BGIOSGA020688

From RiceWiki
Revision as of 12:50, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA020688| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA020688, complete gene.| tag = OS06G06...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA020688

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA020688, complete gene.

LocusTag

OS06G0675700

Ensembl Transcript ID

BGIOSGA020688-TA

Ensembl Protein ID

BGIOSGA020688-PA

Length

5323

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:29868590..29873912

Sequence Coding Region

29873682..29873912,29872631..29872662,29870605..29871266,29870287..29870517,29869563..29870203
,29868590..29869486

Genome Context

<gbrowseImage1> name=IndicaChromosome06:29868590..29873912 source=RiceIndica06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome06:29868590..29873912 source=RiceIndica06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGATGGGCTCGCCGCCGGCGCCGCCGGCGCGTCGTCTTGGCGCTCTCGCCGTCTTCTTGCTCGCTCTCTTCCTCGCCGCGCCGTGGGGCGTCGACTGCGGGTACAACGTCGCGTCGGTGGCCGGGTCGAAGAACCGGCTGAGGGCGCGGCTGGAGCTCGCCGGCGGCGGCGGCGGCGCCGCGCCGGAGCTCGGCCCCGACGTGCGGCGGCTCAGCCTGACAGCGAGGCAACCAGTGAAACACACTAGATTAGCTATAACATGCCTGGAGACGGACAGCCGGCTACACGTCCGCATCACCGACGCCGACCACCCTCGATGGGAGGTGCCCCAGGACGTCATCCCGCGCCCCTCGCCGGACTCCTTCCTCGCCGCCACACGCCCAGGCGGCGGCCGCGTCCTCTCCACGGCGACCTCCGACCTCACCTTCGCCATCCACACCTGCCCGTTCCGCTTCACCGTCACCCGCCGCTCCACCGGCGACGTCCTCTTCGACACCACCCCAAACCTCGTCTTCAAGGATCGCTACCTCGAGCTCACCTCCTCGCTGCCGCCGCCCGGCCGCGCGTCGCTGTACGGCCTCGGCGAGCAGACCAAGCGCACGTTCCGGCTCCAGCGGAATGACACCTTCACGCTCTGGAACTCCGACATCGCCGCCGGCAACGTCGACCTCAACCTGTACGGCTCCCACCCCTTCTACATGGACGTGCGCTCCGGCGGCGGCGGCGGCGGCGGCGCGGCGCACGGCGTGCTCCTCCTTAACAGCAACGGCATGGACGTCATCTATGGCGGATCCTACGTCACCTACAAGGTGATCGGCGGCGTGCTGGATTTCTACTTCTTCGCCGGCCCGTCCCCTCTCGCCGTCGTCGACCAGTACACCCAGCTCATCGGCCGACCTGCCCCCATGCCGTACTGGTCATTCGGGTTCCACCAGTGCAGGTACGGGTACAAGAACGTGGCTGATCTTGAGGGCGTCGTCGCCGGCTACGCCAAGGCGAGGATCCCACTGGAGGTGATGTGGACGGACATCGATTACATGGACGCCTACAAGGACTTCACGCTTGATCCGGTGAACTTCCCGGCCGACCGGATGCGGCCGTTCGTCGACCGCCTCCACCGCAACGGCCAGAAGTTCGTCGTCATCATTGACCCAGGGATCAACGTGAACACGACGTACGGGACGTTCGTCCGGGCAATGAAGCAGGACATCTTCTTGAAGTGGAACGGGAGCAACTACCTCGGCGTGGTGTGGCCGGGGAACGTCTACTTCCCGGACTTCCTCAACCCGCGCGCCGCCGAGTTCTGGGCGCGCGAGATCGCCGCGTTCCGGCGGACCCTCCCCGTCGACGGGCTGTGGGTCGACATGAACGAGATCTCCAACTTCGTCGACCCGCCGCCGCTCAACGCGATCGACGACCCGCCGTACCGCATCAACAACTCCGGCGTGCGCCGCCCCATCAACAACAAGACGGTGCCGGCCTCCGCCGTGCACTACGGCGGCGTGGCCGAGTACGACGCGCACAACCTCTTCGGCTTCCTCGAGGCGCGGGCCACGCACGACGCGCTGCTCCGTGACACCGGCCGCCGGCCGTTCGTGCTCAGCCGCTCCACGTTCGTCGGCTCCGGCAGGTACACCGCGCACTGGACCGGCGACAACGCCGCGACGTGGGAGGACCTCCACTACTCCATCAACACCATGCTCAGCTTCGGCCTCTTCGGCATCCCCATGATCGGCGCCGACATCTGCGGCTTCGGCGGCAACACCACCGAGGAGCTCTGCAGCCGCTGGATTCAGCTTGGCGCGTTCTACCCGTTCTCGAGGGATCACTCGGCGATCGGCACCGTCCGGCGAGAGCTGTACCTGTGGGAGTCGGTGGCGAGGTCGGCGAGGAAGGCGCTCGGCCTGCGCTACCGGCTGCTCCCCTACTTGTACACGCTCATGTACGAGGCGCACACCACCGGCGCGCCCATCGCGCGGCCGCTCTTCTTCTCCTACCCCGGCGACGTCGAGACGTACGGCATCGACAGGCAGTTCCTGCTCGGGCGCGGCGTGCTCGTGTCGCCGGTGCTCGAGCCGGGCGCGACCACCGTCACCGCCTACTTCCCGGCCGGACGGTGGTTCAGCCTCTACGACTTCTCCCTCGCCGTCGCCACGAAGACCGGCAAGCGCGTGACGCTGCCCGCGCCGGTGGACACGGTGAACGTGCACGTCGCCGGCGGGAACATCCTGACGCTGCAGCAGCCCGCGCTGACGTCGTCGCGCGTGCGCCAGAGCGTGGTCCACCTCCTGGTCGCGCTCGCCGACGACGGCACGGCCACCGGGGATCTCTTCCTGGACGACGGCGAGTCGCCGGAGATGGCCGGGCCGCGGAGCAGGTGGAGCCAGATCAAATTCAGCGGCGCGACCGAGAGCGGCGGCGGCGTGGTCAGAGTGAGGTCGCATGTGGTGCACGACTCGTACGCGCCGAGCCGGACGATGGCCATCGGCAAGGTGGTGCTCATGGGGCTCCGGTCGCCGGCGCCGCCCAAGGGGTTCGCCGTTTATGCCAACGGCGTCCAGGTGAACGCGAGCACGGCGGTCGGCGGCGCCGCCGGGAGCCCGGAAAAGGGAGCGCTGGGCGTCGCGCACGTCAGCGGGCTGACGCTGGTCGTCGGGCAGGAGTTCGATCTCAAGGTCGTGATGACCTATTAA</cdnaseq>

Protein Sequence

<aaseq>MMGSPPAPPARRLGALAVFLLALFLAAPWGVDCGYNVASVAGSKNRLRARLELAGGGGGAAPELGPDVRRLSLTARQPVKHTRLAITCLETDSRLHVRITDADHPRWEVPQDVIPRPSPDSFLAATRPGGGRVLSTATSDLTFAIHTCPFRFTVTRRSTGDVLFDTTPNLVFKDRYLELTSSLPPPGRASLYGLGEQTKRTFRLQRNDTFTLWNSDIAAGNVDLNLYGSHPFYMDVRSGGGGGGGAAHGVLLLNSNGMDVIYGGSYVTYKVIGGVLDFYFFAGPSPLAVVDQYTQLIGRPAPMPYWSFGFHQCRYGYKNVADLEGVVAGYAKARIPLEVMWTDIDYMDAYKDFTLDPVNFPADRMRPFVDRLHRNGQKFVVIIDPGINVNTTYGTFVRAMKQDIFLKWNGSNYLGVVWPGNVYFPDFLNPRAAEFWAREIAAFRRTLPVDGLWVDMNEISNFVDPPPLNAIDDPPYRINNSGVRRPINNKTVPASAVHYGGVAEYDAHNLFGFLEARATHDALLRDTGRRPFVLSRSTFVGSGRYTAHWTGDNAATWEDLHYSINTMLSFGLFGIPMIGADICGFGGNTTEELCSRWIQLGAFYPFSRDHSAIGTVRRELYLWESVARSARKALGLRYRLLPYLYTLMYEAHTTGAPIARPLFFSYPGDVETYGIDRQFLLGRGVLVSPVLEPGATTVTAYFPAGRWFSLYDFSLAVATKTGKRVTLPAPVDTVNVHVAGGNILTLQQPALTSSRVRQSVVHLLVALADDGTATGDLFLDDGESPEMAGPRSRWSQIKFSGATESGGGVVRVRSHVVHDSYAPSRTMAIGKVVLMGLRSPAPPKGFAVYANGVQVNASTAVGGAAGSPEKGALGVAHVSGLTLVVGQEFDLKVVMTY</aaseq>

Gene Sequence

<dnaseqindica>1..231#1251..1282#2647..3308#3396..3626#3710..4350#4427..5323#ATGATGGGCTCGCCGCCGGCGCCGCCGGCGCGTCGTCTTGGCGCTCTCGCCGTCTTCTTGCTCGCTCTCTTCCTCGCCGCGCCGTGGGGCGTCGACTGCGGGTACAACGTCGCGTCGGTGGCCGGGTCGAAGAACCGGCTGAGGGCGCGGCTGGAGCTCGCCGGCGGCGGCGGCGGCGCCGCGCCGGAGCTCGGCCCCGACGTGCGGCGGCTCAGCCTGACAGCGAGGCAAGTATGATTAACCTTGCTTTTCAGCACTTATCTGAGATTTGCTAGGATCGATTGTTTAGTTCTTGAGCTCTCGAGGTTGATGCTTGATTGATCGTTAGCTACTTGATTATTAAGATAGATAGAGATGCTTAATTTGATCATCCACGTAGATAAACATAATCTGGGCTGCTTTCTTGGGGTTAGTTGGATTACTGTGGTTTCTTCAAGCCGAGGGAGTATTTTTTTAAAAAAAAAATATGTATTATAAATTCGCTCAAGCAGAGCTGCAGAGGGAGTTATTGAGACGTTGATTGATTTGATTATACTAGAATAGGACAACGTACCGAATGGAGTTGTAGTTAAGTCATCAGGAAGATAAGTACAGATTATATAATAACCAAGAAAGTCTAAAGGACTGATGAAGTGATGAAATAAATGGCAAAATATTTTAGAAAACTTTTAAAAAAAGATTAAAAAAGGAAAAATCCTAATACCCCCTACAACTCACTAGTGTTCTATTTTCTCCCTTACAACTCAATTTCATATATACAAACCCCTTTGCAACTTAATTTCATACGCAAACCGCTTCGACTCGTTTTATTGATACCTACAGTTGGATCGTACAAATAGGGAGAAATCACTGAAAAAGGAATATGGGGAAGTTAGAAGATAATTGACTTGTGTAGATTTTTATGTACGAAATTAATTTAAGGGGAAAGTAAAAATACATAAGAGCAGGTTTAATAATAGTATAGTCTTCTACCGGCGATAATTTTCTCCAGGTCATCTTAGAGCAGGTACAATAGCAGGCTATAAGCCAGCTGCAAACATATTTTAAGCAGATAAATAAGGAGAGAGAAAAGCAGCGGGCTACATATTCGTAGCCAGCTGTAGCACGGACTCCAAGACGTAGTGTGTGTATGACAGGTGGGACCATGTATTAATAATGTAGTATGTAACTATTGTATAAATGAGCTATTAAATTGGCTATAGATGAATTGGAGTTAGTAGTTGGCTATACTATTAAACTTGCTCTTATAGCCAGTGAAACACACTAGATTAGCTATAACATGGTAGGTTCCACAATACTGTTTTATTTTTTTATACCCATTAGCTCTCTCTCCCGAGTGCTTTTCTTCTTGGGTTTGGTGAGGTTAGCATGCATGCACAGAGCCTATTTTGGCTTCTGTGTGTAGCCCCGCTACAAATTAATCGCCCATTTCATCCTTTCTCTCTCCCATTAATCGTCTGTGGCTGTGTTTAGTTCATGGTAAAATTGAAAGTTTTGTTAAAATTAGAACGATGTAATGAAAAAATTAAAAGTTTGTGTGTGTGAAAGTTTTGATGTGATAAAAAAGTTGAAAGTTTTAAGAAAAACTTTGAAACTAAACACAGCCACAATTAATGTGGAGCTTTTGCAGCATGTTGATATCACCTTGTTGTATCTGTTCTAAGAGCAAGTTAATAGAGCCGCCGGCTGCCAGTTGCAAAATAATACACCTCAGCAAAAGTAAATAAAAAGAAGAAATACTACTTAAGCTAATCATAGTTACTTTTAATATTTTATTCAACTAACTGTGTGCATCACTCGGCTTAGCTCCATCCAATTGGCTGGCCATGCCCTCCCACTTGTGGGCCCCACCACTTTGCGTTGGAGGCTGTGCTAGAGCTAGCGCTAACTGAAGGGGAAACTGTTTTAAACACTCGGGTGGACGTCCACCCGTTTCTTGCATGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTGTGAATATACGTATACTAGTTAGAGTTTGATTTGTTATTTTCGTTACCACTTGTAAAAGTCAAATTTGAACTTGTATGTTTGTGAAGTGATATATTACATATTAACCTATCTTGTGATTTTTTTTGAAATTTTTTCATAATTATTCTGGTGGCATGCAAGAAACGGGTGGACGTCCACCCGAGAGATTAGAATCCATCCTCCTGACTGAAGTGCTCGCCTTTGCCTTTCCTAACCTTCTCTCCCTTCCATGTCAGCACTGATATAATATTTAAAATCTTACCGCCTACTATTATATTATACCTGCTCTAAGGGAGTATTTGGATTCTCGAATGGAAGAAAGGTGAAAAAGCTTATCATAGAAGCGCCAGAATATTTTTGGGAAATAAAAAACCGAAAAAAGAAAGGCTAAAACAGAAAAAGAATCGCAAAAACATCTCAAAAACTTGTTGCTCGATCACGGTGGGGACTAGATTCCGGAGGCGAGCGCTGCAAACTCGATTCCACAATCCATTAGGCCACGCGACCACTGCAAAATTGACCCTAATTACTATCTATAGTCACCGTTATTTTATTATTTTATTTTTGGCTCGCCGGCGGCAGCCTGGAGACGGACAGCCGGCTACACGTCCGCATCACCGACGCCGACCACCCTCGATGGGAGGTGCCCCAGGACGTCATCCCGCGCCCCTCGCCGGACTCCTTCCTCGCCGCCACACGCCCAGGCGGCGGCCGCGTCCTCTCCACGGCGACCTCCGACCTCACCTTCGCCATCCACACCTGCCCGTTCCGCTTCACCGTCACCCGCCGCTCCACCGGCGACGTCCTCTTCGACACCACCCCAAACCTCGTCTTCAAGGATCGCTACCTCGAGCTCACCTCCTCGCTGCCGCCGCCCGGCCGCGCGTCGCTGTACGGCCTCGGCGAGCAGACCAAGCGCACGTTCCGGCTCCAGCGGAATGACACCTTCACGCTCTGGAACTCCGACATCGCCGCCGGCAACGTCGACCTCAACCTGTACGGCTCCCACCCCTTCTACATGGACGTGCGCTCCGGCGGCGGCGGCGGCGGCGGCGCGGCGCACGGCGTGCTCCTCCTTAACAGCAACGGCATGGACGTCATCTATGGCGGATCCTACGTCACCTACAAGGTGATCGGCGGCGTGCTGGATTTCTACTTCTTCGCCGGCCCGTCCCCTCTCGCCGTCGTCGACCAGTACACCCAGCTCATCGGCCGACCTGCCCCCATGCCGTACTGGTCATTCGGTAAGCTAGCTCTCTGTTTTGCTCTGCTTCTTCAGTTCTTCTTGCTTGATCTCGCCGCCGCCGACATTGTCGCGTTCGTCGTTGCAGGGTTCCACCAGTGCAGGTACGGGTACAAGAACGTGGCTGATCTTGAGGGCGTCGTCGCCGGCTACGCCAAGGCGAGGATCCCACTGGAGGTGATGTGGACGGACATCGATTACATGGACGCCTACAAGGACTTCACGCTTGATCCGGTGAACTTCCCGGCCGACCGGATGCGGCCGTTCGTCGACCGCCTCCACCGCAACGGCCAGAAGTTCGTCGTCATCATTGACCCAGGTACGTACACAAGCTCGATCGATCGCGTCAATGGCGAAATCTCGGTGATCGATGACGTCATCAATGGCGGGTTGTGTTTGTAGGGATCAACGTGAACACGACGTACGGGACGTTCGTCCGGGCAATGAAGCAGGACATCTTCTTGAAGTGGAACGGGAGCAACTACCTCGGCGTGGTGTGGCCGGGGAACGTCTACTTCCCGGACTTCCTCAACCCGCGCGCCGCCGAGTTCTGGGCGCGCGAGATCGCCGCGTTCCGGCGGACCCTCCCCGTCGACGGGCTGTGGGTCGACATGAACGAGATCTCCAACTTCGTCGACCCGCCGCCGCTCAACGCGATCGACGACCCGCCGTACCGCATCAACAACTCCGGCGTGCGCCGCCCCATCAACAACAAGACGGTGCCGGCCTCCGCCGTGCACTACGGCGGCGTGGCCGAGTACGACGCGCACAACCTCTTCGGCTTCCTCGAGGCGCGGGCCACGCACGACGCGCTGCTCCGTGACACCGGCCGCCGGCCGTTCGTGCTCAGCCGCTCCACGTTCGTCGGCTCCGGCAGGTACACCGCGCACTGGACCGGCGACAACGCCGCGACGTGGGAGGACCTCCACTACTCCATCAACACCATGCTCAGCTTCGGCCTCTTCGGCATCCCCATGATCGGCGCCGACATCTGCGGCTTCGGCGGCAACACCACCGAGGAGCTCTGCAGCCGCTGGATTCAGGTAACAAAACACGTCGAGCTCTCGTGTCCTCCATTAATGGCGTAAGTAAGTTTGAGCTTGTTTTGTGCGTTTGAAGCTTGGCGCGTTCTACCCGTTCTCGAGGGATCACTCGGCGATCGGCACCGTCCGGCGAGAGCTGTACCTGTGGGAGTCGGTGGCGAGGTCGGCGAGGAAGGCGCTCGGCCTGCGCTACCGGCTGCTCCCCTACTTGTACACGCTCATGTACGAGGCGCACACCACCGGCGCGCCCATCGCGCGGCCGCTCTTCTTCTCCTACCCCGGCGACGTCGAGACGTACGGCATCGACAGGCAGTTCCTGCTCGGGCGCGGCGTGCTCGTGTCGCCGGTGCTCGAGCCGGGCGCGACCACCGTCACCGCCTACTTCCCGGCCGGACGGTGGTTCAGCCTCTACGACTTCTCCCTCGCCGTCGCCACGAAGACCGGCAAGCGCGTGACGCTGCCCGCGCCGGTGGACACGGTGAACGTGCACGTCGCCGGCGGGAACATCCTGACGCTGCAGCAGCCCGCGCTGACGTCGTCGCGCGTGCGCCAGAGCGTGGTCCACCTCCTGGTCGCGCTCGCCGACGACGGCACGGCCACCGGGGATCTCTTCCTGGACGACGGCGAGTCGCCGGAGATGGCCGGGCCGCGGAGCAGGTGGAGCCAGATCAAATTCAGCGGCGCGACCGAGAGCGGCGGCGGCGTGGTCAGAGTGAGGTCGCATGTGGTGCACGACTCGTACGCGCCGAGCCGGACGATGGCCATCGGCAAGGTGGTGCTCATGGGGCTCCGGTCGCCGGCGCCGCCCAAGGGGTTCGCCGTTTATGCCAACGGCGTCCAGGTGAACGCGAGCACGGCGGTCGGCGGCGCCGCCGGGAGCCCGGAAAAGGGAGCGCTGGGCGTCGCGCACGTCAGCGGGCTGACGCTGGTCGTCGGGCAGGAGTTCGATCTCAAGGTCGTGATGACCTATTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA020688