BGIOSGA020709

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Revision as of 12:50, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA020709| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA020709, complete gene.| tag = OsI_240...")
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Gene Name

BGIOSGA020709

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA020709, complete gene.

LocusTag

OsI_24056

Ensembl Transcript ID

BGIOSGA020709-TA

Ensembl Protein ID

BGIOSGA020709-PA

Length

4694

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:29445303..29449996

Sequence Coding Region

29449709..29449996,29448672..29448761,29448447..29448566,29448257..29448358,29447919..29448169
,29447618..29447763,29447249..29447447,29446471..29447137,29445842..29446174
,29445303..29445584

Genome Context

<gbrowseImage1> name=IndicaChromosome06:29445303..29449996 source=RiceIndica06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome06:29445303..29449996 source=RiceIndica06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGTGGTGGTGGACGCGTCGGAGTTCGGGGCGGAGGGGTTCGACCCGAAGCGGTGGATCAACGCGGCGCTGGACGCGCGCCACCCGTCGGAGCCGCTCGACCGCTTCCTCGCCGACGCCGAGGAGCGCCTCCGCTCGGCCGCCGACGACGCCGCGGCCGCGCTCGAGCGGGACAGCGCCGACGCGCTCCGCCGCGTCCCGCTCGCCTGCCGCGACGCGCTCCGCCTCCGCGACGACGCCGTCTCGCTCCGGTCCCATCTCGCCTCCGTCCTCCAGTCGCTCTCCCAGGCTGAGGGCTCATCTGCAGAGTCAATAACTGCACTAGCACGAATTGATACTGTGAAACAACGAATGGAAGCGGCGTATGCAACATTACAGGATGCGGCTGGACTAGCTCAGTTGAGCCAAAGTGTTGAGGATGTATTTTCTAGTGGTGATCTTCCAAAAGCTGCAGAAACCCTGGCAACCATGAGACATTGCTTGTCGGCAGTTGGTGAGGTTGCGGAGTTCGCTAATGTGAGAAAGCAGCTTGAAGTATTGGAAGAACGGCTAGATGACATGGTTCAACCTCGTTTGGTGGATGCACTTTCTAACCGCAAGGTCGATGCTGTGCAAGATCTTCGTGGAATACTGATACGTATTGGCAGATTCAAGTCACTGGAGGTGCAATATACTAAGATCCATGTCAAGCCTCTAAAGAAACTTTGGGAAGATTTTGATCTAAAACAGAGAGCTAAGCGGGTAGAGATGGAGAAGTATGGTGGAGAAAGCATAAACAGTCTCTCATTTGCTAGCTGGCTTCCAAATTTCTATGATGAGACACTACTTTACCTTGAACAAGAATGGAAGTGGTGCCTGACTGCTTTCCCTGAAGAATACAAATCACTAGTCCCAAAAGTACTTGTTGAAACCATGAGTGAGTTGAATTCAAGTTTTGTCTCTCGTGTCAACCTAGCAACTGGAGATGCTGTTCCTGAAACTAGATCTGTTGCAAAAGGTATACTAGATGTTTTATCAGGTGACTTGCCAAAAAGTACCAAATTGCAGAATAAGCATCTTGGAGCACTGATCGACCTGCACAACATGACGGGCACTTTTGCTCGGAACATCCAACATTTATTTTCAGAGTCAGATCTTTTAGTTCTGCTGAATACATTGAAAGCTATTTATTCCCCATATGAGACTTTTAAAGCAAGGTATGGGCAAATGGAGCGTGCTTTACTTTCTGCTGAGATGGCTGGTATAGATATCCGTGGGGCCATTGCTCGTGGTGTGGGTGCACAGGGTATAGAGCTGAGTGAAACTGTTCGTAGAATGGAGGAATCCATCCCACAAATTATAGTGCTTCTTGAAGCAGCTGTCGAGAGATGCATTAGTCTTACTGGTGGTTCAGAGGCAGATGAACTGGTATTGGCTCTAGATGACATTATGCTGCAGTACATATCAAACCTACAAGAAACTTTAAAATCCCTTAGGATTGTATGTGGGGTGGATAATACTGCACATAGTGATTCCTCTAAAAAGGAAGCAGGACTAGAGAAAAAAGAAGCACAACGATTGGTCGATGTCTCTGAAGAGGAAGAATGGTCTATTGTCCAGGGTGCTTTGCAGATTCTTACAGTTGCTGATTGCCTAACTAGCAGAACCTCAGTTTTTGAAGCTTCTTTAAGGGCTACTCTTGCCAGGATTGGAACCAACTTTTCTATTTCTGGTTTTGGTTCTAGCCTAGATAAATCAACTGCAGCAAATGGTGATGAGAATGCAGAAGTGCCTATCACAGGGAGGGCAGCACTTGATATTGCAGCTATTCGCCTCACCGATCTACCAGACAAGTCTAAGAAGCTCTTCACTGTACTAGAACAGTCAAAAGATCCAAGGTTCCATGCTCTACCTCTGACATCACAAAGAGTTGCGGCCTTCTCAGACACAGTAAATGAACTCGTCTATGACGTGCTCATATCTAAAGTCCGACAGCGTCTCAATGAGGTTGCTCGCCTCCCAATTTGGTCATCGGTGGAGGAACCAGGTGGCCTTCCCCTTCCAAGCTTCAGTGCCTACCCGCAGGCATATGTGACCAGTGTTGGGGAGTATCTCCTAACTTTACCCCAGCAGTTGGAGCCACTTGCAGAAGGTATCTCAGGCGGTGAGGCTGGCAACGAGGAGGCTCAGTTCTTTGCTACTGAATGGATATTTAAGGTCGCGGAAGGCGCCACCGCGCTGTTCATGGAGCAGCTGCGAGGGATCCATTACATCACCGACCGAGGCGCGCAGCAGCTGGCGGCGGACATAGAGTACCTGAGCAACGTCCTCTCGGCGCTGTCCATGCCGATCCCACCCTTCCTCGCCACCTTCCACACCTGCATCTCCACCCCGAGAGACCAGGTCCGCGACCTCATCAAGTCTGACGGCGGCAGCCAGCTCGACCTCCCCACCGCCCATCTGGTCTGCAAGATCCGGCGCATCTCGTCATCAGATTAG</cdnaseq>

Protein Sequence

<aaseq>MVVVDASEFGAEGFDPKRWINAALDARHPSEPLDRFLADAEERLRSAADDAAAALERDSADALRRVPLACRDALRLRDDAVSLRSHLASVLQSLSQAEGSSAESITALARIDTVKQRMEAAYATLQDAAGLAQLSQSVEDVFSSGDLPKAAETLATMRHCLSAVGEVAEFANVRKQLEVLEERLDDMVQPRLVDALSNRKVDAVQDLRGILIRIGRFKSLEVQYTKIHVKPLKKLWEDFDLKQRAKRVEMEKYGGESINSLSFASWLPNFYDETLLYLEQEWKWCLTAFPEEYKSLVPKVLVETMSELNSSFVSRVNLATGDAVPETRSVAKGILDVLSGDLPKSTKLQNKHLGALIDLHNMTGTFARNIQHLFSESDLLVLLNTLKAIYSPYETFKARYGQMERALLSAEMAGIDIRGAIARGVGAQGIELSETVRRMEESIPQIIVLLEAAVERCISLTGGSEADELVLALDDIMLQYISNLQETLKSLRIVCGVDNTAHSDSSKKEAGLEKKEAQRLVDVSEEEEWSIVQGALQILTVADCLTSRTSVFEASLRATLARIGTNFSISGFGSSLDKSTAANGDENAEVPITGRAALDIAAIRLTDLPDKSKKLFTVLEQSKDPRFHALPLTSQRVAAFSDTVNELVYDVLISKVRQRLNEVARLPIWSSVEEPGGLPLPSFSAYPQAYVTSVGEYLLTLPQQLEPLAEGISGGEAGNEEAQFFATEWIFKVAEGATALFMEQLRGIHYITDRGAQQLAADIEYLSNVLSALSMPIPPFLATFHTCISTPRDQVRDLIKSDGGSQLDLPTAHLVCKIRRISSSD</aaseq>

Gene Sequence

<dnaseqindica>1..288#1236..1325#1431..1550#1639..1740#1828..2078#2234..2379#2550..2748#2860..3526#3823..4155#4413..4694#ATGGTGGTGGTGGACGCGTCGGAGTTCGGGGCGGAGGGGTTCGACCCGAAGCGGTGGATCAACGCGGCGCTGGACGCGCGCCACCCGTCGGAGCCGCTCGACCGCTTCCTCGCCGACGCCGAGGAGCGCCTCCGCTCGGCCGCCGACGACGCCGCGGCCGCGCTCGAGCGGGACAGCGCCGACGCGCTCCGCCGCGTCCCGCTCGCCTGCCGCGACGCGCTCCGCCTCCGCGACGACGCCGTCTCGCTCCGGTCCCATCTCGCCTCCGTCCTCCAGTCGCTCTCCCAGGTGCGCCCCCGCTCGCCTGCTAGTTGGATCTGGATCTCACAGTTCACTCGTGCACAATTGTACGTGTATCACGCGAAACCCAGATCATTTTGGAGGATTACGAACTTGCGATAATAGTTGGTGCGAATGAGCAAATGTTGAACCAATTTGGCACAATAGGTTTTAGTTTGATTCATTTATGCGTATGATTCAGCCTCTGGCCGCTTTTAGTACCCCCCGTTTTTTCACTTGGATCTGGATCTCACGTACTGTATTTGGTCATGTCAATTTTATCCTTGTACGCTTTGCATTGAACAGTGCGTACAACTAGAACTGTATTTAGTCATGTCAATTTTATCGCTGTACGCTTTTATCAAATGATATGTTAATTTGATCATCTCTGTTAACTGAAACTGAAGTCAGAATTTGCGTGGGCTTGGCAAAACCAAGCTGGAGCTCTGTTGGCAAAATCCTTGCATGTGTCGGGATGTTATAATGCTGTGTACTTATGCAATGCAGTTATGTGCATGTAAACTTTGAGTATGCTGTAGAGGACATTCAAATCCAGCAGTTCAGTGATGCCCATAAAACTATGCCTATAGTCTATTATAATGGAATACCGTCACTTATATCATTTAGTTCATATAGGTGATAGGTCAGGATGCTACATCAAATCACAAGCAAAACATTTTCTCCTGTAGCATGTACTTCTTGTTACGTGTAGCGTTATCTTCTCATAACATTTAGCTTGACATTTTGTAGAATACACTGGAATGAATTTGCTAGCACTAGAACTTTTTTTTTTGGGTACTGAGTGATTCCTTCTTTGTAACGGCCAATGCTGAATACTGGGTGTTAATGAATGAAATATGACATACATATGCATGTATGATCAACTAACTAGGTATTCAGTCCCATCTACATTTCATAAATTCTGTATTACTGATGATGATGATTTCTTCAATCAGGCTGAGGGCTCATCTGCAGAGTCAATAACTGCACTAGCACGAATTGATACTGTGAAACAACGAATGGAAGCGGCGTATGCAACATTACAGGTAAGTTGTATGTGGACTATGGTGCATGTTACTGAAGTAAATGCTTCACTCACAGTGGTAGGTTATCTTTTAATAGATTTAACAGCTTGTTGGTCGGAATGCCAGGATGCGGCTGGACTAGCTCAGTTGAGCCAAAGTGTTGAGGATGTATTTTCTAGTGGTGATCTTCCAAAAGCTGCAGAAACCCTGGCAACCATGAGACATTGCTTGTCGGCAGTTGGTGAGGTATTGTACTCTCTCACACAAACATGCACAGTACACTGAGTTTATATGCAGAAGCTATTTGTTTTGCTTATATAAAAGTTGCTTTCAGGTTGCGGAGTTCGCTAATGTGAGAAAGCAGCTTGAAGTATTGGAAGAACGGCTAGATGACATGGTTCAACCTCGTTTGGTGGATGCACTTTCTAACCGCAAGGTTTTTCTTACTAATCTCATTTATATTTGTTAAACAGTAGTACAGGCATCTCTATTTCATCTAAAGCCTACAAATTTTGGTTGGAAGGTCGATGCTGTGCAAGATCTTCGTGGAATACTGATACGTATTGGCAGATTCAAGTCACTGGAGGTGCAATATACTAAGATCCATGTCAAGCCTCTAAAGAAACTTTGGGAAGATTTTGATCTAAAACAGAGAGCTAAGCGGGTAGAGATGGAGAAGTATGGTGGAGAAAGCATAAACAGTCTCTCATTTGCTAGCTGGCTTCCAAATTTCTATGATGAGACACTACTTTACCTTGAACAAGAATGGAAGTGGTATGTTCATTGTACCCTGTTGTCTTTTGTTCTGAATCAGCAATGTTTGCCCTTGTAAACAGAAGCCAGTTTTTGGCAGCATCTTTTAGCTGCATTCGGACAATATTTTTGCTCCACCAAAAATTAATGGATGTTCTACAATGCTAATGCTGAAGGTGCCTGACTGCTTTCCCTGAAGAATACAAATCACTAGTCCCAAAAGTACTTGTTGAAACCATGAGTGAGTTGAATTCAAGTTTTGTCTCTCGTGTCAACCTAGCAACTGGAGATGCTGTTCCTGAAACTAGATCTGTTGCAAAAGGTAATGCATAAACTTCTCGTATTATTTCATTTTTGTATGTCTATACTAATTTCATGATTGAATTACATGTTTTATTTTTCTCTGTTCAATTAAAAAAGGATATTACTTGTTTGCCACATATGCGTACTTCTTTCGTAACAATAAATTGATTTTATGTCCTCTGTACCCAGGTATACTAGATGTTTTATCAGGTGACTTGCCAAAAAGTACCAAATTGCAGAATAAGCATCTTGGAGCACTGATCGACCTGCACAACATGACGGGCACTTTTGCTCGGAACATCCAACATTTATTTTCAGAGTCAGATCTTTTAGTTCTGCTGAATACATTGAAAGCTATTTATTCCCCATATGAGACTTTTAAAGCAAGGTAAAAAAAAAACTTGTGAAAAATTCTGTTGCATGCAGTTAACTGCATTGGTGAGATTTTTTTTGTTGCTATTGCTGTAGTACTCAGCCAGTGGTGTTTCATGCTATGTAGGTATGGGCAAATGGAGCGTGCTTTACTTTCTGCTGAGATGGCTGGTATAGATATCCGTGGGGCCATTGCTCGTGGTGTGGGTGCACAGGGTATAGAGCTGAGTGAAACTGTTCGTAGAATGGAGGAATCCATCCCACAAATTATAGTGCTTCTTGAAGCAGCTGTCGAGAGATGCATTAGTCTTACTGGTGGTTCAGAGGCAGATGAACTGGTATTGGCTCTAGATGACATTATGCTGCAGTACATATCAAACCTACAAGAAACTTTAAAATCCCTTAGGATTGTATGTGGGGTGGATAATACTGCACATAGTGATTCCTCTAAAAAGGAAGCAGGACTAGAGAAAAAAGAAGCACAACGATTGGTCGATGTCTCTGAAGAGGAAGAATGGTCTATTGTCCAGGGTGCTTTGCAGATTCTTACAGTTGCTGATTGCCTAACTAGCAGAACCTCAGTTTTTGAAGCTTCTTTAAGGGCTACTCTTGCCAGGATTGGAACCAACTTTTCTATTTCTGGTTTTGGTTCTAGCCTAGATAAATCAACTGCAGCAAATGGTGATGAGAATGCAGAAGTGCCTATCACAGGGAGGGCAGCACTTGATATTGCAGCTATTCGCCTCACCGATCTACCAGACAAGTCTAAGAAGCTCTTCACTGTACTAGAACAGGCAAGTTATATATTTTTAAATTATCTTGCTAGTGTCACAACACTAGAGTTATCACATGTTTCTCTGATTTGTTTGAACAGCCTGATTGCAAACTTAGGTGGTAGTATTAAGCTAGATTATCTGGTTTTATAGGAAATTCGGAGATCTTTTTTAGCTTTCCTTTTCTATTATGCATTTTTTTAAGCTACTCATATGTGGCATAGAACCTATTTTTTGACCTATAATTTCCCAAGTATCACAAGTAACTCTTTGTTTGTCTTCATGGCTAATTTAAAGATAACATTTCTGTTATACAGTCAAAAGATCCAAGGTTCCATGCTCTACCTCTGACATCACAAAGAGTTGCGGCCTTCTCAGACACAGTAAATGAACTCGTCTATGACGTGCTCATATCTAAAGTCCGACAGCGTCTCAATGAGGTTGCTCGCCTCCCAATTTGGTCATCGGTGGAGGAACCAGGTGGCCTTCCCCTTCCAAGCTTCAGTGCCTACCCGCAGGCATATGTGACCAGTGTTGGGGAGTATCTCCTAACTTTACCCCAGCAGTTGGAGCCACTTGCAGAAGGTATCTCAGGCGGTGAGGCTGGCAACGAGGAGGCTCAGTTCTTTGCTACTGAATGGATATTTAAGGTAATATATTCAAAGCATTTTTTTTCATCATGCTGTGTACATTCGCAACATACCATCGACAAAACCATTCATACTTCACACTGCGACTTTCGCAAATTCCGTACAGAAGAGTTGACCATTTAGAACTACATGCATTGCAACTGAATACAACATTACATAAAACCCCAATAATCTGACCACAACATAAACACCGAACCCAAATCTTTTGATGAATTAATCTAGAACTGTCTCTGATCTCTGTTTCCATGATGAACCAGGTCGCGGAAGGCGCCACCGCGCTGTTCATGGAGCAGCTGCGAGGGATCCATTACATCACCGACCGAGGCGCGCAGCAGCTGGCGGCGGACATAGAGTACCTGAGCAACGTCCTCTCGGCGCTGTCCATGCCGATCCCACCCTTCCTCGCCACCTTCCACACCTGCATCTCCACCCCGAGAGACCAGGTCCGCGACCTCATCAAGTCTGACGGCGGCAGCCAGCTCGACCTCCCCACCGCCCATCTGGTCTGCAAGATCCGGCGCATCTCGTCATCAGATTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA020709