCCCAAAACATGGGCTGTTGCTGCCGCCCCTCGAAGACCCACCGTTCCAACCAACCCAAATGCGCCCCCTGAAATACCAATCGCCGAGAAGTTCAGGCTAGCCTATGTGGAGAGAGAAGCAAGGCTGGCCCCAAAGAGAGCCAAGAGAGAACGACAGCAACGCCGTCGCGCCGAAAGGGAGTACCTGATGAACGACATCAATGCCAAATCTGTAGCGCTTGCAGCCCAAGTGAGCAAATACCTGCGCAAGAGCTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA020672