BGIOSGA020717

From RiceWiki
Revision as of 12:50, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA020717| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA020717, complete gene.| tag = P0686E0...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA020717

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA020717, complete gene.

LocusTag

P0686E06.7-1

Ensembl Transcript ID

BGIOSGA020717-TA

Ensembl Protein ID

BGIOSGA020717-PA

Length

1676

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:29375160..29376835

Sequence Coding Region

29376742..29376835,29375733..29375821,29375378..29375548,29375160..29375288

Genome Context

<gbrowseImage1> name=IndicaChromosome06:29375160..29376835 source=RiceIndica06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome06:29375160..29376835 source=RiceIndica06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCCGCCGCCGCCGCCGCCTCAAGGGCGCTCTGGGCTTGCCGCACCGCCTCCTACCTTCGGATCTCCTCCTTCCCCAGGGCTTTCTCCACCGTCCTTAAAGATCTAAAATATGCTGATACTCATGAGTGGGTGAAGGTTGAGGGTGATTCAGCAACCATAGGGGTCACAGACCATGCTCAGGACCATTTGGGTGATGTTGTGTATGTTGAGCTTCCAGAAGTTGGTTCCACAGTATCACAAGGAACGAACTTTGGTGCGGTTGAAAGTGTGAAAGCAACCAGTGATATCAATGCACCAGTATCTGGAGAGATTATTCAAGTAAATGATGAACTAAGTGAAAAACCAGGATTTATAAATGGAAGTCCATATGAGAAGGGATGGATCATCAAGGTTAAGATAAGTGATCCAAGTGAGTTAAACTCGCTGATGGATGATGAGAAGTACAAGAAGTTTTGTGAGGAAGAAGATGGCAAACACTGA</cdnaseq>

Protein Sequence

<aaseq>MAAAAAASRALWACRTASYLRISSFPRAFSTVLKDLKYADTHEWVKVEGDSATIGVTDHAQDHLGDVVYVELPEVGSTVSQGTNFGAVESVKATSDINAPVSGEIIQVNDELSEKPGFINGSPYEKGWIIKVKISDPSELNSLMDDEKYKKFCEEEDGKH</aaseq>

Gene Sequence

<dnaseqindica>1..94#1015..1103#1288..1458#1548..1676#ATGGCCGCCGCCGCCGCCGCCTCAAGGGCGCTCTGGGCTTGCCGCACCGCCTCCTACCTTCGGATCTCCTCCTTCCCCAGGGCTTTCTCCACCGGTATGGCATCTGCCCCCTCTCCTGCTTTGCCATTTTGTCCTCCCTCCTGCTTAGTATTTTGCCTGTATTATATGTGTAGTTGTGTACTGTTTGTGGTATGGGGAATTGGGGATCAAAGGCTCTGCGCGTTGGGACGGGGTGACTCGGCTGTTTCTACCCTAATTATCGGGTTTCGGGAGGAAGTATGCTGTTAAATCTGAAATTTTGTGATGTTTTTGCTTCACTGCTTGTGTGCGCGCGTCACAGATTTGCGCAGTTCGTTTGCAGGAGACTTTCGTATGTAAAGTATAGCGGTGACCCGATAGTTCATTGTGAGGCATGTCGATCGTTTATATCAGGGAGGAGGATTAGGTCTAATGTTAGGGTTATTTGTTTTTGATGGCTTGATGCACCATTCTAGACTTTCTAGTTGCTAGTTCCTTCTTGGGGTGTTCATTAGTTCATAGGCAAGACTCTGCACCGATTGGATGACTGAAATGTGAATTACCCTTTTGGTTATTGAGAATTTGAGATGATGAAATGTGCAGATGATTTATGGAATTACAGTGTAGGGCTTCCAAAAATTGGTACTAGACTGCAAATTACATCTTGCTAGATTACACAGGCAACACAACATATATGCGGATTACATTTCTATTCCATATGTAGTGGTTATAGTTGTTTCTATTTCAGAAATAAAAATAGGTGATCCCAAGAGAAGGTGGTCATGCACCTTGTGCCATATTTGTTTTCTCAACTTGGTTTTATGTTTCTTCAAAACATCTTTTTAGATTTTTCCAGTGTACTGCTACTGCATCCCTCTAGCGTATCTAACTGATTGGAGCATTTACTGAAACTTTTCAAATGAATACAATATCCATTGCTTCGCTGTCAGCCTATCACTCTAATAAGTAATGCATATTTGTTTTCCTGCTTGGCAGTCCTTAAAGATCTAAAATATGCTGATACTCATGAGTGGGTGAAGGTTGAGGGTGATTCAGCAACCATAGGGGTCACAGACCATGCTCAGGTAATCAGTTTGATACATTTGCAAGCTGCACCAGCATTTTATCAGCCTTCAATATGCTATATTACTGGGTCTCTTGCTGAGTTGATAACTTCAACGTGTTATTGACATGCATTACAGCATTTTTCCTCAAAATAGAATTTTCTGTGATAGTGTGATGGCTTAATATGTCCTGTTTCAATTCCAGGACCATTTGGGTGATGTTGTGTATGTTGAGCTTCCAGAAGTTGGTTCCACAGTATCACAAGGAACGAACTTTGGTGCGGTTGAAAGTGTGAAAGCAACCAGTGATATCAATGCACCAGTATCTGGAGAGATTATTCAAGTAAATGATGAACTAAGTGAAAAACCAGGATTTGTGAGTCGCAATTGCTACCCTTGCTAGACTAATTTTTGAGTAATCACTGCTATGTTCAGTTGACAATTTGCTTCTGCAATTTTACACAGATAAATGGAAGTCCATATGAGAAGGGATGGATCATCAAGGTTAAGATAAGTGATCCAAGTGAGTTAAACTCGCTGATGGATGATGAGAAGTACAAGAAGTTTTGTGAGGAAGAAGATGGCAAACACTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA020717